RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 CCDC9Q9Y3X0 531 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 ITSN1Q15811 1721 aa16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 NPHP1O15259 732 aa16.28■□□□□ 0.2
SEMA4D-217ENST00000475255 CACTINQ8WUQ7 758 aaKnown RBP16.28■□□□□ 0.2
SEMA4D-217ENST00000475255 ECHDC1Q9NTX5 307 aa16.28■□□□□ 0.2
SEMA4D-217ENST00000475255 CCDC171Q6TFL3 1326 aa16.28■□□□□ 0.2
SEMA4D-217ENST00000475255 A0A0D9SFI3 127 aa16.28■□□□□ 0.2
SEMA4D-217ENST00000475255 PLEKHG3A1L390 1219 aa16.28■□□□□ 0.2
SEMA4D-217ENST00000475255 NECTIN1Q15223 517 aa16.28■□□□□ 0.2
SEMA4D-217ENST00000475255 LRRC2Q9BYS8 371 aa16.28■□□□□ 0.2
SEMA4D-217ENST00000475255 C9orf78Q9NZ63 289 aaPredicted RBP16.28■□□□□ 0.2
SEMA4D-217ENST00000475255 NRXN3Q9Y4C0 1643 aa16.28■□□□□ 0.2
SEMA4D-217ENST00000475255 PRAMEF22A3QJZ6 481 aa16.27■□□□□ 0.2
SEMA4D-217ENST00000475255 PROSER3Q2NL68 480 aa16.27■□□□□ 0.2
SEMA4D-217ENST00000475255 FTOQ9C0B1 505 aaKnown RBP eCLIP16.27■□□□□ 0.2
SEMA4D-217ENST00000475255 ZSCAN25Q6NSZ9 544 aa16.27■□□□□ 0.2
SEMA4D-217ENST00000475255 ZNF771Q7L3S4 317 aaPredicted RBP16.27■□□□□ 0.2
SEMA4D-217ENST00000475255 RUFY2Q8WXA3 655 aa16.27■□□□□ 0.2
SEMA4D-217ENST00000475255 ANKRD7Q92527 254 aa16.27■□□□□ 0.2
SEMA4D-217ENST00000475255 SETD1BQ9UPS6 1966 aaKnown RBP16.27■□□□□ 0.2
SEMA4D-217ENST00000475255 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
SEMA4D-217ENST00000475255 USP27XA6NNY8 438 aa16.27■□□□□ 0.19
SEMA4D-217ENST00000475255 SLC27A2O14975 620 aa16.27■□□□□ 0.19
SEMA4D-217ENST00000475255 TPD52L1Q16890 204 aaPredicted RBP16.27■□□□□ 0.19
SEMA4D-217ENST00000475255 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 ZNF165P49910 485 aa16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 ZNF75DP51815 510 aa16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 AIMP1Q12904 312 aaKnown RBP16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 PGBD1Q96JS3 809 aa16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 LTKP29376 864 aa16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 LEO1Q8WVC0 666 aaPredicted RBP16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 ZSCAN31Q96LW9 406 aaPredicted RBP16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 SH2B1Q9NRF2 756 aaPredicted RBP16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 TRMT1Q9NXH9 659 aaKnown RBP16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 AKAP12Q02952 1782 aa16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 KDRP35968 1356 aa16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
SEMA4D-217ENST00000475255 HOXC9P31274 260 aa16.25■□□□□ 0.19
SEMA4D-217ENST00000475255 UTP14CQ5TAP6 766 aaKnown RBP16.25■□□□□ 0.19
SEMA4D-217ENST00000475255 ZNF589Q86UQ0 364 aaPredicted RBP16.25■□□□□ 0.19
SEMA4D-217ENST00000475255 MPRIPQ6WCQ1 1025 aa16.25■□□□□ 0.19
SEMA4D-217ENST00000475255 EAF2Q96CJ1 260 aaPredicted RBP16.25■□□□□ 0.19
SEMA4D-217ENST00000475255 FSD1Q9BTV5 496 aa16.25■□□□□ 0.19
SEMA4D-217ENST00000475255 CLIP2Q9UDT6 1046 aa16.25■□□□□ 0.19
SEMA4D-217ENST00000475255 MAP3K2Q9Y2U5 619 aa16.25■□□□□ 0.19
SEMA4D-217ENST00000475255 USP31Q70CQ4 1352 aa16.25■□□□□ 0.19
SEMA4D-217ENST00000475255 BLOC1S2Q6QNY1 142 aa16.25■□□□□ 0.19
SEMA4D-217ENST00000475255 CTIFO43310 598 aaKnown RBP16.24■□□□□ 0.19
SEMA4D-217ENST00000475255 FILIP1Q7Z7B0 1213 aa16.24■□□□□ 0.19
SEMA4D-217ENST00000475255 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
SEMA4D-217ENST00000475255 EIF4A1P60842 406 aaKnown RBP16.23■□□□□ 0.19
SEMA4D-217ENST00000475255 RBM33Q96EV2 1170 aaKnown RBP16.23■□□□□ 0.19
SEMA4D-217ENST00000475255 USP16Q9Y5T5 823 aa16.23■□□□□ 0.19
SEMA4D-217ENST00000475255 TOB2Q14106 344 aaPredicted RBP16.23■□□□□ 0.19
SEMA4D-217ENST00000475255 C11orf57Q6ZUT1 292 aaPredicted RBP16.23■□□□□ 0.19
SEMA4D-217ENST00000475255 CCDC129Q6ZRS4 1044 aa16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 TAOK2Q9UL54 1235 aa16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 EPB41L2O43491 1005 aaKnown RBP16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 ABTB2Q8N961 1025 aa16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 CCDC112Q8NEF3 446 aa16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 BRF1Q92994 677 aa16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 TTC41PQ6P2S7 1318 aa16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 SASH1O94885 1247 aa16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 TPM3P06753 285 aa16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 MAP4K1Q92918 833 aa16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 EVI5LQ96CN4 794 aa16.22■□□□□ 0.19
SEMA4D-217ENST00000475255 ADCY9O60503 1353 aa16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 HSP90B1P14625 803 aaKnown RBP16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 CGNQ9P2M7 1197 aaKnown RBP16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 NAP1L2Q9ULW6 460 aaPredicted RBP16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 CEBPAP49715 358 aaPredicted RBP16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 GUCY1B3Q02153 619 aa16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 SLFNL1Q499Z3 407 aa16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 PLA2G4DQ86XP0 818 aa16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 GTPBP4Q9BZE4 634 aaKnown RBP16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 TM6SF1Q9BZW5 370 aa16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 CLSTN2Q9H4D0 955 aa16.21■□□□□ 0.19
SEMA4D-217ENST00000475255 HSP90AB4PQ58FF6 505 aa16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 LRRC59Q96AG4 307 aaKnown RBP16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 SUCLG2Q96I99 432 aa16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 SEC62Q99442 399 aaKnown RBP16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 AMOTL2Q9Y2J4 779 aa16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 TTC21AQ8NDW8 1320 aa16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 GPATCH3Q96I76 525 aa16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 HTATSF1O43719 755 aaKnown RBP16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 RPS6KB1P23443 525 aa16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 TEFQ10587 303 aa16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 BICC1Q9H694 974 aaKnown RBP16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 CTNNA3Q9UI47 895 aa16.2■□□□□ 0.18
SEMA4D-217ENST00000475255 H3BQV1 296 aa16.19■□□□□ 0.18
SEMA4D-217ENST00000475255 IFFO2Q5TF58 517 aa16.19■□□□□ 0.18
SEMA4D-217ENST00000475255 SCAND2PQ9GZW5 306 aaPredicted RBP16.19■□□□□ 0.18
SEMA4D-217ENST00000475255 NPHP3Q7Z494 1330 aa16.19■□□□□ 0.18
SEMA4D-217ENST00000475255 BTBD11A6QL63 1104 aa16.19■□□□□ 0.18
SEMA4D-217ENST00000475255 SMTNL1A8MU46 457 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms