RNA–Protein interactions for RNA: ENST00000474916.1

CDK11A-214, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 752 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-214ENST00000474916 ZNF853P0CG23 659 aa21.46■■□□□ 1.03
CDK11A-214ENST00000474916 CFAP44Q96MT7 982 aa21.46■■□□□ 1.03
CDK11A-214ENST00000474916 RIC1Q4ADV7 1423 aa21.46■■□□□ 1.03
CDK11A-214ENST00000474916 CCDC93Q567U6 631 aa21.45■■□□□ 1.02
CDK11A-214ENST00000474916 COL13A1Q5TAT6 717 aaPredicted RBP21.45■■□□□ 1.02
CDK11A-214ENST00000474916 SYNE4Q8N205 404 aa21.45■■□□□ 1.02
CDK11A-214ENST00000474916 RBM46Q8TBY0 533 aaKnown RBP21.45■■□□□ 1.02
CDK11A-214ENST00000474916 DDX21Q9NR30 783 aaKnown RBP eCLIP21.45■■□□□ 1.02
CDK11A-214ENST00000474916 TAF1P21675 1872 aa21.45■■□□□ 1.02
CDK11A-214ENST00000474916 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
CDK11A-214ENST00000474916 HDGFL1Q5TGJ6 251 aa21.44■■□□□ 1.02
CDK11A-214ENST00000474916 C16orf71Q8IYS4 520 aaPredicted RBP21.44■■□□□ 1.02
CDK11A-214ENST00000474916 DUSP27Q5VZP5 1158 aa21.43■■□□□ 1.02
CDK11A-214ENST00000474916 ZNF277Q9NRM2 450 aaPredicted RBP21.43■■□□□ 1.02
CDK11A-214ENST00000474916 COL4A5P29400 1685 aa21.42■■□□□ 1.02
CDK11A-214ENST00000474916 SOGA3Q5TF21 947 aa21.42■■□□□ 1.02
CDK11A-214ENST00000474916 DDX60Q8IY21 1712 aaKnown RBP21.42■■□□□ 1.02
CDK11A-214ENST00000474916 DDNO94850 711 aaPredicted RBP21.41■■□□□ 1.02
CDK11A-214ENST00000474916 FKBP4Q02790 459 aaKnown RBP eCLIP21.41■■□□□ 1.02
CDK11A-214ENST00000474916 PARP10Q53GL7 1025 aa21.41■■□□□ 1.02
CDK11A-214ENST00000474916 PPP1R42Q7Z4L9 355 aa21.41■■□□□ 1.02
CDK11A-214ENST00000474916 NLRP10Q86W26 655 aa21.41■■□□□ 1.02
CDK11A-214ENST00000474916 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
CDK11A-214ENST00000474916 ALDH1B1P30837 517 aa21.4■■□□□ 1.02
CDK11A-214ENST00000474916 HOXA10P31260 410 aaPredicted RBP21.4■■□□□ 1.02
CDK11A-214ENST00000474916 RPGRQ92834 1020 aaKnown RBP21.4■■□□□ 1.02
CDK11A-214ENST00000474916 UTP14AQ9BVJ6 771 aaKnown RBP21.4■■□□□ 1.02
CDK11A-214ENST00000474916 ELL2O00472 640 aaPredicted RBP21.39■■□□□ 1.01
CDK11A-214ENST00000474916 TCERG1O14776 1098 aaKnown RBP21.39■■□□□ 1.01
CDK11A-214ENST00000474916 HOXB7P09629 217 aa21.39■■□□□ 1.01
CDK11A-214ENST00000474916 VEGFAP15692 232 aaPredicted RBP21.39■■□□□ 1.01
CDK11A-214ENST00000474916 TCIRG1Q13488 830 aa21.39■■□□□ 1.01
CDK11A-214ENST00000474916 IFT57Q9NWB7 429 aa21.39■■□□□ 1.01
CDK11A-214ENST00000474916 ZNF541Q9H0D2 1346 aa21.38■■□□□ 1.01
CDK11A-214ENST00000474916 HCLS1P14317 486 aaPredicted RBP21.38■■□□□ 1.01
CDK11A-214ENST00000474916 C8orf58Q8NAV2 365 aa21.38■■□□□ 1.01
CDK11A-214ENST00000474916 COL4A1P02462 1669 aa21.37■■□□□ 1.01
CDK11A-214ENST00000474916 SLC10A5Q5PT55 438 aa21.37■■□□□ 1.01
CDK11A-214ENST00000474916 DPY19L2Q6NUT2 758 aa21.37■■□□□ 1.01
CDK11A-214ENST00000474916 KLRG1Q96E93 195 aa21.37■■□□□ 1.01
CDK11A-214ENST00000474916 DBF4Q9UBU7 674 aaPredicted RBP21.37■■□□□ 1.01
CDK11A-214ENST00000474916 POTEIP0CG38 1075 aa21.36■■□□□ 1.01
CDK11A-214ENST00000474916 POTEJP0CG39 1038 aa21.36■■□□□ 1.01
CDK11A-214ENST00000474916 FSTL1Q12841 308 aa21.36■■□□□ 1.01
CDK11A-214ENST00000474916 HSP90AB3PQ58FF7 597 aa21.36■■□□□ 1.01
CDK11A-214ENST00000474916 RTKN2Q8IZC4 609 aa21.36■■□□□ 1.01
CDK11A-214ENST00000474916 PLBD2Q8NHP8 589 aa21.36■■□□□ 1.01
CDK11A-214ENST00000474916 CRAMP1Q96RY5 1269 aa21.36■■□□□ 1.01
CDK11A-214ENST00000474916 PHAXQ9H814 394 aaKnown RBP21.36■■□□□ 1.01
CDK11A-214ENST00000474916 ABCC4O15439 1325 aa21.35■■□□□ 1.01
CDK11A-214ENST00000474916 ATP5J2-PTCD1G3V325 749 aa21.35■■□□□ 1.01
CDK11A-214ENST00000474916 PPEF1O14829 653 aaPredicted RBP21.35■■□□□ 1.01
CDK11A-214ENST00000474916 IARSP41252 1262 aaKnown RBP21.35■■□□□ 1.01
CDK11A-214ENST00000474916 GNAI1P63096 354 aa21.35■■□□□ 1.01
CDK11A-214ENST00000474916 ANKRD13DQ6ZTN6 518 aa21.35■■□□□ 1.01
CDK11A-214ENST00000474916 TSPYL6Q8N831 410 aa21.35■■□□□ 1.01
CDK11A-214ENST00000474916 RBM17Q96I25 401 aaKnown RBP21.35■■□□□ 1.01
CDK11A-214ENST00000474916 NLRP3Q96P20 1036 aa21.35■■□□□ 1.01
CDK11A-214ENST00000474916 SMC1BQ8NDV3 1235 aa21.34■■□□□ 1.01
CDK11A-214ENST00000474916 TSR2Q969E8 191 aaKnown RBP21.34■■□□□ 1.01
CDK11A-214ENST00000474916 ISCA1Q9BUE6 129 aa21.34■■□□□ 1.01
CDK11A-214ENST00000474916 TRMT112Q9UI30 125 aaKnown RBP21.34■■□□□ 1.01
CDK11A-214ENST00000474916 SCN4AP35499 1836 aa21.34■■□□□ 1.01
CDK11A-214ENST00000474916 JMYQ8N9B5 988 aa21.33■■□□□ 1.01
CDK11A-214ENST00000474916 PSMD1Q99460 953 aa21.33■■□□□ 1.01
CDK11A-214ENST00000474916 MRS2Q9HD23 443 aa21.33■■□□□ 1.01
CDK11A-214ENST00000474916 HYPKQ9NX55 129 aa21.32■■□□□ 1
CDK11A-214ENST00000474916 SH3TC1Q8TE82 1336 aa21.31■■□□□ 1
CDK11A-214ENST00000474916 LTBP1Q14766 1721 aa21.31■■□□□ 1
CDK11A-214ENST00000474916 RNF123Q5XPI4 1314 aa21.3■■□□□ 1
CDK11A-214ENST00000474916 FZD9O00144 591 aa21.3■■□□□ 1
CDK11A-214ENST00000474916 CALD1Q05682 793 aaKnown RBP21.3■■□□□ 1
CDK11A-214ENST00000474916 RTL5Q5HYW3 569 aaPredicted RBP21.3■■□□□ 1
CDK11A-214ENST00000474916 WWC1Q8IX03 1113 aa21.3■■□□□ 1
CDK11A-214ENST00000474916 TNS4Q8IZW8 715 aa21.3■■□□□ 1
CDK11A-214ENST00000474916 FAM89AQ96GI7 184 aa21.3■■□□□ 1
CDK11A-214ENST00000474916 ANP32CO43423 234 aa21.29■■□□□ 1
CDK11A-214ENST00000474916 CC2D2BQ6DHV5 1058 aa21.29■■□□□ 1
CDK11A-214ENST00000474916 L3MBTL3Q96JM7 780 aaPredicted RBP21.29■■□□□ 1
CDK11A-214ENST00000474916 ATP6V0A2Q9Y487 856 aa21.29■■□□□ 1
CDK11A-214ENST00000474916 LRRC37AA6NMS7 1700 aa21.29■■□□□ 1
CDK11A-214ENST00000474916 ADAMTSL1Q8N6G6 1762 aa21.28■■□□□ 1
CDK11A-214ENST00000474916 DUOX1Q9NRD9 1551 aa21.27■■□□□ 1
CDK11A-214ENST00000474916 CCDC27Q2M243 656 aa21.27■■□□□ 1
CDK11A-214ENST00000474916 TAF1DQ9H5J8 278 aaPredicted RBP21.27■■□□□ 1
CDK11A-214ENST00000474916 SALL2Q9Y467 1007 aaPredicted RBP21.27■■□□□ 1
CDK11A-214ENST00000474916 RIC3Q7Z5B4 369 aa21.26■□□□□ 0.99
CDK11A-214ENST00000474916 JARID2Q92833 1246 aaPredicted RBP21.26■□□□□ 0.99
CDK11A-214ENST00000474916 GRAPQ13588 217 aa21.25■□□□□ 0.99
CDK11A-214ENST00000474916 AOC3Q16853 763 aa21.25■□□□□ 0.99
CDK11A-214ENST00000474916 LARGE2Q8N3Y3 721 aa21.25■□□□□ 0.99
CDK11A-214ENST00000474916 GRAPLQ8TC17 118 aaPredicted RBP21.25■□□□□ 0.99
CDK11A-214ENST00000474916 MYD88Q99836 296 aa21.25■□□□□ 0.99
CDK11A-214ENST00000474916 GOLGA2Q08379 1002 aa21.24■□□□□ 0.99
CDK11A-214ENST00000474916 DDX46Q7L014 1031 aaKnown RBP21.24■□□□□ 0.99
CDK11A-214ENST00000474916 CELF1Q92879 486 aaKnown RBP21.24■□□□□ 0.99
CDK11A-214ENST00000474916 PPIP5K2O43314 1243 aa21.23■□□□□ 0.99
CDK11A-214ENST00000474916 TRIM28Q13263 835 aaKnown RBP21.23■□□□□ 0.99
CDK11A-214ENST00000474916 CHADLQ6NUI6 762 aa21.23■□□□□ 0.99
CDK11A-214ENST00000474916 SP8Q8IXZ3 490 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms