RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 NTSR2O95665 410 aa18.24■□□□□ 0.51
DNMT3A-211ENST00000474887 ZNF853P0CG23 659 aa18.24■□□□□ 0.51
DNMT3A-211ENST00000474887 TCIRG1Q13488 830 aa18.24■□□□□ 0.51
DNMT3A-211ENST00000474887 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
DNMT3A-211ENST00000474887 NUTM1Q86Y26 1132 aa18.24■□□□□ 0.51
DNMT3A-211ENST00000474887 PSMD1Q99460 953 aa18.24■□□□□ 0.51
DNMT3A-211ENST00000474887 TMX4Q9H1E5 349 aaPredicted RBP18.24■□□□□ 0.51
DNMT3A-211ENST00000474887 IFT57Q9NWB7 429 aa18.24■□□□□ 0.51
DNMT3A-211ENST00000474887 HYPKQ9NX55 129 aa18.24■□□□□ 0.51
DNMT3A-211ENST00000474887 NUP98P52948 1817 aa18.23■□□□□ 0.51
DNMT3A-211ENST00000474887 ARFGEF2Q9Y6D5 1785 aa18.23■□□□□ 0.51
DNMT3A-211ENST00000474887 APAF1O14727 1248 aa18.23■□□□□ 0.51
DNMT3A-211ENST00000474887 HDGFL1Q5TGJ6 251 aa18.23■□□□□ 0.51
DNMT3A-211ENST00000474887 XAGE3Q8WTP9 111 aa18.23■□□□□ 0.51
DNMT3A-211ENST00000474887 IQCA1LA6NCM1 817 aa18.22■□□□□ 0.51
DNMT3A-211ENST00000474887 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
DNMT3A-211ENST00000474887 PLBD2Q8NHP8 589 aa18.22■□□□□ 0.51
DNMT3A-211ENST00000474887 VPS33BQ9H267 617 aa18.22■□□□□ 0.51
DNMT3A-211ENST00000474887 ABCC12Q96J65 1359 aa18.21■□□□□ 0.51
DNMT3A-211ENST00000474887 DUSP27Q5VZP5 1158 aa18.21■□□□□ 0.51
DNMT3A-211ENST00000474887 ANKRD13DQ6ZTN6 518 aa18.21■□□□□ 0.51
DNMT3A-211ENST00000474887 BBOX1O75936 387 aa18.2■□□□□ 0.5
DNMT3A-211ENST00000474887 AIMP1Q12904 312 aaKnown RBP18.2■□□□□ 0.5
DNMT3A-211ENST00000474887 NLRP10Q86W26 655 aa18.2■□□□□ 0.5
DNMT3A-211ENST00000474887 SYNE4Q8N205 404 aa18.2■□□□□ 0.5
DNMT3A-211ENST00000474887 L3MBTL3Q96JM7 780 aaPredicted RBP18.2■□□□□ 0.5
DNMT3A-211ENST00000474887 MBIPQ9NS73 344 aa18.2■□□□□ 0.5
DNMT3A-211ENST00000474887 CHPF2Q9P2E5 772 aa18.2■□□□□ 0.5
DNMT3A-211ENST00000474887 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-211ENST00000474887 POTECB2RU33 542 aa18.19■□□□□ 0.5
DNMT3A-211ENST00000474887 ANXA1P04083 346 aa18.19■□□□□ 0.5
DNMT3A-211ENST00000474887 IARSP41252 1262 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-211ENST00000474887 TRIM28Q13263 835 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-211ENST00000474887 CCDC27Q2M243 656 aa18.19■□□□□ 0.5
DNMT3A-211ENST00000474887 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
DNMT3A-211ENST00000474887 JDP2Q8WYK2 163 aa18.19■□□□□ 0.5
DNMT3A-211ENST00000474887 SH3TC1Q8TE82 1336 aa18.19■□□□□ 0.5
DNMT3A-211ENST00000474887 HSP90B1P14625 803 aaKnown RBP18.18■□□□□ 0.5
DNMT3A-211ENST00000474887 TMC4Q7Z404 712 aa18.18■□□□□ 0.5
DNMT3A-211ENST00000474887 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
DNMT3A-211ENST00000474887 TRMT112Q9UI30 125 aaKnown RBP18.18■□□□□ 0.5
DNMT3A-211ENST00000474887 CCDC88AQ3V6T2 1871 aa18.18■□□□□ 0.5
DNMT3A-211ENST00000474887 WDR90Q96KV7 1748 aa18.18■□□□□ 0.5
DNMT3A-211ENST00000474887 FZD9O00144 591 aa18.17■□□□□ 0.5
DNMT3A-211ENST00000474887 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
DNMT3A-211ENST00000474887 SUPT20HQ8NEM7 779 aa18.17■□□□□ 0.5
DNMT3A-211ENST00000474887 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
DNMT3A-211ENST00000474887 ATP6V0A2Q9Y487 856 aa18.17■□□□□ 0.5
DNMT3A-211ENST00000474887 ZNF316A6NFI3 1004 aaPredicted RBP18.16■□□□□ 0.5
DNMT3A-211ENST00000474887 PPEF1O14829 653 aaPredicted RBP18.16■□□□□ 0.5
DNMT3A-211ENST00000474887 DDNO94850 711 aaPredicted RBP18.16■□□□□ 0.5
DNMT3A-211ENST00000474887 TIAM2Q8IVF5 1701 aa18.15■□□□□ 0.5
DNMT3A-211ENST00000474887 ANP32CO43423 234 aa18.15■□□□□ 0.5
DNMT3A-211ENST00000474887 CHADLQ6NUI6 762 aa18.15■□□□□ 0.5
DNMT3A-211ENST00000474887 GPC2Q8N158 579 aa18.15■□□□□ 0.5
DNMT3A-211ENST00000474887 ISCA1Q9BUE6 129 aa18.15■□□□□ 0.5
DNMT3A-211ENST00000474887 SNED1Q8TER0 1413 aa18.15■□□□□ 0.5
DNMT3A-211ENST00000474887 GOLGA2Q08379 1002 aa18.14■□□□□ 0.49
DNMT3A-211ENST00000474887 CCDC30Q5VVM6 783 aa18.14■□□□□ 0.49
DNMT3A-211ENST00000474887 DDX46Q7L014 1031 aaKnown RBP18.14■□□□□ 0.49
DNMT3A-211ENST00000474887 PNMA8AQ86V59 439 aaPredicted RBP18.14■□□□□ 0.49
DNMT3A-211ENST00000474887 SP8Q8IXZ3 490 aa18.14■□□□□ 0.49
DNMT3A-211ENST00000474887 EIF6P56537 245 aaKnown RBP18.13■□□□□ 0.49
DNMT3A-211ENST00000474887 OLFM4Q6UX06 510 aa18.13■□□□□ 0.49
DNMT3A-211ENST00000474887 LDHDQ86WU2 507 aa18.13■□□□□ 0.49
DNMT3A-211ENST00000474887 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
DNMT3A-211ENST00000474887 SF3B3Q15393 1217 aaKnown RBP18.12■□□□□ 0.49
DNMT3A-211ENST00000474887 C3orf67Q6ZVT6 689 aa18.12■□□□□ 0.49
DNMT3A-211ENST00000474887 RIC3Q7Z5B4 369 aa18.12■□□□□ 0.49
DNMT3A-211ENST00000474887 KLRG1Q96E93 195 aa18.12■□□□□ 0.49
DNMT3A-211ENST00000474887 RTFDC1Q9BY42 306 aaPredicted RBP18.12■□□□□ 0.49
DNMT3A-211ENST00000474887 TAF1DQ9H5J8 278 aaPredicted RBP18.12■□□□□ 0.49
DNMT3A-211ENST00000474887 HACL1Q9UJ83 578 aa18.12■□□□□ 0.49
DNMT3A-211ENST00000474887 IL16Q14005 1332 aa18.12■□□□□ 0.49
DNMT3A-211ENST00000474887 HCLS1P14317 486 aaPredicted RBP18.11■□□□□ 0.49
DNMT3A-211ENST00000474887 GRAPQ13588 217 aa18.11■□□□□ 0.49
DNMT3A-211ENST00000474887 LARGE2Q8N3Y3 721 aa18.11■□□□□ 0.49
DNMT3A-211ENST00000474887 GRAPLQ8TC17 118 aaPredicted RBP18.11■□□□□ 0.49
DNMT3A-211ENST00000474887 ABCC4O15439 1325 aa18.11■□□□□ 0.49
DNMT3A-211ENST00000474887 JMYQ8N9B5 988 aa18.1■□□□□ 0.49
DNMT3A-211ENST00000474887 CACNA1SQ13698 1873 aa18.09■□□□□ 0.49
DNMT3A-211ENST00000474887 DPP8Q6V1X1 898 aaPredicted RBP18.09■□□□□ 0.49
DNMT3A-211ENST00000474887 WWC1Q8IX03 1113 aa18.09■□□□□ 0.49
DNMT3A-211ENST00000474887 NIM1KQ8IY84 436 aa18.09■□□□□ 0.49
DNMT3A-211ENST00000474887 MPNDQ8N594 471 aa18.09■□□□□ 0.49
DNMT3A-211ENST00000474887 C8orf58Q8NAV2 365 aa18.09■□□□□ 0.49
DNMT3A-211ENST00000474887 CCDC191Q8NCU4 936 aa18.09■□□□□ 0.49
DNMT3A-211ENST00000474887 MRS2Q9HD23 443 aa18.09■□□□□ 0.49
DNMT3A-211ENST00000474887 SCN4AP35499 1836 aa18.09■□□□□ 0.49
DNMT3A-211ENST00000474887 ZNF541Q9H0D2 1346 aa18.08■□□□□ 0.49
DNMT3A-211ENST00000474887 ZBTB38Q8NAP3 1195 aaPredicted RBP18.08■□□□□ 0.48
DNMT3A-211ENST00000474887 ATP5J2-PTCD1G3V325 749 aa18.07■□□□□ 0.48
DNMT3A-211ENST00000474887 ELL2O00472 640 aaPredicted RBP18.07■□□□□ 0.48
DNMT3A-211ENST00000474887 LMOD1P29536 600 aaPredicted RBP18.07■□□□□ 0.48
DNMT3A-211ENST00000474887 EPHX2P34913 555 aa18.07■□□□□ 0.48
DNMT3A-211ENST00000474887 WDR63Q8IWG1 891 aa18.07■□□□□ 0.48
DNMT3A-211ENST00000474887 FAM89AQ96GI7 184 aa18.07■□□□□ 0.48
DNMT3A-211ENST00000474887 STK31Q9BXU1 1019 aa18.07■□□□□ 0.48
DNMT3A-211ENST00000474887 ZNRF3Q9ULT6 936 aa18.07■□□□□ 0.48
DNMT3A-211ENST00000474887 ANKRD36CQ5JPF3 1778 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms