RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 UTP14AQ9BVJ6 771 aaKnown RBP21.64■■□□□ 1.05
SCAF11-206ENST00000474828 ABCC12Q96J65 1359 aa21.63■■□□□ 1.05
SCAF11-206ENST00000474828 DPEP1P16444 411 aa21.63■■□□□ 1.05
SCAF11-206ENST00000474828 FKBP5Q13451 457 aaPredicted RBP21.63■■□□□ 1.05
SCAF11-206ENST00000474828 CRY2Q49AN0 593 aa21.63■■□□□ 1.05
SCAF11-206ENST00000474828 A0A0G2JLW4 131 aa21.62■■□□□ 1.05
SCAF11-206ENST00000474828 ERFEQ4G0M1 354 aa21.62■■□□□ 1.05
SCAF11-206ENST00000474828 DNAAF4Q8WXU2 420 aa21.62■■□□□ 1.05
SCAF11-206ENST00000474828 N4BP2Q86UW6 1770 aaPredicted RBP21.61■■□□□ 1.05
SCAF11-206ENST00000474828 ATP5J2-PTCD1G3V325 749 aa21.61■■□□□ 1.05
SCAF11-206ENST00000474828 SRGNP10124 158 aa21.61■■□□□ 1.05
SCAF11-206ENST00000474828 KLHL34Q8N239 644 aa21.61■■□□□ 1.05
SCAF11-206ENST00000474828 LINS1Q8NG48 757 aa21.61■■□□□ 1.05
SCAF11-206ENST00000474828 MYD88Q99836 296 aa21.61■■□□□ 1.05
SCAF11-206ENST00000474828 COL11A2P13942 1736 aaPredicted RBP21.6■■□□□ 1.05
SCAF11-206ENST00000474828 TNRC6CQ9HCJ0 1690 aaKnown RBP21.6■■□□□ 1.05
SCAF11-206ENST00000474828 NUTM1Q86Y26 1132 aa21.6■■□□□ 1.05
SCAF11-206ENST00000474828 UTRNP46939 3433 aa21.6■■□□□ 1.05
SCAF11-206ENST00000474828 SH3TC1Q8TE82 1336 aa21.59■■□□□ 1.05
SCAF11-206ENST00000474828 NEURL1BA8MQ27 555 aa21.59■■□□□ 1.05
SCAF11-206ENST00000474828 H0YIN7 160 aa21.59■■□□□ 1.05
SCAF11-206ENST00000474828 CHRNA5P30532 468 aa21.59■■□□□ 1.05
SCAF11-206ENST00000474828 BEND3Q5T5X7 828 aa21.59■■□□□ 1.05
SCAF11-206ENST00000474828 CCDC24Q8N4L8 307 aa21.59■■□□□ 1.05
SCAF11-206ENST00000474828 ZBTB38Q8NAP3 1195 aaPredicted RBP21.59■■□□□ 1.05
SCAF11-206ENST00000474828 SMC4Q9NTJ3 1288 aa21.59■■□□□ 1.05
SCAF11-206ENST00000474828 CWC25Q9NXE8 425 aaPredicted RBP21.59■■□□□ 1.05
SCAF11-206ENST00000474828 TRMT112Q9UI30 125 aaKnown RBP21.59■■□□□ 1.05
SCAF11-206ENST00000474828 PCCAP05165 728 aaPredicted RBP21.58■■□□□ 1.05
SCAF11-206ENST00000474828 HOXA10P31260 410 aaPredicted RBP21.58■■□□□ 1.05
SCAF11-206ENST00000474828 NEXNQ0ZGT2 675 aa21.58■■□□□ 1.05
SCAF11-206ENST00000474828 STYK1Q6J9G0 422 aa21.58■■□□□ 1.05
SCAF11-206ENST00000474828 C2CD5Q86YS7 1000 aa21.58■■□□□ 1.05
SCAF11-206ENST00000474828 ARHGAP45Q92619 1136 aa21.58■■□□□ 1.05
SCAF11-206ENST00000474828 PIM2Q9P1W9 311 aa21.58■■□□□ 1.05
SCAF11-206ENST00000474828 FAM177BA6PVY3 158 aa21.57■■□□□ 1.04
SCAF11-206ENST00000474828 SYNE4Q8N205 404 aa21.57■■□□□ 1.04
SCAF11-206ENST00000474828 CDHR2Q9BYE9 1310 aa21.56■■□□□ 1.04
SCAF11-206ENST00000474828 DDX60Q8IY21 1712 aaKnown RBP21.56■■□□□ 1.04
SCAF11-206ENST00000474828 F6X3S4 739 aa21.56■■□□□ 1.04
SCAF11-206ENST00000474828 H7C1W4 665 aa21.56■■□□□ 1.04
SCAF11-206ENST00000474828 YBX3P16989 372 aaKnown RBP eCLIP21.56■■□□□ 1.04
SCAF11-206ENST00000474828 GTF2E1P29083 439 aaPredicted RBP21.56■■□□□ 1.04
SCAF11-206ENST00000474828 GCKRQ14397 625 aa21.56■■□□□ 1.04
SCAF11-206ENST00000474828 MASTLQ96GX5 879 aa21.56■■□□□ 1.04
SCAF11-206ENST00000474828 BCL2L13Q9BXK5 485 aa21.56■■□□□ 1.04
SCAF11-206ENST00000474828 LAMB2P55268 1798 aa21.56■■□□□ 1.04
SCAF11-206ENST00000474828 NPR1P16066 1061 aa21.55■■□□□ 1.04
SCAF11-206ENST00000474828 CASP7P55210 303 aa21.55■■□□□ 1.04
SCAF11-206ENST00000474828 CWF19L2Q2TBE0 894 aaKnown RBP21.55■■□□□ 1.04
SCAF11-206ENST00000474828 FAM89AQ96GI7 184 aa21.55■■□□□ 1.04
SCAF11-206ENST00000474828 KIF16BQ96L93 1317 aa21.55■■□□□ 1.04
SCAF11-206ENST00000474828 NPHP1O15259 732 aa21.54■■□□□ 1.04
SCAF11-206ENST00000474828 ALDH1L1O75891 902 aa21.54■■□□□ 1.04
SCAF11-206ENST00000474828 SF3B3Q15393 1217 aaKnown RBP21.54■■□□□ 1.04
SCAF11-206ENST00000474828 C3orf67Q6ZVT6 689 aa21.54■■□□□ 1.04
SCAF11-206ENST00000474828 ARFGEF1Q9Y6D6 1849 aa21.54■■□□□ 1.04
SCAF11-206ENST00000474828 DALRD3Q5D0E6 543 aaKnown RBP21.53■■□□□ 1.04
SCAF11-206ENST00000474828 TTLL6Q8N841 843 aa21.53■■□□□ 1.04
SCAF11-206ENST00000474828 NLRP3Q96P20 1036 aa21.53■■□□□ 1.04
SCAF11-206ENST00000474828 HSP90B1P14625 803 aaKnown RBP21.52■■□□□ 1.04
SCAF11-206ENST00000474828 CNKSR1Q969H4 720 aa21.52■■□□□ 1.04
SCAF11-206ENST00000474828 CRAMP1Q96RY5 1269 aa21.52■■□□□ 1.04
SCAF11-206ENST00000474828 PLA2G12BQ9BX93 195 aa21.52■■□□□ 1.04
SCAF11-206ENST00000474828 NOB1Q9ULX3 412 aaKnown RBP21.52■■□□□ 1.04
SCAF11-206ENST00000474828 UTYO14607 1347 aa21.52■■□□□ 1.03
SCAF11-206ENST00000474828 IRS4O14654 1257 aaPredicted RBP21.51■■□□□ 1.03
SCAF11-206ENST00000474828 GRIN3BO60391 1043 aa21.51■■□□□ 1.03
SCAF11-206ENST00000474828 BCAR3O75815 825 aa21.51■■□□□ 1.03
SCAF11-206ENST00000474828 HCLS1P14317 486 aaPredicted RBP21.51■■□□□ 1.03
SCAF11-206ENST00000474828 C7orf43Q8WVR3 580 aa21.51■■□□□ 1.03
SCAF11-206ENST00000474828 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
SCAF11-206ENST00000474828 GPR162Q16538 588 aa21.5■■□□□ 1.03
SCAF11-206ENST00000474828 ALDH1B1P30837 517 aa21.49■■□□□ 1.03
SCAF11-206ENST00000474828 ZNF784Q8NCA9 323 aaPredicted RBP21.49■■□□□ 1.03
SCAF11-206ENST00000474828 SRCIN1Q9C0H9 1055 aa21.49■■□□□ 1.03
SCAF11-206ENST00000474828 ABCC4O15439 1325 aa21.49■■□□□ 1.03
SCAF11-206ENST00000474828 SNED1Q8TER0 1413 aa21.48■■□□□ 1.03
SCAF11-206ENST00000474828 PDE8AO60658 829 aa21.48■■□□□ 1.03
SCAF11-206ENST00000474828 RTL9Q8NET4 1388 aa21.48■■□□□ 1.03
SCAF11-206ENST00000474828 IPO8O15397 1037 aaKnown RBP21.47■■□□□ 1.03
SCAF11-206ENST00000474828 PRPF40BQ6NWY9 871 aaKnown RBP21.47■■□□□ 1.03
SCAF11-206ENST00000474828 BCS1LQ9Y276 419 aa21.47■■□□□ 1.03
SCAF11-206ENST00000474828 SLX4Q8IY92 1834 aa21.46■■□□□ 1.03
SCAF11-206ENST00000474828 GRM8O00222 908 aa21.46■■□□□ 1.03
SCAF11-206ENST00000474828 TRIM27P14373 513 aa21.46■■□□□ 1.03
SCAF11-206ENST00000474828 INTS3Q68E01 1043 aaKnown RBP21.46■■□□□ 1.03
SCAF11-206ENST00000474828 ATF7IPQ6VMQ6 1270 aa21.46■■□□□ 1.03
SCAF11-206ENST00000474828 PELP1Q8IZL8 1130 aaKnown RBP21.46■■□□□ 1.03
SCAF11-206ENST00000474828 ZNF622Q969S3 477 aaKnown RBP eCLIP21.46■■□□□ 1.032e-9■□□□□ 9
SCAF11-206ENST00000474828 CSF1RP07333 972 aa21.45■■□□□ 1.02
SCAF11-206ENST00000474828 CCT4P50991 539 aaKnown RBP21.45■■□□□ 1.02
SCAF11-206ENST00000474828 SLC4A10Q6U841 1118 aa21.45■■□□□ 1.02
SCAF11-206ENST00000474828 UBE3BQ7Z3V4 1068 aa21.45■■□□□ 1.02
SCAF11-206ENST00000474828 RPGRQ92834 1020 aaKnown RBP21.45■■□□□ 1.02
SCAF11-206ENST00000474828 RBM17Q96I25 401 aaKnown RBP21.45■■□□□ 1.02
SCAF11-206ENST00000474828 RTL5Q5HYW3 569 aaPredicted RBP21.44■■□□□ 1.02
SCAF11-206ENST00000474828 TTLL11Q8NHH1 800 aa21.44■■□□□ 1.02
SCAF11-206ENST00000474828 USP44Q9H0E7 712 aa21.44■■□□□ 1.02
SCAF11-206ENST00000474828 BBOX1O75936 387 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms