RNA–Protein interactions for RNA: ENST00000474562.1

SIKE1-207, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-207ENST00000474562 C16orf71Q8IYS4 520 aaPredicted RBP24.34■■□□□ 1.49
SIKE1-207ENST00000474562 HYPKQ9NX55 129 aa24.34■■□□□ 1.49
SIKE1-207ENST00000474562 RIC1Q4ADV7 1423 aa24.33■■□□□ 1.49
SIKE1-207ENST00000474562 LTBP3Q9NS15 1303 aa24.33■■□□□ 1.48
SIKE1-207ENST00000474562 DICER1Q9UPY3 1922 aaKnown RBP24.32■■□□□ 1.48
SIKE1-207ENST00000474562 TCIRG1Q13488 830 aa24.32■■□□□ 1.48
SIKE1-207ENST00000474562 CRY2Q49AN0 593 aa24.32■■□□□ 1.48
SIKE1-207ENST00000474562 CCDC27Q2M243 656 aa24.31■■□□□ 1.48
SIKE1-207ENST00000474562 ANKRD13DQ6ZTN6 518 aa24.31■■□□□ 1.48
SIKE1-207ENST00000474562 PLBD2Q8NHP8 589 aa24.31■■□□□ 1.48
SIKE1-207ENST00000474562 C7orf43Q8WVR3 580 aa24.31■■□□□ 1.48
SIKE1-207ENST00000474562 NLRP3Q96P20 1036 aa24.31■■□□□ 1.48
SIKE1-207ENST00000474562 CHMP4AQ9BY43 222 aa24.31■■□□□ 1.48
SIKE1-207ENST00000474562 RNF123Q5XPI4 1314 aa24.31■■□□□ 1.48
SIKE1-207ENST00000474562 TOMM70O94826 608 aa24.3■■□□□ 1.48
SIKE1-207ENST00000474562 NLRP10Q86W26 655 aa24.3■■□□□ 1.48
SIKE1-207ENST00000474562 WWC1Q8IX03 1113 aa24.3■■□□□ 1.48
SIKE1-207ENST00000474562 RBM17Q96I25 401 aaKnown RBP24.3■■□□□ 1.48
SIKE1-207ENST00000474562 RRAGCQ9HB90 399 aa24.3■■□□□ 1.48
SIKE1-207ENST00000474562 DPY19L2Q6NUT2 758 aa24.29■■□□□ 1.48
SIKE1-207ENST00000474562 RTKN2Q8IZC4 609 aa24.29■■□□□ 1.48
SIKE1-207ENST00000474562 TRMT112Q9UI30 125 aaKnown RBP24.29■■□□□ 1.48
SIKE1-207ENST00000474562 GLTPD2A6NH11 291 aa24.28■■□□□ 1.48
SIKE1-207ENST00000474562 C8orf58Q8NAV2 365 aa24.28■■□□□ 1.48
SIKE1-207ENST00000474562 FKBP4Q02790 459 aaKnown RBP eCLIP24.27■■□□□ 1.48
SIKE1-207ENST00000474562 GOLGA2Q08379 1002 aa24.27■■□□□ 1.48
SIKE1-207ENST00000474562 TSR2Q969E8 191 aaKnown RBP24.27■■□□□ 1.48
SIKE1-207ENST00000474562 SALL2Q9Y467 1007 aaPredicted RBP24.27■■□□□ 1.48
SIKE1-207ENST00000474562 HOXA10P31260 410 aaPredicted RBP24.26■■□□□ 1.47
SIKE1-207ENST00000474562 SLC10A5Q5PT55 438 aa24.26■■□□□ 1.47
SIKE1-207ENST00000474562 CCDC30Q5VVM6 783 aa24.26■■□□□ 1.47
SIKE1-207ENST00000474562 OLFM4Q6UX06 510 aa24.26■■□□□ 1.47
SIKE1-207ENST00000474562 RIC3Q7Z5B4 369 aa24.26■■□□□ 1.47
SIKE1-207ENST00000474562 FAM9BQ8IZU0 186 aa24.26■■□□□ 1.47
SIKE1-207ENST00000474562 CRAMP1Q96RY5 1269 aa24.26■■□□□ 1.47
SIKE1-207ENST00000474562 SH3TC1Q8TE82 1336 aa24.26■■□□□ 1.47
SIKE1-207ENST00000474562 NCBP3Q53F19 620 aaKnown RBP24.25■■□□□ 1.47
SIKE1-207ENST00000474562 HCLS1P14317 486 aaPredicted RBP24.24■■□□□ 1.47
SIKE1-207ENST00000474562 HSPA6P17066 643 aa24.24■■□□□ 1.47
SIKE1-207ENST00000474562 CC2D2BQ6DHV5 1058 aa24.24■■□□□ 1.47
SIKE1-207ENST00000474562 C3orf67Q6ZVT6 689 aa24.24■■□□□ 1.47
SIKE1-207ENST00000474562 ZNF428Q96B54 188 aa24.24■■□□□ 1.47
SIKE1-207ENST00000474562 TMX4Q9H1E5 349 aaPredicted RBP24.24■■□□□ 1.47
SIKE1-207ENST00000474562 PHAXQ9H814 394 aaKnown RBP24.24■■□□□ 1.47
SIKE1-207ENST00000474562 ATP5J2-PTCD1G3V325 749 aa24.23■■□□□ 1.47
SIKE1-207ENST00000474562 TCERG1O14776 1098 aaKnown RBP24.23■■□□□ 1.47
SIKE1-207ENST00000474562 PPEF1O14829 653 aaPredicted RBP24.23■■□□□ 1.47
SIKE1-207ENST00000474562 ZNF277Q9NRM2 450 aaPredicted RBP24.23■■□□□ 1.47
SIKE1-207ENST00000474562 IL16Q14005 1332 aa24.23■■□□□ 1.47
SIKE1-207ENST00000474562 VEGFAP15692 232 aaPredicted RBP24.22■■□□□ 1.47
SIKE1-207ENST00000474562 TSPYL6Q8N831 410 aa24.22■■□□□ 1.47
SIKE1-207ENST00000474562 RBM46Q8TBY0 533 aaKnown RBP24.22■■□□□ 1.47
SIKE1-207ENST00000474562 ISCA1Q9BUE6 129 aa24.22■■□□□ 1.47
SIKE1-207ENST00000474562 LAMB2P55268 1798 aa24.21■■□□□ 1.47
SIKE1-207ENST00000474562 DDX58O95786 925 aaKnown RBP24.21■■□□□ 1.47
SIKE1-207ENST00000474562 SYNE4Q8N205 404 aa24.21■■□□□ 1.47
SIKE1-207ENST00000474562 STK31Q9BXU1 1019 aa24.21■■□□□ 1.47
SIKE1-207ENST00000474562 TWISTNBQ3B726 338 aaPredicted RBP24.2■■□□□ 1.46
SIKE1-207ENST00000474562 GRIPAP1Q4V328 841 aa24.2■■□□□ 1.46
SIKE1-207ENST00000474562 IARSP41252 1262 aaKnown RBP24.19■■□□□ 1.46
SIKE1-207ENST00000474562 DDX46Q7L014 1031 aaKnown RBP24.19■■□□□ 1.46
SIKE1-207ENST00000474562 PSMD1Q99460 953 aa24.19■■□□□ 1.46
SIKE1-207ENST00000474562 WDR63Q8IWG1 891 aa24.18■■□□□ 1.46
SIKE1-207ENST00000474562 FAM89AQ96GI7 184 aa24.18■■□□□ 1.46
SIKE1-207ENST00000474562 MYD88Q99836 296 aa24.18■■□□□ 1.46
SIKE1-207ENST00000474562 ABCC4O15439 1325 aa24.17■■□□□ 1.46
SIKE1-207ENST00000474562 FSTL1Q12841 308 aa24.17■■□□□ 1.46
SIKE1-207ENST00000474562 TRIM28Q13263 835 aaKnown RBP24.17■■□□□ 1.46
SIKE1-207ENST00000474562 RTL5Q5HYW3 569 aaPredicted RBP24.17■■□□□ 1.46
SIKE1-207ENST00000474562 WDR90Q96KV7 1748 aa24.17■■□□□ 1.46
SIKE1-207ENST00000474562 DDNO94850 711 aaPredicted RBP24.16■■□□□ 1.46
SIKE1-207ENST00000474562 JDP2Q8WYK2 163 aa24.16■■□□□ 1.46
SIKE1-207ENST00000474562 DDX60Q8IY21 1712 aaKnown RBP24.15■■□□□ 1.46
SIKE1-207ENST00000474562 FANCIQ9NVI1 1328 aa24.15■■□□□ 1.46
SIKE1-207ENST00000474562 BBOX1O75936 387 aa24.15■■□□□ 1.46
SIKE1-207ENST00000474562 SMC1BQ8NDV3 1235 aa24.15■■□□□ 1.46
SIKE1-207ENST00000474562 ATP6V0A2Q9Y487 856 aa24.15■■□□□ 1.46
SIKE1-207ENST00000474562 SNED1Q8TER0 1413 aa24.14■■□□□ 1.45
SIKE1-207ENST00000474562 IRS4O14654 1257 aaPredicted RBP24.13■■□□□ 1.45
SIKE1-207ENST00000474562 HSP90B1P14625 803 aaKnown RBP24.13■■□□□ 1.45
SIKE1-207ENST00000474562 APLP1P51693 650 aa24.13■■□□□ 1.45
SIKE1-207ENST00000474562 GRAPQ13588 217 aa24.13■■□□□ 1.45
SIKE1-207ENST00000474562 GRAPLQ8TC17 118 aaPredicted RBP24.13■■□□□ 1.45
SIKE1-207ENST00000474562 MAP3K2Q9Y2U5 619 aa24.13■■□□□ 1.45
SIKE1-207ENST00000474562 LARGE2Q8N3Y3 721 aa24.12■■□□□ 1.45
SIKE1-207ENST00000474562 ZBTB38Q8NAP3 1195 aaPredicted RBP24.12■■□□□ 1.45
SIKE1-207ENST00000474562 CCDC191Q8NCU4 936 aa24.12■■□□□ 1.45
SIKE1-207ENST00000474562 METTL22Q9BUU2 404 aaPredicted RBP24.12■■□□□ 1.45
SIKE1-207ENST00000474562 CWC25Q9NXE8 425 aaPredicted RBP24.12■■□□□ 1.45
SIKE1-207ENST00000474562 TAF1P21675 1872 aa24.11■■□□□ 1.45
SIKE1-207ENST00000474562 POTECB2RU33 542 aa24.11■■□□□ 1.45
SIKE1-207ENST00000474562 SLC4A2P04920 1241 aa24.11■■□□□ 1.45
SIKE1-207ENST00000474562 KSR2Q6VAB6 950 aa24.11■■□□□ 1.45
SIKE1-207ENST00000474562 SLC51AQ86UW1 340 aa24.11■■□□□ 1.45
SIKE1-207ENST00000474562 SP8Q8IXZ3 490 aa24.11■■□□□ 1.45
SIKE1-207ENST00000474562 ZNF541Q9H0D2 1346 aa24.1■■□□□ 1.45
SIKE1-207ENST00000474562 PI4KAP2A4QPH2 592 aa24.1■■□□□ 1.45
SIKE1-207ENST00000474562 IQCA1LA6NCM1 817 aa24.1■■□□□ 1.45
SIKE1-207ENST00000474562 NEXNQ0ZGT2 675 aa24.1■■□□□ 1.45
SIKE1-207ENST00000474562 SF3B3Q15393 1217 aaKnown RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms