RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 ANKRD1Q15327 319 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 PRAM1Q96QH2 718 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 CDK19Q9BWU1 502 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 TM6SF1Q9BZW5 370 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 TSPYL1Q9H0U9 437 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 OGFRQ9NZT2 677 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 LIMCH1Q9UPQ0 1083 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 TUBGCP6Q96RT7 1819 aa9.56□□□□□ -0.88
CCDC93-208ENST00000474546 SMTNL1A8MU46 457 aa9.56□□□□□ -0.88
CCDC93-208ENST00000474546 CTIFO43310 598 aaKnown RBP9.56□□□□□ -0.88
CCDC93-208ENST00000474546 ADCY5O95622 1261 aa9.56□□□□□ -0.88
CCDC93-208ENST00000474546 HSPA4P34932 840 aa9.56□□□□□ -0.88
CCDC93-208ENST00000474546 PSME1Q06323 249 aa9.56□□□□□ -0.88
CCDC93-208ENST00000474546 MPNDQ8N594 471 aa9.56□□□□□ -0.88
CCDC93-208ENST00000474546 GPATCH3Q96I76 525 aa9.56□□□□□ -0.88
CCDC93-208ENST00000474546 OVOS2A0A0G2JMS6 1433 aa9.56□□□□□ -0.88
CCDC93-208ENST00000474546 OVOS2A0A0J9YW53 1432 aa9.56□□□□□ -0.88
CCDC93-208ENST00000474546 OVOS2Q6IE36 1432 aa9.56□□□□□ -0.88
CCDC93-208ENST00000474546 AKAP12Q02952 1782 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 RPAP1Q9BWH6 1393 aaPredicted RBP9.55□□□□□ -0.88
CCDC93-208ENST00000474546 CDC25BP30305 580 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 KRT28Q7Z3Y7 464 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 CNTROBQ8N137 903 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 ZGPATQ8N5A5 531 aaKnown RBP9.55□□□□□ -0.88
CCDC93-208ENST00000474546 KIAA1524Q8TCG1 905 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 FAM200AQ8TCP9 573 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 SCAND2PQ9GZW5 306 aaPredicted RBP9.55□□□□□ -0.88
CCDC93-208ENST00000474546 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 ANO2Q9NQ90 1003 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 DDX19AQ9NUU7 478 aaKnown RBP9.55□□□□□ -0.88
CCDC93-208ENST00000474546 SMC3Q9UQE7 1217 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 TECPR2O15040 1411 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 RAD50Q92878 1312 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 KIF1AQ12756 1690 aa9.55□□□□□ -0.88
CCDC93-208ENST00000474546 METP08581 1390 aa9.54□□□□□ -0.88
CCDC93-208ENST00000474546 NRXN3Q9Y4C0 1643 aa9.54□□□□□ -0.88
CCDC93-208ENST00000474546 STX6O43752 255 aa9.54□□□□□ -0.88
CCDC93-208ENST00000474546 CHMLP26374 656 aa9.54□□□□□ -0.88
CCDC93-208ENST00000474546 CCDC30Q5VVM6 783 aa9.54□□□□□ -0.88
CCDC93-208ENST00000474546 TICAM2Q86XR7 235 aa9.54□□□□□ -0.88
CCDC93-208ENST00000474546 ANKRD7Q92527 254 aa9.54□□□□□ -0.88
CCDC93-208ENST00000474546 AK9Q5TCS8 1911 aa9.54□□□□□ -0.88
CCDC93-208ENST00000474546 TTC41PQ6P2S7 1318 aa9.54□□□□□ -0.88
CCDC93-208ENST00000474546 MINK1Q8N4C8 1332 aaPredicted RBP9.54□□□□□ -0.88
CCDC93-208ENST00000474546 SALL3Q9BXA9 1300 aa9.54□□□□□ -0.88
CCDC93-208ENST00000474546 QSER1Q2KHR3 1735 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 PEAK1Q9H792 1746 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 CTAGE5O15320 804 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 CCP110O43303 1012 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 F13A1P00488 732 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 ZKSCAN1P17029 563 aaPredicted RBP9.53□□□□□ -0.88
CCDC93-208ENST00000474546 PSMA5P28066 241 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 KRT85P78386 507 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 ATP8B2P98198 1209 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 SLFNL1Q499Z3 407 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 VPS53Q5VIR6 699 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 ATL3Q6DD88 541 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 USP48Q86UV5 1035 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 ERC1Q8IUD2 1116 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 TSPYL6Q8N831 410 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 C8orf58Q8NAV2 365 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 CABP1Q9NZU7 370 aa9.53□□□□□ -0.88
CCDC93-208ENST00000474546 RBM27Q9P2N5 1060 aaKnown RBP9.53□□□□□ -0.88
CCDC93-208ENST00000474546 GOLGA6L4A6NEF3 574 aa9.52□□□□□ -0.89
CCDC93-208ENST00000474546 ZSCAN20P17040 1043 aaPredicted RBP9.52□□□□□ -0.89
CCDC93-208ENST00000474546 MAP3K11Q16584 847 aa9.52□□□□□ -0.89
CCDC93-208ENST00000474546 PPP4R3BQ5MIZ7 849 aa9.52□□□□□ -0.89
CCDC93-208ENST00000474546 RNF214Q8ND24 703 aa9.52□□□□□ -0.89
CCDC93-208ENST00000474546 SLC17A8Q8NDX2 589 aa9.52□□□□□ -0.89
CCDC93-208ENST00000474546 ALDH8A1Q9H2A2 487 aaPredicted RBP9.52□□□□□ -0.89
CCDC93-208ENST00000474546 CD2APQ9Y5K6 639 aa9.52□□□□□ -0.89
CCDC93-208ENST00000474546 CCDC61Q9Y6R9 512 aa9.52□□□□□ -0.89
CCDC93-208ENST00000474546 PARP4Q9UKK3 1724 aaKnown RBP9.51□□□□□ -0.89
CCDC93-208ENST00000474546 TRIM6-TRIM34B2RNG4 842 aa9.51□□□□□ -0.89
CCDC93-208ENST00000474546 WASLO00401 505 aaPredicted RBP9.51□□□□□ -0.89
CCDC93-208ENST00000474546 HOXB7P09629 217 aa9.51□□□□□ -0.89
CCDC93-208ENST00000474546 PKP1Q13835 747 aa9.51□□□□□ -0.89
CCDC93-208ENST00000474546 HABP4Q5JVS0 413 aaKnown RBP9.51□□□□□ -0.89
CCDC93-208ENST00000474546 CCDC112Q8NEF3 446 aa9.51□□□□□ -0.89
CCDC93-208ENST00000474546 KIF1BPQ96EK5 621 aa9.51□□□□□ -0.89
CCDC93-208ENST00000474546 PHACTR3Q96KR7 559 aa9.51□□□□□ -0.89
CCDC93-208ENST00000474546 KCND1Q9NSA2 647 aa9.51□□□□□ -0.89
CCDC93-208ENST00000474546 CICQ96RK0 1608 aaPredicted RBP9.51□□□□□ -0.89
CCDC93-208ENST00000474546 USP42Q9H9J4 1324 aaKnown RBP9.51□□□□□ -0.89
CCDC93-208ENST00000474546 SBNO1A3KN83 1393 aa9.5□□□□□ -0.89
CCDC93-208ENST00000474546 GLRX3O76003 335 aaKnown RBP9.5□□□□□ -0.89
CCDC93-208ENST00000474546 TPM1P09493 284 aa9.5□□□□□ -0.89
CCDC93-208ENST00000474546 NUP62CLQ9H1M0 184 aa9.5□□□□□ -0.89
CCDC93-208ENST00000474546 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
CCDC93-208ENST00000474546 WBP1LQ9NX94 342 aa9.5□□□□□ -0.89
CCDC93-208ENST00000474546 PODXL2Q9NZ53 605 aa9.5□□□□□ -0.89
CCDC93-208ENST00000474546 TTC21AQ8NDW8 1320 aa9.5□□□□□ -0.89
CCDC93-208ENST00000474546 TNRC6CQ9HCJ0 1690 aaKnown RBP9.49□□□□□ -0.89
CCDC93-208ENST00000474546 CRYBG1Q9Y4K1 1723 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 SGSM2O43147 1006 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 SLC4A2P04920 1241 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 HMOX1P09601 288 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 HSPA8P11142 646 aaKnown RBP9.49□□□□□ -0.89
CCDC93-208ENST00000474546 KCNJ6P48051 423 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 GSDMDP57764 484 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms