RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 SLC51AQ86UW1 340 aa23.25■■□□□ 1.31
EFNA1-204ENST00000474413 NYXQ9GZU5 481 aa23.25■■□□□ 1.31
EFNA1-204ENST00000474413 TCERG1O14776 1098 aaKnown RBP23.24■■□□□ 1.31
EFNA1-204ENST00000474413 SYNE4Q8N205 404 aa23.24■■□□□ 1.31
EFNA1-204ENST00000474413 ZNF428Q96B54 188 aa23.24■■□□□ 1.31
EFNA1-204ENST00000474413 MASTLQ96GX5 879 aa23.24■■□□□ 1.31
EFNA1-204ENST00000474413 ISCA1Q9BUE6 129 aa23.24■■□□□ 1.31
EFNA1-204ENST00000474413 COL4A1P02462 1669 aa23.24■■□□□ 1.31
EFNA1-204ENST00000474413 ANKRD13DQ6ZTN6 518 aa23.23■■□□□ 1.31
EFNA1-204ENST00000474413 C7orf43Q8WVR3 580 aa23.23■■□□□ 1.31
EFNA1-204ENST00000474413 EXOSC9Q06265 439 aaKnown RBP23.22■■□□□ 1.31
EFNA1-204ENST00000474413 CCDC30Q5VVM6 783 aa23.22■■□□□ 1.31
EFNA1-204ENST00000474413 C21orf2O43822 256 aa23.21■■□□□ 1.31
EFNA1-204ENST00000474413 NPR1P16066 1061 aa23.21■■□□□ 1.31
EFNA1-204ENST00000474413 HSP90AB3PQ58FF7 597 aa23.21■■□□□ 1.31
EFNA1-204ENST00000474413 G2E3Q7L622 706 aa23.21■■□□□ 1.31
EFNA1-204ENST00000474413 UTP14AQ9BVJ6 771 aaKnown RBP23.21■■□□□ 1.31
EFNA1-204ENST00000474413 VAMP4O75379 141 aa23.2■■□□□ 1.3
EFNA1-204ENST00000474413 C9orf131Q5VYM1 1079 aa23.2■■□□□ 1.3
EFNA1-204ENST00000474413 OLFM4Q6UX06 510 aa23.2■■□□□ 1.3
EFNA1-204ENST00000474413 ZNF219Q9P2Y4 722 aaPredicted RBP23.2■■□□□ 1.3
EFNA1-204ENST00000474413 CCDC88AQ3V6T2 1871 aa23.19■■□□□ 1.3
EFNA1-204ENST00000474413 RNF123Q5XPI4 1314 aa23.19■■□□□ 1.3
EFNA1-204ENST00000474413 ATP5J2-PTCD1G3V325 749 aa23.19■■□□□ 1.3
EFNA1-204ENST00000474413 SLC10A5Q5PT55 438 aa23.19■■□□□ 1.3
EFNA1-204ENST00000474413 PPP1R42Q7Z4L9 355 aa23.19■■□□□ 1.3
EFNA1-204ENST00000474413 MIER1Q8N108 512 aa23.19■■□□□ 1.3
EFNA1-204ENST00000474413 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
EFNA1-204ENST00000474413 GTF2E1P29083 439 aaPredicted RBP23.18■■□□□ 1.3
EFNA1-204ENST00000474413 HOXA10P31260 410 aaPredicted RBP23.18■■□□□ 1.3
EFNA1-204ENST00000474413 DIEXFQ68CQ4 756 aaKnown RBP23.18■■□□□ 1.3
EFNA1-204ENST00000474413 HCLS1P14317 486 aaPredicted RBP23.16■■□□□ 1.3
EFNA1-204ENST00000474413 GOLGA2Q08379 1002 aa23.16■■□□□ 1.3
EFNA1-204ENST00000474413 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
EFNA1-204ENST00000474413 DICER1Q9UPY3 1922 aaKnown RBP23.16■■□□□ 1.3
EFNA1-204ENST00000474413 TAF1P21675 1872 aa23.15■■□□□ 1.3
EFNA1-204ENST00000474413 CACNA1FO60840 1977 aa23.15■■□□□ 1.3
EFNA1-204ENST00000474413 MYH16Q9H6N6 1097 aa23.15■■□□□ 1.3
EFNA1-204ENST00000474413 RNF181Q9P0P0 153 aa23.15■■□□□ 1.3
EFNA1-204ENST00000474413 TRMT112Q9UI30 125 aaKnown RBP23.15■■□□□ 1.3
EFNA1-204ENST00000474413 SH3TC1Q8TE82 1336 aa23.14■■□□□ 1.3
EFNA1-204ENST00000474413 LTBP3Q9NS15 1303 aa23.14■■□□□ 1.3
EFNA1-204ENST00000474413 RIC3Q7Z5B4 369 aa23.14■■□□□ 1.29
EFNA1-204ENST00000474413 MYD88Q99836 296 aa23.14■■□□□ 1.29
EFNA1-204ENST00000474413 LRRC37AA6NMS7 1700 aa23.13■■□□□ 1.29
EFNA1-204ENST00000474413 SLC4A2P04920 1241 aa23.13■■□□□ 1.29
EFNA1-204ENST00000474413 ZNF526Q8TF50 670 aaPredicted RBP23.13■■□□□ 1.29
EFNA1-204ENST00000474413 FAM89AQ96GI7 184 aa23.13■■□□□ 1.29
EFNA1-204ENST00000474413 METTL22Q9BUU2 404 aaPredicted RBP23.13■■□□□ 1.29
EFNA1-204ENST00000474413 MAP3K2Q9Y2U5 619 aa23.13■■□□□ 1.29
EFNA1-204ENST00000474413 COL4A5P29400 1685 aa23.13■■□□□ 1.29
EFNA1-204ENST00000474413 PI4KAP2A4QPH2 592 aa23.12■■□□□ 1.29
EFNA1-204ENST00000474413 IGKV5-2P06315 115 aa23.12■■□□□ 1.29
EFNA1-204ENST00000474413 PI4KAP1Q8N8J0 262 aa23.12■■□□□ 1.29
EFNA1-204ENST00000474413 STK31Q9BXU1 1019 aa23.12■■□□□ 1.29
EFNA1-204ENST00000474413 ABCC4O15439 1325 aa23.11■■□□□ 1.29
EFNA1-204ENST00000474413 LMNB1P20700 586 aa23.11■■□□□ 1.29
EFNA1-204ENST00000474413 FLIIQ13045 1269 aa23.11■■□□□ 1.29
EFNA1-204ENST00000474413 KSR2Q6VAB6 950 aa23.11■■□□□ 1.29
EFNA1-204ENST00000474413 CDCA7LQ96GN5 454 aa23.11■■□□□ 1.29
EFNA1-204ENST00000474413 CRAMP1Q96RY5 1269 aa23.11■■□□□ 1.29
EFNA1-204ENST00000474413 SLFN5Q08AF3 891 aa23.1■■□□□ 1.29
EFNA1-204ENST00000474413 RTL5Q5HYW3 569 aaPredicted RBP23.1■■□□□ 1.29
EFNA1-204ENST00000474413 RPGRQ92834 1020 aaKnown RBP23.1■■□□□ 1.29
EFNA1-204ENST00000474413 CHMP4AQ9BY43 222 aa23.1■■□□□ 1.29
EFNA1-204ENST00000474413 CCDC93Q567U6 631 aa23.09■■□□□ 1.29
EFNA1-204ENST00000474413 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
EFNA1-204ENST00000474413 TAOK3Q9H2K8 898 aa23.09■■□□□ 1.29
EFNA1-204ENST00000474413 DUOX1Q9NRD9 1551 aa23.09■■□□□ 1.29
EFNA1-204ENST00000474413 DDX58O95786 925 aaKnown RBP23.08■■□□□ 1.29
EFNA1-204ENST00000474413 ALDH1B1P30837 517 aa23.08■■□□□ 1.29
EFNA1-204ENST00000474413 LTBP1Q14766 1721 aa23.08■■□□□ 1.28
EFNA1-204ENST00000474413 E9PSI1 815 aa23.07■■□□□ 1.28
EFNA1-204ENST00000474413 SOGA3Q5TF21 947 aa23.07■■□□□ 1.28
EFNA1-204ENST00000474413 TRMT2AQ8IZ69 625 aaKnown RBP23.07■■□□□ 1.28
EFNA1-204ENST00000474413 ZBTB38Q8NAP3 1195 aaPredicted RBP23.07■■□□□ 1.28
EFNA1-204ENST00000474413 CCDC191Q8NCU4 936 aa23.07■■□□□ 1.28
EFNA1-204ENST00000474413 JARID2Q92833 1246 aaPredicted RBP23.07■■□□□ 1.28
EFNA1-204ENST00000474413 KIF3CO14782 793 aa23.06■■□□□ 1.28
EFNA1-204ENST00000474413 CWF19L2Q2TBE0 894 aaKnown RBP23.06■■□□□ 1.28
EFNA1-204ENST00000474413 RBM17Q96I25 401 aaKnown RBP23.06■■□□□ 1.28
EFNA1-204ENST00000474413 GPBP1L1Q9HC44 474 aaPredicted RBP23.06■■□□□ 1.28
EFNA1-204ENST00000474413 ZC3H4Q9UPT8 1303 aaKnown RBP23.06■■□□□ 1.28
EFNA1-204ENST00000474413 PPEF1O14829 653 aaPredicted RBP23.05■■□□□ 1.28
EFNA1-204ENST00000474413 PCCAP05165 728 aaPredicted RBP23.05■■□□□ 1.28
EFNA1-204ENST00000474413 FKBP4Q02790 459 aaKnown RBP eCLIP23.05■■□□□ 1.28
EFNA1-204ENST00000474413 NMRK2Q9NPI5 230 aa23.05■■□□□ 1.28
EFNA1-204ENST00000474413 CWC25Q9NXE8 425 aaPredicted RBP23.05■■□□□ 1.28
EFNA1-204ENST00000474413 NEURL1BA8MQ27 555 aa23.04■■□□□ 1.28
EFNA1-204ENST00000474413 IRS4O14654 1257 aaPredicted RBP23.04■■□□□ 1.28
EFNA1-204ENST00000474413 SF3B3Q15393 1217 aaKnown RBP23.04■■□□□ 1.28
EFNA1-204ENST00000474413 ZNF277Q9NRM2 450 aaPredicted RBP23.04■■□□□ 1.28
EFNA1-204ENST00000474413 FKBP5Q13451 457 aaPredicted RBP23.03■■□□□ 1.28
EFNA1-204ENST00000474413 MYH3P11055 1940 aa23.02■■□□□ 1.28
EFNA1-204ENST00000474413 F6X3S4 739 aa23.02■■□□□ 1.28
EFNA1-204ENST00000474413 WDR90Q96KV7 1748 aa23.02■■□□□ 1.28
EFNA1-204ENST00000474413 GRAPQ13588 217 aa23.01■■□□□ 1.27
EFNA1-204ENST00000474413 RTKN2Q8IZC4 609 aa23.01■■□□□ 1.27
EFNA1-204ENST00000474413 GRAPLQ8TC17 118 aaPredicted RBP23.01■■□□□ 1.27
EFNA1-204ENST00000474413 DNAAF4Q8WXU2 420 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms