RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 LINS1Q8NG48 757 aa17.18■□□□□ 0.34
LDLRAP1-204ENST00000474283 LAMB2P55268 1798 aa17.17■□□□□ 0.34
LDLRAP1-204ENST00000474283 FAM177BA6PVY3 158 aa17.17■□□□□ 0.34
LDLRAP1-204ENST00000474283 IGKV5-2P06315 115 aa17.17■□□□□ 0.34
LDLRAP1-204ENST00000474283 INTS3Q68E01 1043 aaKnown RBP17.17■□□□□ 0.34
LDLRAP1-204ENST00000474283 DDX60Q8IY21 1712 aaKnown RBP17.17■□□□□ 0.34
LDLRAP1-204ENST00000474283 NEURL1BA8MQ27 555 aa17.16■□□□□ 0.34
LDLRAP1-204ENST00000474283 RGL2O15211 777 aa17.16■□□□□ 0.34
LDLRAP1-204ENST00000474283 ZNF34Q8IZ26 560 aa17.16■□□□□ 0.34
LDLRAP1-204ENST00000474283 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
LDLRAP1-204ENST00000474283 ISCA1Q9BUE6 129 aa17.16■□□□□ 0.34
LDLRAP1-204ENST00000474283 CWC25Q9NXE8 425 aaPredicted RBP17.16■□□□□ 0.34
LDLRAP1-204ENST00000474283 ALDH1L1O75891 902 aa17.15■□□□□ 0.34
LDLRAP1-204ENST00000474283 NFIXQ14938 502 aa17.15■□□□□ 0.34
LDLRAP1-204ENST00000474283 NLGN1Q8N2Q7 840 aa17.15■□□□□ 0.34
LDLRAP1-204ENST00000474283 CCDC191Q8NCU4 936 aa17.15■□□□□ 0.34
LDLRAP1-204ENST00000474283 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
LDLRAP1-204ENST00000474283 NRXN2Q9P2S2 1712 aa17.14■□□□□ 0.33
LDLRAP1-204ENST00000474283 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
LDLRAP1-204ENST00000474283 PARP10Q53GL7 1025 aa17.14■□□□□ 0.33
LDLRAP1-204ENST00000474283 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
LDLRAP1-204ENST00000474283 SLC16A10Q8TF71 515 aa17.14■□□□□ 0.33
LDLRAP1-204ENST00000474283 C9orf78Q9NZ63 289 aaPredicted RBP17.14■□□□□ 0.33
LDLRAP1-204ENST00000474283 CARMIL3Q8ND23 1372 aa17.14■□□□□ 0.33
LDLRAP1-204ENST00000474283 NPHP1O15259 732 aa17.13■□□□□ 0.33
LDLRAP1-204ENST00000474283 GNAI3P08754 354 aa17.13■□□□□ 0.33
LDLRAP1-204ENST00000474283 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
LDLRAP1-204ENST00000474283 GCKRQ14397 625 aa17.13■□□□□ 0.33
LDLRAP1-204ENST00000474283 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
LDLRAP1-204ENST00000474283 PPP1R42Q7Z4L9 355 aa17.13■□□□□ 0.33
LDLRAP1-204ENST00000474283 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
LDLRAP1-204ENST00000474283 ZBTB40Q9NUA8 1239 aa17.13■□□□□ 0.33
LDLRAP1-204ENST00000474283 LRP5O75197 1615 aa17.13■□□□□ 0.33
LDLRAP1-204ENST00000474283 CACNA1SQ13698 1873 aa17.12■□□□□ 0.33
LDLRAP1-204ENST00000474283 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
LDLRAP1-204ENST00000474283 MMP10P09238 476 aa17.12■□□□□ 0.33
LDLRAP1-204ENST00000474283 SUSD4Q5VX71 490 aa17.12■□□□□ 0.33
LDLRAP1-204ENST00000474283 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
LDLRAP1-204ENST00000474283 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
LDLRAP1-204ENST00000474283 GRM8O00222 908 aa17.11■□□□□ 0.33
LDLRAP1-204ENST00000474283 HMMRO75330 724 aa17.11■□□□□ 0.33
LDLRAP1-204ENST00000474283 GTF2E1P29083 439 aaPredicted RBP17.11■□□□□ 0.33
LDLRAP1-204ENST00000474283 TM4SF1P30408 202 aa17.11■□□□□ 0.33
LDLRAP1-204ENST00000474283 HDAC1Q13547 482 aaPredicted RBP17.11■□□□□ 0.33
LDLRAP1-204ENST00000474283 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
LDLRAP1-204ENST00000474283 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
LDLRAP1-204ENST00000474283 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
LDLRAP1-204ENST00000474283 PARP3Q9Y6F1 533 aa17.11■□□□□ 0.33
LDLRAP1-204ENST00000474283 SPEF2Q9C093 1822 aa17.11■□□□□ 0.33
LDLRAP1-204ENST00000474283 TAF1P21675 1872 aa17.1■□□□□ 0.33
LDLRAP1-204ENST00000474283 DDR1Q08345 913 aa17.1■□□□□ 0.33
LDLRAP1-204ENST00000474283 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
LDLRAP1-204ENST00000474283 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
LDLRAP1-204ENST00000474283 MEIS3Q99687 375 aa17.1■□□□□ 0.33
LDLRAP1-204ENST00000474283 NYXQ9GZU5 481 aa17.1■□□□□ 0.33
LDLRAP1-204ENST00000474283 KDM2BQ8NHM5 1336 aa17.1■□□□□ 0.33
LDLRAP1-204ENST00000474283 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
LDLRAP1-204ENST00000474283 NTSR2O95665 410 aa17.09■□□□□ 0.33
LDLRAP1-204ENST00000474283 SERPINB2P05120 415 aa17.09■□□□□ 0.33
LDLRAP1-204ENST00000474283 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
LDLRAP1-204ENST00000474283 ZBTB38Q8NAP3 1195 aaPredicted RBP17.09■□□□□ 0.33
LDLRAP1-204ENST00000474283 MTFR1LQ9H019 292 aa17.09■□□□□ 0.33
LDLRAP1-204ENST00000474283 USP44Q9H0E7 712 aa17.09■□□□□ 0.33
LDLRAP1-204ENST00000474283 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
LDLRAP1-204ENST00000474283 SH3TC1Q8TE82 1336 aa17.08■□□□□ 0.32
LDLRAP1-204ENST00000474283 ZBTB7BO15156 539 aaPredicted RBP17.08■□□□□ 0.32
LDLRAP1-204ENST00000474283 PCCAP05165 728 aaPredicted RBP17.08■□□□□ 0.32
LDLRAP1-204ENST00000474283 NBPF7P0C2Y1 421 aaPredicted RBP17.08■□□□□ 0.32
LDLRAP1-204ENST00000474283 UBTFL1P0CB47 393 aaPredicted RBP17.08■□□□□ 0.32
LDLRAP1-204ENST00000474283 TPTE2Q6XPS3 522 aa17.08■□□□□ 0.32
LDLRAP1-204ENST00000474283 SYNE4Q8N205 404 aa17.08■□□□□ 0.32
LDLRAP1-204ENST00000474283 CCDC24Q8N4L8 307 aa17.08■□□□□ 0.32
LDLRAP1-204ENST00000474283 CNBD1Q8NA66 436 aa17.08■□□□□ 0.32
LDLRAP1-204ENST00000474283 GCC1Q96CN9 775 aa17.08■□□□□ 0.32
LDLRAP1-204ENST00000474283 IBTKQ9P2D0 1353 aaPredicted RBP17.07■□□□□ 0.32
LDLRAP1-204ENST00000474283 H7C1W4 665 aa17.07■□□□□ 0.32
LDLRAP1-204ENST00000474283 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
LDLRAP1-204ENST00000474283 RPAP2Q8IXW5 612 aaPredicted RBP17.07■□□□□ 0.32
LDLRAP1-204ENST00000474283 KIF13BQ9NQT8 1826 aa17.07■□□□□ 0.32
LDLRAP1-204ENST00000474283 POLD1P28340 1107 aa17.06■□□□□ 0.32
LDLRAP1-204ENST00000474283 ST5P78524 1137 aa17.06■□□□□ 0.32
LDLRAP1-204ENST00000474283 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
LDLRAP1-204ENST00000474283 UTYO14607 1347 aa17.05■□□□□ 0.32
LDLRAP1-204ENST00000474283 IRS4O14654 1257 aaPredicted RBP17.05■□□□□ 0.32
LDLRAP1-204ENST00000474283 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
LDLRAP1-204ENST00000474283 PRR5LQ6MZQ0 368 aa17.05■□□□□ 0.32
LDLRAP1-204ENST00000474283 SUCLG2Q96I99 432 aa17.05■□□□□ 0.32
LDLRAP1-204ENST00000474283 COL11A2P13942 1736 aaPredicted RBP17.04■□□□□ 0.32
LDLRAP1-204ENST00000474283 ABCC12Q96J65 1359 aa17.04■□□□□ 0.32
LDLRAP1-204ENST00000474283 CDHR2Q9BYE9 1310 aa17.04■□□□□ 0.32
LDLRAP1-204ENST00000474283 GNAI2P04899 355 aa17.04■□□□□ 0.32
LDLRAP1-204ENST00000474283 CASP7P55210 303 aa17.04■□□□□ 0.32
LDLRAP1-204ENST00000474283 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
LDLRAP1-204ENST00000474283 DLEC1Q9Y238 1755 aa17.02■□□□□ 0.32
LDLRAP1-204ENST00000474283 HSP90B1P14625 803 aaKnown RBP17.02■□□□□ 0.32
LDLRAP1-204ENST00000474283 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.32
LDLRAP1-204ENST00000474283 SPON1Q9HCB6 807 aa17.02■□□□□ 0.32
LDLRAP1-204ENST00000474283 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
LDLRAP1-204ENST00000474283 PDE8AO60658 829 aa17.01■□□□□ 0.31
LDLRAP1-204ENST00000474283 CHMP3Q9Y3E7 222 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms