RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 KCNQ4P56696 695 aa7.96□□□□□ -1.14
TMEM50B-208ENST00000474272 TRIM28Q13263 835 aaKnown RBP7.96□□□□□ -1.14
TMEM50B-208ENST00000474272 NEUROD1Q13562 356 aa7.96□□□□□ -1.14
TMEM50B-208ENST00000474272 C20orf204Q6ZNR8 217 aa7.96□□□□□ -1.14
TMEM50B-208ENST00000474272 NUDT8Q8WV74 236 aa7.96□□□□□ -1.14
TMEM50B-208ENST00000474272 TPSG1Q9NRR2 321 aa7.96□□□□□ -1.14
TMEM50B-208ENST00000474272 MAFBQ9Y5Q3 323 aaPredicted RBP7.96□□□□□ -1.14
TMEM50B-208ENST00000474272 APBA3O96018 575 aa7.95□□□□□ -1.14
TMEM50B-208ENST00000474272 SEC13P55735 322 aa7.95□□□□□ -1.14
TMEM50B-208ENST00000474272 RSPO4Q2I0M5 234 aaPredicted RBP7.95□□□□□ -1.14
TMEM50B-208ENST00000474272 CRTC2Q53ET0 693 aaPredicted RBP7.95□□□□□ -1.14
TMEM50B-208ENST00000474272 TRAPPC3LQ5T215 181 aa7.95□□□□□ -1.14
TMEM50B-208ENST00000474272 FNBP4Q8N3X1 1017 aaPredicted RBP7.95□□□□□ -1.14
TMEM50B-208ENST00000474272 UBE2OQ9C0C9 1292 aaKnown RBP7.95□□□□□ -1.14
TMEM50B-208ENST00000474272 PRDM6Q9NQX0 595 aa7.94□□□□□ -1.14
TMEM50B-208ENST00000474272 DPYDQ12882 1025 aa7.93□□□□□ -1.14
TMEM50B-208ENST00000474272 PROSER2Q86WR7 435 aaPredicted RBP7.93□□□□□ -1.14
TMEM50B-208ENST00000474272 SLC6A14Q9UN76 642 aa7.93□□□□□ -1.14
TMEM50B-208ENST00000474272 BCS1LQ9Y276 419 aa7.93□□□□□ -1.14
TMEM50B-208ENST00000474272 LILRB5O75023 590 aa7.92□□□□□ -1.14
TMEM50B-208ENST00000474272 NKAPLQ5M9Q1 402 aa7.92□□□□□ -1.14
TMEM50B-208ENST00000474272 LARP1Q6PKG0 1096 aaKnown RBP7.92□□□□□ -1.14
TMEM50B-208ENST00000474272 GSX2Q9BZM3 304 aa7.92□□□□□ -1.14
TMEM50B-208ENST00000474272 JPH1Q9HDC5 661 aaPredicted RBP7.92□□□□□ -1.14
TMEM50B-208ENST00000474272 PTK7Q13308 1070 aa7.91□□□□□ -1.14
TMEM50B-208ENST00000474272 ZMYM1Q5SVZ6 1142 aa7.91□□□□□ -1.14
TMEM50B-208ENST00000474272 KANK4Q5T7N3 995 aaPredicted RBP7.91□□□□□ -1.14
TMEM50B-208ENST00000474272 STAG2Q8N3U4 1231 aa7.91□□□□□ -1.14
TMEM50B-208ENST00000474272 PPP1R12CQ9BZL4 782 aa7.91□□□□□ -1.14
TMEM50B-208ENST00000474272 DNAJB12Q9NXW2 375 aaKnown RBP7.91□□□□□ -1.14
TMEM50B-208ENST00000474272 KLK14Q9P0G3 267 aa7.91□□□□□ -1.14
TMEM50B-208ENST00000474272 NFKB1P19838 968 aa7.9□□□□□ -1.14
TMEM50B-208ENST00000474272 GRNP28799 593 aaKnown RBP7.9□□□□□ -1.14
TMEM50B-208ENST00000474272 FOXD4L6Q3SYB3 417 aaPredicted RBP7.9□□□□□ -1.14
TMEM50B-208ENST00000474272 SHISA2Q6UWI4 295 aa7.9□□□□□ -1.14
TMEM50B-208ENST00000474272 FOXD4L3Q6VB84 417 aaPredicted RBP7.9□□□□□ -1.14
TMEM50B-208ENST00000474272 CALR3Q96L12 384 aaKnown RBP7.9□□□□□ -1.14
TMEM50B-208ENST00000474272 DMGDHQ9UI17 866 aaKnown RBP7.9□□□□□ -1.14
TMEM50B-208ENST00000474272 NAGPAQ9UK23 515 aa7.9□□□□□ -1.14
TMEM50B-208ENST00000474272 A0A0A0MRY4 1105 aa7.89□□□□□ -1.15
TMEM50B-208ENST00000474272 SELPP16109 830 aa7.89□□□□□ -1.15
TMEM50B-208ENST00000474272 LMOD1P29536 600 aaPredicted RBP7.89□□□□□ -1.15
TMEM50B-208ENST00000474272 PSAPL1Q6NUJ1 521 aa7.89□□□□□ -1.15
TMEM50B-208ENST00000474272 KRT25Q7Z3Z0 450 aa7.89□□□□□ -1.15
TMEM50B-208ENST00000474272 DMRTC2Q8IXT2 367 aaPredicted RBP7.89□□□□□ -1.15
TMEM50B-208ENST00000474272 PNMA5Q96PV4 448 aa7.89□□□□□ -1.15
TMEM50B-208ENST00000474272 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.89□□□□□ -1.15
TMEM50B-208ENST00000474272 AFF1P51825 1210 aaKnown RBP7.88□□□□□ -1.15
TMEM50B-208ENST00000474272 RTN1Q16799 776 aa7.88□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L15C9J2P7 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L10C9JJH3 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L13C9JLJ4 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L12C9JPN9 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L11C9JVI0 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L21D6R901 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L18D6R9N7 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L22D6RA61 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L17D6RBQ6 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L19D6RCP7 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L20D6RJB6 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 TGFBR3LH3BV60 316 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 DYRK3O43781 588 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP17L24Q0WX57 530 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 CCINQ13939 588 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 ANKMY2Q8IV38 441 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 NACC1Q96RE7 527 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 USP20Q9Y2K6 914 aa7.87□□□□□ -1.15
TMEM50B-208ENST00000474272 CPB1P15086 417 aa7.86□□□□□ -1.15
TMEM50B-208ENST00000474272 TARSP26639 723 aaKnown RBP7.86□□□□□ -1.15
TMEM50B-208ENST00000474272 IDH3AP50213 366 aa7.86□□□□□ -1.15
TMEM50B-208ENST00000474272 MLLT1Q03111 559 aaPredicted RBP7.86□□□□□ -1.15
TMEM50B-208ENST00000474272 PLAURQ03405 335 aa7.86□□□□□ -1.15
TMEM50B-208ENST00000474272 DGKZQ13574 1117 aa7.86□□□□□ -1.15
TMEM50B-208ENST00000474272 HIF1AQ16665 826 aa7.86□□□□□ -1.15
TMEM50B-208ENST00000474272 CDCA8Q53HL2 280 aa7.86□□□□□ -1.15
TMEM50B-208ENST00000474272 VRTNQ9H8Y1 702 aa7.86□□□□□ -1.15
TMEM50B-208ENST00000474272 ZFATQ9P243 1243 aa7.86□□□□□ -1.15
TMEM50B-208ENST00000474272 RGS9O75916 674 aaPredicted RBP7.85□□□□□ -1.15
TMEM50B-208ENST00000474272 IGFBP4P22692 258 aa7.85□□□□□ -1.15
TMEM50B-208ENST00000474272 INPP5BP32019 993 aa7.85□□□□□ -1.15
TMEM50B-208ENST00000474272 MBTPS1Q14703 1052 aa7.85□□□□□ -1.15
TMEM50B-208ENST00000474272 IER5Q5VY09 327 aa7.85□□□□□ -1.15
TMEM50B-208ENST00000474272 FAM35AQ86V20 835 aa7.85□□□□□ -1.15
TMEM50B-208ENST00000474272 SCO2A0A1W2PP80 73 aa7.84□□□□□ -1.15
TMEM50B-208ENST00000474272 ZBTB42B2RXF5 422 aa7.84□□□□□ -1.15
TMEM50B-208ENST00000474272 C9orf172C9J069 976 aa7.84□□□□□ -1.15
TMEM50B-208ENST00000474272 SASH3O75995 380 aa7.84□□□□□ -1.15
TMEM50B-208ENST00000474272 ELNP15502 786 aa7.84□□□□□ -1.15
TMEM50B-208ENST00000474272 ADGRE1Q14246 886 aa7.84□□□□□ -1.15
TMEM50B-208ENST00000474272 PRSS36Q5K4E3 855 aa7.84□□□□□ -1.15
TMEM50B-208ENST00000474272 ARXQ96QS3 562 aa7.84□□□□□ -1.15
TMEM50B-208ENST00000474272 QTRT2Q9H974 415 aaKnown RBP7.84□□□□□ -1.15
TMEM50B-208ENST00000474272 FAM196BA6NMK8 535 aa7.83□□□□□ -1.16
TMEM50B-208ENST00000474272 RAC1P63000 192 aa7.83□□□□□ -1.16
TMEM50B-208ENST00000474272 HFE2Q6ZVN8 426 aa7.83□□□□□ -1.16
TMEM50B-208ENST00000474272 IFT43Q96FT9 208 aa7.83□□□□□ -1.16
TMEM50B-208ENST00000474272 MICAL2O94851 1124 aa7.82□□□□□ -1.16
TMEM50B-208ENST00000474272 PERM1Q5SV97 790 aa7.82□□□□□ -1.16
TMEM50B-208ENST00000474272 FMR1NBQ8N0W7 255 aaPredicted RBP7.82□□□□□ -1.16
TMEM50B-208ENST00000474272 LENG1Q96BZ8 264 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms