RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 UCN2Q96RP3 112 aa6.45□□□□□ -1.38
ECHDC1-213ENST00000474240 ARID1BQ8NFD5 2236 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-213ENST00000474240 PALM3A6NDB9 673 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-213ENST00000474240 SSTR4P31391 388 aa6.44□□□□□ -1.38
ECHDC1-213ENST00000474240 ATP1A2P50993 1020 aa6.44□□□□□ -1.38
ECHDC1-213ENST00000474240 NEUROD4Q9HD90 331 aa6.44□□□□□ -1.38
ECHDC1-213ENST00000474240 NOD1Q9Y239 953 aa6.44□□□□□ -1.38
ECHDC1-213ENST00000474240 MAFBQ9Y5Q3 323 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-213ENST00000474240 USP17L3A6NCW0 530 aa6.43□□□□□ -1.38
ECHDC1-213ENST00000474240 USP17L4A6NCW7 530 aa6.43□□□□□ -1.38
ECHDC1-213ENST00000474240 EML1O00423 815 aa6.43□□□□□ -1.38
ECHDC1-213ENST00000474240 IRAK1P51617 712 aa6.43□□□□□ -1.38
ECHDC1-213ENST00000474240 USP17L2Q6R6M4 530 aa6.43□□□□□ -1.38
ECHDC1-213ENST00000474240 USP17L1Q7RTZ2 530 aa6.43□□□□□ -1.38
ECHDC1-213ENST00000474240 L3MBTL2Q969R5 705 aa6.43□□□□□ -1.38
ECHDC1-213ENST00000474240 UBE2OQ9C0C9 1292 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-213ENST00000474240 SLC6A14Q9UN76 642 aa6.43□□□□□ -1.38
ECHDC1-213ENST00000474240 ARID3CA6NKF2 412 aa6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 PPP1R15AO75807 674 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 IREB2P48200 963 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 DMRTC2Q8IXT2 367 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 CCDC82Q8N4S0 544 aa6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 RHPN1Q8TCX5 695 aa6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 WFDC12Q8WWY7 111 aa6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 BHMTQ93088 406 aa6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 MEGF10Q96KG7 1140 aa6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 IGFLR1Q9H665 355 aa6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 BRD7Q9NPI1 651 aa6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 TFIP11Q9UBB9 837 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-213ENST00000474240 PIK3CDO00329 1044 aa6.41□□□□□ -1.38
ECHDC1-213ENST00000474240 NOS3P29474 1203 aa6.41□□□□□ -1.38
ECHDC1-213ENST00000474240 NCOA4Q13772 614 aa6.41□□□□□ -1.38
ECHDC1-213ENST00000474240 TBCELQ5QJ74 424 aa6.41□□□□□ -1.38
ECHDC1-213ENST00000474240 SH3PXD2AQ5TCZ1 1133 aa6.41□□□□□ -1.38
ECHDC1-213ENST00000474240 HSH2DQ96JZ2 352 aa6.41□□□□□ -1.38
ECHDC1-213ENST00000474240 SCHIP1Q9P0W5 487 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-213ENST00000474240 NAGPAQ9UK23 515 aa6.41□□□□□ -1.38
ECHDC1-213ENST00000474240 ZNF232Q9UNY5 417 aa6.41□□□□□ -1.38
ECHDC1-213ENST00000474240 RBM19Q9Y4C8 960 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-213ENST00000474240 AFF1P51825 1210 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-213ENST00000474240 PSAPL1Q6NUJ1 521 aa6.4□□□□□ -1.38
ECHDC1-213ENST00000474240 PRR23CQ6ZRP0 262 aa6.4□□□□□ -1.38
ECHDC1-213ENST00000474240 CEP63Q96MT8 703 aa6.4□□□□□ -1.38
ECHDC1-213ENST00000474240 SUPT5HO00267 1087 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-213ENST00000474240 TAL1P17542 331 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-213ENST00000474240 LMOD1P29536 600 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-213ENST00000474240 NOS2P35228 1153 aa6.39□□□□□ -1.39
ECHDC1-213ENST00000474240 TEAD4Q15561 434 aa6.39□□□□□ -1.39
ECHDC1-213ENST00000474240 CFAP70Q5T0N1 1121 aa6.39□□□□□ -1.39
ECHDC1-213ENST00000474240 PBXIP1Q96AQ6 731 aa6.39□□□□□ -1.39
ECHDC1-213ENST00000474240 VRTNQ9H8Y1 702 aa6.39□□□□□ -1.39
ECHDC1-213ENST00000474240 RNF114Q9Y508 228 aa6.39□□□□□ -1.39
ECHDC1-213ENST00000474240 FAM196BA6NMK8 535 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 FSTP19883 344 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 CD97P48960 835 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 TYRO3Q06418 890 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 FZD5Q13467 585 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 LARP1Q6PKG0 1096 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 SLC9A9Q8IVB4 645 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 LARGE2Q8N3Y3 721 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 C7orf43Q8WVR3 580 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 C1orf115Q9H7X2 142 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 MKRN1Q9UHC7 482 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 KCNH4Q9UQ05 1017 aa6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 GPC6Q9Y625 555 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 OAS3Q9Y6K5 1087 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-213ENST00000474240 BACH1O14867 736 aa6.37□□□□□ -1.39
ECHDC1-213ENST00000474240 GTF2IP78347 998 aa6.37□□□□□ -1.39
ECHDC1-213ENST00000474240 ZNF358Q9NW07 568 aa6.37□□□□□ -1.39
ECHDC1-213ENST00000474240 DNAJB12Q9NXW2 375 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-213ENST00000474240 PCDHGA11Q9Y5H2 935 aa6.37□□□□□ -1.39
ECHDC1-213ENST00000474240 KCNQ4P56696 695 aa6.36□□□□□ -1.39
ECHDC1-213ENST00000474240 PSME1Q06323 249 aa6.36□□□□□ -1.39
ECHDC1-213ENST00000474240 PDE4CQ08493 712 aa6.36□□□□□ -1.39
ECHDC1-213ENST00000474240 SIX5Q8N196 739 aa6.36□□□□□ -1.39
ECHDC1-213ENST00000474240 DEPDC4Q8N2C3 294 aa6.36□□□□□ -1.39
ECHDC1-213ENST00000474240 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
ECHDC1-213ENST00000474240 ACIN1Q9UKV3 1341 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 SERTM1A2A2V5 107 aa6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 SFI1A8K8P3 1242 aa6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 M0R2N6 131 aa6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 RGS9O75916 674 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 RASA1P20936 1047 aa6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 EPHA4P54764 986 aa6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 ELOAQ14241 798 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 ILDR2Q71H61 639 aa6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 OGFOD1Q8N543 542 aa6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 ZNF280CQ8ND82 737 aa6.35□□□□□ -1.39
ECHDC1-213ENST00000474240 ATG7O95352 703 aa6.34□□□□□ -1.39
ECHDC1-213ENST00000474240 RFX1P22670 979 aa6.34□□□□□ -1.39
ECHDC1-213ENST00000474240 GP2P55259 537 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-213ENST00000474240 KANK4Q5T7N3 995 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-213ENST00000474240 MSL1Q68DK7 614 aa6.34□□□□□ -1.39
ECHDC1-213ENST00000474240 FBXO11Q86XK2 927 aa6.34□□□□□ -1.39
ECHDC1-213ENST00000474240 USP17L15C9J2P7 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 USP17L10C9JJH3 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 USP17L13C9JLJ4 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 USP17L12C9JPN9 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 USP17L11C9JVI0 530 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms