RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 FAM161AQ3B820 660 aa26.89■■□□□ 1.89
APP-215ENST00000474136 CFAP53Q96M91 514 aa26.89■■□□□ 1.89
APP-215ENST00000474136 MIS18AQ9NYP9 233 aa26.89■■□□□ 1.89
APP-215ENST00000474136 LTBP1Q14766 1721 aa26.88■■□□□ 1.89
APP-215ENST00000474136 U2AF1L5P0DN76 240 aaPredicted RBP26.88■■□□□ 1.89
APP-215ENST00000474136 SCNN1DP51172 638 aa26.88■■□□□ 1.89
APP-215ENST00000474136 U2AF1Q01081 240 aaKnown RBP eCLIP26.88■■□□□ 1.89
APP-215ENST00000474136 LMOD1P29536 600 aaPredicted RBP26.87■■□□□ 1.89
APP-215ENST00000474136 GRM1Q13255 1194 aa26.87■■□□□ 1.89
APP-215ENST00000474136 PAXIP1Q6ZW49 1069 aaPredicted RBP26.87■■□□□ 1.89
APP-215ENST00000474136 CAPNS2Q96L46 248 aa26.87■■□□□ 1.89
APP-215ENST00000474136 CYP4F22Q6NT55 531 aa26.86■■□□□ 1.89
APP-215ENST00000474136 NUDCQ9Y266 331 aa26.86■■□□□ 1.89
APP-215ENST00000474136 TRAF5O00463 557 aa26.85■■□□□ 1.89
APP-215ENST00000474136 CC2D2BQ6DHV5 1058 aa26.85■■□□□ 1.89
APP-215ENST00000474136 LARGE2Q8N3Y3 721 aa26.85■■□□□ 1.89
APP-215ENST00000474136 NYXQ9GZU5 481 aa26.85■■□□□ 1.89
APP-215ENST00000474136 TCERG1O14776 1098 aaKnown RBP26.84■■□□□ 1.89
APP-215ENST00000474136 TAF7Q15545 349 aaPredicted RBP26.84■■□□□ 1.89
APP-215ENST00000474136 CST9Q5W186 159 aa26.84■■□□□ 1.89
APP-215ENST00000474136 RPGRQ92834 1020 aaKnown RBP26.84■■□□□ 1.89
APP-215ENST00000474136 SLC34A2O95436 690 aa26.83■■□□□ 1.89
APP-215ENST00000474136 GPTP24298 496 aa26.83■■□□□ 1.89
APP-215ENST00000474136 TTLL7Q6ZT98 887 aa26.83■■□□□ 1.89
APP-215ENST00000474136 HOXA10P31260 410 aaPredicted RBP26.82■■□□□ 1.88
APP-215ENST00000474136 GPR101Q96P66 508 aaPredicted RBP26.82■■□□□ 1.88
APP-215ENST00000474136 MAP3K15Q6ZN16 1313 aa26.82■■□□□ 1.88
APP-215ENST00000474136 ERVV-1B6SEH8 477 aa26.81■■□□□ 1.88
APP-215ENST00000474136 HTATSF1O43719 755 aaKnown RBP26.81■■□□□ 1.88
APP-215ENST00000474136 TSKSQ9UJT2 592 aa26.81■■□□□ 1.88
APP-215ENST00000474136 UBN2Q6ZU65 1347 aa26.81■■□□□ 1.88
APP-215ENST00000474136 ECE1P42892 770 aa26.8■■□□□ 1.88
APP-215ENST00000474136 SUSD4Q5VX71 490 aa26.8■■□□□ 1.88
APP-215ENST00000474136 C3orf67Q6ZVT6 689 aa26.8■■□□□ 1.88
APP-215ENST00000474136 RRP7AQ9Y3A4 280 aaKnown RBP26.8■■□□□ 1.88
APP-215ENST00000474136 CCDC85CA6NKD9 419 aa26.79■■□□□ 1.88
APP-215ENST00000474136 USP50Q70EL3 339 aaPredicted RBP26.79■■□□□ 1.88
APP-215ENST00000474136 BEGAINQ9BUH8 593 aa26.79■■□□□ 1.88
APP-215ENST00000474136 THSD7BQ9C0I4 1608 aa26.78■■□□□ 1.88
APP-215ENST00000474136 PPEF1O14829 653 aaPredicted RBP26.78■■□□□ 1.88
APP-215ENST00000474136 AOC2O75106 756 aa26.78■■□□□ 1.88
APP-215ENST00000474136 NIM1KQ8IY84 436 aa26.78■■□□□ 1.88
APP-215ENST00000474136 ZBTB3Q9H5J0 574 aa26.78■■□□□ 1.88
APP-215ENST00000474136 TLL2Q9Y6L7 1015 aa26.78■■□□□ 1.88
APP-215ENST00000474136 MYL6BP14649 208 aa26.77■■□□□ 1.88
APP-215ENST00000474136 PPP2R1AP30153 589 aa26.77■■□□□ 1.88
APP-215ENST00000474136 KIF6Q6ZMV9 814 aa26.77■■□□□ 1.88
APP-215ENST00000474136 RBM17Q96I25 401 aaKnown RBP26.77■■□□□ 1.88
APP-215ENST00000474136 CRAMP1Q96RY5 1269 aa26.77■■□□□ 1.88
APP-215ENST00000474136 RIC1Q4ADV7 1423 aa26.77■■□□□ 1.88
APP-215ENST00000474136 PPIP5K2O43314 1243 aa26.76■■□□□ 1.87
APP-215ENST00000474136 AOC3Q16853 763 aa26.75■■□□□ 1.87
APP-215ENST00000474136 GRIPAP1Q4V328 841 aa26.75■■□□□ 1.87
APP-215ENST00000474136 IBTKQ9P2D0 1353 aaPredicted RBP26.74■■□□□ 1.87
APP-215ENST00000474136 NTSR2O95665 410 aa26.74■■□□□ 1.87
APP-215ENST00000474136 GPRC5DQ9NZD1 345 aa26.74■■□□□ 1.87
APP-215ENST00000474136 LAMB4A4D0S4 1761 aa26.74■■□□□ 1.87
APP-215ENST00000474136 EIF4A1P60842 406 aaKnown RBP26.73■■□□□ 1.87
APP-215ENST00000474136 ZNF34Q8IZ26 560 aa26.73■■□□□ 1.87
APP-215ENST00000474136 ADARB2Q9NS39 739 aaKnown RBP26.73■■□□□ 1.87
APP-215ENST00000474136 NUP98P52948 1817 aa26.73■■□□□ 1.87
APP-215ENST00000474136 MLLT1Q03111 559 aaPredicted RBP26.72■■□□□ 1.87
APP-215ENST00000474136 CELF2O95319 508 aaKnown RBP26.71■■□□□ 1.87
APP-215ENST00000474136 CXCL9Q07325 125 aa26.71■■□□□ 1.87
APP-215ENST00000474136 SAPCD2Q86UD0 394 aa26.71■■□□□ 1.87
APP-215ENST00000474136 GLIS2Q9BZE0 524 aaPredicted RBP26.71■■□□□ 1.87
APP-215ENST00000474136 MAP2K2P36507 400 aa26.7■■□□□ 1.87
APP-215ENST00000474136 THUMPD2Q9BTF0 503 aaKnown RBP26.7■■□□□ 1.87
APP-215ENST00000474136 RGS19P49795 217 aa26.69■■□□□ 1.86
APP-215ENST00000474136 GMPSP49915 693 aaPredicted RBP26.69■■□□□ 1.86
APP-215ENST00000474136 GIGYF2Q6Y7W6 1299 aaKnown RBP26.69■■□□□ 1.86
APP-215ENST00000474136 PNISRQ8TF01 805 aaKnown RBP26.69■■□□□ 1.86
APP-215ENST00000474136 ATP6V0A2Q9Y487 856 aa26.69■■□□□ 1.86
APP-215ENST00000474136 TRPM7Q96QT4 1865 aa26.69■■□□□ 1.86
APP-215ENST00000474136 ZNRF3Q9ULT6 936 aa26.68■■□□□ 1.86
APP-215ENST00000474136 NLRP3Q96P20 1036 aa26.67■■□□□ 1.86
APP-215ENST00000474136 PPP1R42Q7Z4L9 355 aa26.66■■□□□ 1.86
APP-215ENST00000474136 MCOLN1Q9GZU1 580 aa26.66■■□□□ 1.86
APP-215ENST00000474136 KDM3BQ7LBC6 1761 aa26.66■■□□□ 1.86
APP-215ENST00000474136 ABCC4O15439 1325 aa26.66■■□□□ 1.86
APP-215ENST00000474136 TMX4Q9H1E5 349 aaPredicted RBP26.65■■□□□ 1.86
APP-215ENST00000474136 ZNF408Q9H9D4 720 aa26.65■■□□□ 1.86
APP-215ENST00000474136 HIRAP54198 1017 aaPredicted RBP26.65■■□□□ 1.86
APP-215ENST00000474136 CFAP44Q96MT7 982 aa26.65■■□□□ 1.86
APP-215ENST00000474136 RTFDC1Q9BY42 306 aaPredicted RBP26.65■■□□□ 1.86
APP-215ENST00000474136 VPS33BQ9H267 617 aa26.65■■□□□ 1.86
APP-215ENST00000474136 RAD17O75943 681 aa26.64■■□□□ 1.85
APP-215ENST00000474136 PARP10Q53GL7 1025 aa26.64■■□□□ 1.85
APP-215ENST00000474136 TRPM4Q8TD43 1214 aa26.64■■□□□ 1.85
APP-215ENST00000474136 PGAP2Q9UHJ9 254 aa26.64■■□□□ 1.85
APP-215ENST00000474136 SHTN1A0MZ66 631 aa26.63■■□□□ 1.85
APP-215ENST00000474136 SLC10A5Q5PT55 438 aa26.63■■□□□ 1.85
APP-215ENST00000474136 CIAPIN1Q6FI81 312 aa26.63■■□□□ 1.85
APP-215ENST00000474136 DPP8Q6V1X1 898 aaPredicted RBP26.63■■□□□ 1.85
APP-215ENST00000474136 LRP10Q7Z4F1 713 aa26.63■■□□□ 1.85
APP-215ENST00000474136 SUPT20HQ8NEM7 779 aa26.63■■□□□ 1.85
APP-215ENST00000474136 UTP14AQ9BVJ6 771 aaKnown RBP26.63■■□□□ 1.85
APP-215ENST00000474136 CA12O43570 354 aa26.62■■□□□ 1.85
APP-215ENST00000474136 BRPF1P55201 1214 aaPredicted RBP26.62■■□□□ 1.85
APP-215ENST00000474136 ZIC5Q96T25 663 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms