RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 MASTLQ96GX5 879 aa17.55■□□□□ 0.4
USF1-205ENST00000473969 ISCA1Q9BUE6 129 aa17.55■□□□□ 0.4
USF1-205ENST00000473969 METTL22Q9BUU2 404 aaPredicted RBP17.55■□□□□ 0.4
USF1-205ENST00000473969 SH3TC1Q8TE82 1336 aa17.54■□□□□ 0.4
USF1-205ENST00000473969 CT47B1P0C2W7 299 aaPredicted RBP17.54■□□□□ 0.4
USF1-205ENST00000473969 NPR1P16066 1061 aa17.54■□□□□ 0.4
USF1-205ENST00000473969 TRIM28Q13263 835 aaKnown RBP17.54■□□□□ 0.4
USF1-205ENST00000473969 STYK1Q6J9G0 422 aa17.54■□□□□ 0.4
USF1-205ENST00000473969 TRMT2AQ8IZ69 625 aaKnown RBP17.54■□□□□ 0.4
USF1-205ENST00000473969 CNKSR1Q969H4 720 aa17.54■□□□□ 0.4
USF1-205ENST00000473969 NLRP3Q96P20 1036 aa17.54■□□□□ 0.4
USF1-205ENST00000473969 SRGNP10124 158 aa17.53■□□□□ 0.4
USF1-205ENST00000473969 HSP90B1P14625 803 aaKnown RBP17.53■□□□□ 0.4
USF1-205ENST00000473969 CCDC191Q8NCU4 936 aa17.53■□□□□ 0.4
USF1-205ENST00000473969 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
USF1-205ENST00000473969 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
USF1-205ENST00000473969 ARHGAP27Q6ZUM4 889 aa17.52■□□□□ 0.4
USF1-205ENST00000473969 DNAAF4Q8WXU2 420 aa17.52■□□□□ 0.4
USF1-205ENST00000473969 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.4
USF1-205ENST00000473969 ALDH1B1P30837 517 aa17.51■□□□□ 0.39
USF1-205ENST00000473969 SLC10A5Q5PT55 438 aa17.51■□□□□ 0.39
USF1-205ENST00000473969 ZBED9Q6R2W3 1325 aa17.5■□□□□ 0.39
USF1-205ENST00000473969 KLRG2A4D1S0 409 aaPredicted RBP17.5■□□□□ 0.39
USF1-205ENST00000473969 ALDH1L2Q3SY69 923 aa17.5■□□□□ 0.39
USF1-205ENST00000473969 FAM89AQ96GI7 184 aa17.5■□□□□ 0.39
USF1-205ENST00000473969 RBM17Q96I25 401 aaKnown RBP17.5■□□□□ 0.39
USF1-205ENST00000473969 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
USF1-205ENST00000473969 ABCC12Q96J65 1359 aa17.5■□□□□ 0.39
USF1-205ENST00000473969 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
USF1-205ENST00000473969 YY1P25490 414 aa17.49■□□□□ 0.39
USF1-205ENST00000473969 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
USF1-205ENST00000473969 MRPL50Q8N5N7 158 aaKnown RBP17.49■□□□□ 0.39
USF1-205ENST00000473969 ZBTB38Q8NAP3 1195 aaPredicted RBP17.49■□□□□ 0.39
USF1-205ENST00000473969 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
USF1-205ENST00000473969 ADCY9O60503 1353 aa17.49■□□□□ 0.39
USF1-205ENST00000473969 SOGA3Q5TF21 947 aa17.48■□□□□ 0.39
USF1-205ENST00000473969 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
USF1-205ENST00000473969 TMX4Q9H1E5 349 aaPredicted RBP17.48■□□□□ 0.39
USF1-205ENST00000473969 RIC1Q4ADV7 1423 aa17.47■□□□□ 0.39
USF1-205ENST00000473969 KIAA1551Q9HCM1 1747 aa17.47■□□□□ 0.39
USF1-205ENST00000473969 IRS4O14654 1257 aaPredicted RBP17.47■□□□□ 0.39
USF1-205ENST00000473969 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
USF1-205ENST00000473969 CRY2Q49AN0 593 aa17.47■□□□□ 0.39
USF1-205ENST00000473969 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
USF1-205ENST00000473969 LINS1Q8NG48 757 aa17.47■□□□□ 0.39
USF1-205ENST00000473969 BCL2L13Q9BXK5 485 aa17.47■□□□□ 0.39
USF1-205ENST00000473969 ANKRD36CQ5JPF3 1778 aa17.47■□□□□ 0.39
USF1-205ENST00000473969 PTPRCP08575 1304 aa17.47■□□□□ 0.39
USF1-205ENST00000473969 ANKRD31Q8N7Z5 1873 aa17.46■□□□□ 0.39
USF1-205ENST00000473969 ARFGEF2Q9Y6D5 1785 aa17.46■□□□□ 0.39
USF1-205ENST00000473969 NEURL1BA8MQ27 555 aa17.46■□□□□ 0.39
USF1-205ENST00000473969 F6X3S4 739 aa17.46■□□□□ 0.39
USF1-205ENST00000473969 C21orf2O43822 256 aa17.46■□□□□ 0.39
USF1-205ENST00000473969 IGKV5-2P06315 115 aa17.46■□□□□ 0.39
USF1-205ENST00000473969 SLC4A10Q6U841 1118 aa17.46■□□□□ 0.39
USF1-205ENST00000473969 DDX46Q7L014 1031 aaKnown RBP17.46■□□□□ 0.39
USF1-205ENST00000473969 SYNE4Q8N205 404 aa17.46■□□□□ 0.39
USF1-205ENST00000473969 CACNA1FO60840 1977 aa17.46■□□□□ 0.39
USF1-205ENST00000473969 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
USF1-205ENST00000473969 CRAMP1Q96RY5 1269 aa17.45■□□□□ 0.38
USF1-205ENST00000473969 HOXA10P31260 410 aaPredicted RBP17.44■□□□□ 0.38
USF1-205ENST00000473969 PDE8AO60658 829 aa17.43■□□□□ 0.38
USF1-205ENST00000473969 GCKRQ14397 625 aa17.43■□□□□ 0.38
USF1-205ENST00000473969 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
USF1-205ENST00000473969 C3orf67Q6ZVT6 689 aa17.43■□□□□ 0.38
USF1-205ENST00000473969 JARID2Q92833 1246 aaPredicted RBP17.43■□□□□ 0.38
USF1-205ENST00000473969 SRCIN1Q9C0H9 1055 aa17.43■□□□□ 0.38
USF1-205ENST00000473969 RARSP54136 660 aaKnown RBP17.42■□□□□ 0.38
USF1-205ENST00000473969 BEND3Q5T5X7 828 aa17.42■□□□□ 0.38
USF1-205ENST00000473969 CDHR2Q9BYE9 1310 aa17.42■□□□□ 0.38
USF1-205ENST00000473969 DLEC1Q9Y238 1755 aa17.41■□□□□ 0.38
USF1-205ENST00000473969 SF3B3Q15393 1217 aaKnown RBP17.41■□□□□ 0.38
USF1-205ENST00000473969 CCDC152Q4G0S7 254 aa17.41■□□□□ 0.38
USF1-205ENST00000473969 CC2D2BQ6DHV5 1058 aa17.41■□□□□ 0.38
USF1-205ENST00000473969 UBE3BQ7Z3V4 1068 aa17.41■□□□□ 0.38
USF1-205ENST00000473969 RTKN2Q8IZC4 609 aa17.41■□□□□ 0.38
USF1-205ENST00000473969 C9orf78Q9NZ63 289 aaPredicted RBP17.41■□□□□ 0.38
USF1-205ENST00000473969 NOB1Q9ULX3 412 aaKnown RBP17.41■□□□□ 0.38
USF1-205ENST00000473969 BRCA1P38398 1863 aaKnown RBP17.41■□□□□ 0.38
USF1-205ENST00000473969 COL11A2P13942 1736 aaPredicted RBP17.41■□□□□ 0.38
USF1-205ENST00000473969 H7C1W4 665 aa17.4■□□□□ 0.38
USF1-205ENST00000473969 PPEF1O14829 653 aaPredicted RBP17.4■□□□□ 0.38
USF1-205ENST00000473969 IPO8O15397 1037 aaKnown RBP17.4■□□□□ 0.38
USF1-205ENST00000473969 ALDH1L1O75891 902 aa17.4■□□□□ 0.38
USF1-205ENST00000473969 BBOX1O75936 387 aa17.4■□□□□ 0.38
USF1-205ENST00000473969 GRAPQ13588 217 aa17.4■□□□□ 0.38
USF1-205ENST00000473969 GRAPLQ8TC17 118 aaPredicted RBP17.4■□□□□ 0.38
USF1-205ENST00000473969 API5Q9BZZ5 524 aaKnown RBP17.4■□□□□ 0.38
USF1-205ENST00000473969 KIF16BQ96L93 1317 aa17.4■□□□□ 0.38
USF1-205ENST00000473969 BRPF1P55201 1214 aaPredicted RBP17.39■□□□□ 0.37
USF1-205ENST00000473969 GRIPAP1Q4V328 841 aa17.39■□□□□ 0.37
USF1-205ENST00000473969 TAOK3Q9H2K8 898 aa17.39■□□□□ 0.37
USF1-205ENST00000473969 ARFGEF1Q9Y6D6 1849 aa17.39■□□□□ 0.37
USF1-205ENST00000473969 ABCC4O15439 1325 aa17.39■□□□□ 0.37
USF1-205ENST00000473969 TNRC6CQ9HCJ0 1690 aaKnown RBP17.39■□□□□ 0.37
USF1-205ENST00000473969 LMNB1P20700 586 aa17.38■□□□□ 0.37
USF1-205ENST00000473969 RASSF7Q02833 373 aa17.38■□□□□ 0.37
USF1-205ENST00000473969 C9orf131Q5VYM1 1079 aa17.38■□□□□ 0.37
USF1-205ENST00000473969 TMC4Q7Z404 712 aa17.38■□□□□ 0.37
USF1-205ENST00000473969 C7orf43Q8WVR3 580 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms