RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 MAP3K15Q6ZN16 1313 aa18.39■□□□□ 0.53
LMNA-213ENST00000473598 GRM8O00222 908 aa18.39■□□□□ 0.53
LMNA-213ENST00000473598 GCKRQ14397 625 aa18.39■□□□□ 0.53
LMNA-213ENST00000473598 NPM2Q86SE8 214 aaKnown RBP18.39■□□□□ 0.53
LMNA-213ENST00000473598 TUBGCP6Q96RT7 1819 aa18.38■□□□□ 0.53
LMNA-213ENST00000473598 CNTNAP4Q9C0A0 1308 aa18.38■□□□□ 0.53
LMNA-213ENST00000473598 ATP5J2-PTCD1G3V325 749 aa18.37■□□□□ 0.53
LMNA-213ENST00000473598 DZIP3Q86Y13 1208 aaKnown RBP18.37■□□□□ 0.53
LMNA-213ENST00000473598 ARXQ96QS3 562 aa18.37■□□□□ 0.53
LMNA-213ENST00000473598 TFCP2L1Q9NZI6 479 aa18.37■□□□□ 0.53
LMNA-213ENST00000473598 HDAC5Q9UQL6 1122 aa18.37■□□□□ 0.53
LMNA-213ENST00000473598 ATP8B2P98198 1209 aa18.36■□□□□ 0.53
LMNA-213ENST00000473598 GCC1Q96CN9 775 aa18.36■□□□□ 0.53
LMNA-213ENST00000473598 AK7Q96M32 723 aa18.36■□□□□ 0.53
LMNA-213ENST00000473598 ERVV-1B6SEH8 477 aa18.35■□□□□ 0.53
LMNA-213ENST00000473598 GNPATO15228 680 aa18.35■□□□□ 0.53
LMNA-213ENST00000473598 HMMRO75330 724 aa18.35■□□□□ 0.53
LMNA-213ENST00000473598 TCIRG1Q13488 830 aa18.35■□□□□ 0.53
LMNA-213ENST00000473598 RC3H1Q5TC82 1133 aaKnown RBP18.35■□□□□ 0.53
LMNA-213ENST00000473598 GIGYF2Q6Y7W6 1299 aaKnown RBP18.35■□□□□ 0.53
LMNA-213ENST00000473598 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
LMNA-213ENST00000473598 RRP9O43818 475 aaKnown RBP18.35■□□□□ 0.53
LMNA-213ENST00000473598 PHF14O94880 888 aa18.35■□□□□ 0.53
LMNA-213ENST00000473598 ISCA1Q9BUE6 129 aa18.35■□□□□ 0.53
LMNA-213ENST00000473598 TBC1D2BQ9UPU7 963 aa18.35■□□□□ 0.53
LMNA-213ENST00000473598 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
LMNA-213ENST00000473598 CCDC191Q8NCU4 936 aa18.34■□□□□ 0.53
LMNA-213ENST00000473598 DCTPP1Q9H773 170 aa18.34■□□□□ 0.53
LMNA-213ENST00000473598 PDZRN3Q9UPQ7 1066 aa18.34■□□□□ 0.53
LMNA-213ENST00000473598 COL15A1P39059 1388 aa18.34■□□□□ 0.53
LMNA-213ENST00000473598 UBR3Q6ZT12 1888 aa18.34■□□□□ 0.53
LMNA-213ENST00000473598 HLFQ16534 295 aa18.33■□□□□ 0.53
LMNA-213ENST00000473598 CWC25Q9NXE8 425 aaPredicted RBP18.33■□□□□ 0.53
LMNA-213ENST00000473598 PNMA6EA0A0J9YXQ4 647 aa18.33■□□□□ 0.52
LMNA-213ENST00000473598 TRIM28Q13263 835 aaKnown RBP18.33■□□□□ 0.52
LMNA-213ENST00000473598 HSP90AB3PQ58FF7 597 aa18.33■□□□□ 0.52
LMNA-213ENST00000473598 A0A087WZG4 1122 aa18.32■□□□□ 0.52
LMNA-213ENST00000473598 SUCLG2Q96I99 432 aa18.32■□□□□ 0.52
LMNA-213ENST00000473598 KAZALD1Q96I82 304 aa18.32■□□□□ 0.52
LMNA-213ENST00000473598 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.31■□□□□ 0.52
LMNA-213ENST00000473598 RPS6KA4O75676 772 aa18.31■□□□□ 0.52
LMNA-213ENST00000473598 NUCB1Q02818 461 aa18.31■□□□□ 0.52
LMNA-213ENST00000473598 MTX1Q13505 466 aa18.31■□□□□ 0.52
LMNA-213ENST00000473598 PPP1R42Q7Z4L9 355 aa18.31■□□□□ 0.52
LMNA-213ENST00000473598 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
LMNA-213ENST00000473598 SSH3Q8TE77 659 aa18.31■□□□□ 0.52
LMNA-213ENST00000473598 H7C1W4 665 aa18.3■□□□□ 0.52
LMNA-213ENST00000473598 CASP7P55210 303 aa18.3■□□□□ 0.52
LMNA-213ENST00000473598 UBE3BQ7Z3V4 1068 aa18.3■□□□□ 0.52
LMNA-213ENST00000473598 DDRGK1Q96HY6 314 aa18.3■□□□□ 0.52
LMNA-213ENST00000473598 CAMTA2O94983 1202 aa18.3■□□□□ 0.52
LMNA-213ENST00000473598 POLA2Q14181 598 aa18.3■□□□□ 0.52
LMNA-213ENST00000473598 RTCBQ9Y3I0 505 aaKnown RBP18.3■□□□□ 0.52
LMNA-213ENST00000473598 SCN7AQ01118 1682 aa18.29■□□□□ 0.52
LMNA-213ENST00000473598 BICC1Q9H694 974 aaKnown RBP18.29■□□□□ 0.52
LMNA-213ENST00000473598 CASZ1Q86V15 1759 aa18.29■□□□□ 0.52
LMNA-213ENST00000473598 SRGAP3O43295 1099 aa18.28■□□□□ 0.52
LMNA-213ENST00000473598 RGS3P49796 1198 aa18.28■□□□□ 0.52
LMNA-213ENST00000473598 JARID2Q92833 1246 aaPredicted RBP18.28■□□□□ 0.52
LMNA-213ENST00000473598 C4AP0C0L4 1744 aa18.28■□□□□ 0.52
LMNA-213ENST00000473598 QSER1Q2KHR3 1735 aa18.28■□□□□ 0.52
LMNA-213ENST00000473598 SSFA2P28290 1259 aa18.28■□□□□ 0.52
LMNA-213ENST00000473598 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
LMNA-213ENST00000473598 NLRP10Q86W26 655 aa18.28■□□□□ 0.52
LMNA-213ENST00000473598 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
LMNA-213ENST00000473598 ZNF34Q8IZ26 560 aa18.28■□□□□ 0.52
LMNA-213ENST00000473598 ARHGEF1Q92888 912 aaKnown RBP18.27■□□□□ 0.52
LMNA-213ENST00000473598 ZBTB7AO95365 584 aa18.27■□□□□ 0.51
LMNA-213ENST00000473598 GPTP24298 496 aa18.27■□□□□ 0.51
LMNA-213ENST00000473598 EPHA10Q5JZY3 1008 aa18.27■□□□□ 0.51
LMNA-213ENST00000473598 PCCAP05165 728 aaPredicted RBP18.26■□□□□ 0.51
LMNA-213ENST00000473598 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
LMNA-213ENST00000473598 FAM161AQ3B820 660 aa18.26■□□□□ 0.51
LMNA-213ENST00000473598 TRAPPC3LQ5T215 181 aa18.26■□□□□ 0.51
LMNA-213ENST00000473598 MYH3P11055 1940 aa18.25■□□□□ 0.51
LMNA-213ENST00000473598 RGL2O15211 777 aa18.25■□□□□ 0.51
LMNA-213ENST00000473598 HSP90AA2PQ14568 343 aaPredicted RBP18.25■□□□□ 0.51
LMNA-213ENST00000473598 CLEC4GQ6UXB4 293 aa18.25■□□□□ 0.51
LMNA-213ENST00000473598 ZBTB38Q8NAP3 1195 aaPredicted RBP18.25■□□□□ 0.51
LMNA-213ENST00000473598 LNPKQ9C0E8 428 aa18.25■□□□□ 0.51
LMNA-213ENST00000473598 ZNF652Q9Y2D9 606 aa18.25■□□□□ 0.51
LMNA-213ENST00000473598 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
LMNA-213ENST00000473598 NFKBIBQ15653 356 aa18.25■□□□□ 0.51
LMNA-213ENST00000473598 RABL6Q3YEC7 729 aaPredicted RBP18.25■□□□□ 0.51
LMNA-213ENST00000473598 C8orf34Q49A92 452 aa18.25■□□□□ 0.51
LMNA-213ENST00000473598 SRP68Q9UHB9 627 aaKnown RBP18.25■□□□□ 0.51
LMNA-213ENST00000473598 EXOC6BQ9Y2D4 811 aa18.25■□□□□ 0.51
LMNA-213ENST00000473598 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
LMNA-213ENST00000473598 FOXO4P98177 505 aa18.23■□□□□ 0.51
LMNA-213ENST00000473598 MSL1Q68DK7 614 aa18.23■□□□□ 0.51
LMNA-213ENST00000473598 FLAD1Q8NFF5 587 aa18.23■□□□□ 0.51
LMNA-213ENST00000473598 FAM89AQ96GI7 184 aa18.23■□□□□ 0.51
LMNA-213ENST00000473598 ATF5Q9Y2D1 282 aaPredicted RBP18.23■□□□□ 0.51
LMNA-213ENST00000473598 CDHR2Q9BYE9 1310 aa18.22■□□□□ 0.51
LMNA-213ENST00000473598 SURF6O75683 361 aaKnown RBP18.22■□□□□ 0.51
LMNA-213ENST00000473598 RFC4P35249 363 aa18.22■□□□□ 0.51
LMNA-213ENST00000473598 PARP10Q53GL7 1025 aa18.22■□□□□ 0.51
LMNA-213ENST00000473598 APBB1O00213 710 aa18.22■□□□□ 0.51
LMNA-213ENST00000473598 ADRA2BP18089 450 aa18.22■□□□□ 0.51
LMNA-213ENST00000473598 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms