RNA–Protein interactions for RNA: ENST00000473517.1

SATB2-208, Transcript of SATB homeobox 2, humanhuman

TSL 3

Gene SATB2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-208ENST00000473517 GBA2Q9HCG7 927 aaPredicted RBP11.34□□□□□ -0.59
SATB2-208ENST00000473517 POLKQ9UBT6 870 aa11.34□□□□□ -0.59
SATB2-208ENST00000473517 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.6
SATB2-208ENST00000473517 SLC10A3P09131 477 aa11.33□□□□□ -0.6
SATB2-208ENST00000473517 HIRAP54198 1017 aaPredicted RBP11.33□□□□□ -0.6
SATB2-208ENST00000473517 SLC39A6Q13433 755 aa11.33□□□□□ -0.6
SATB2-208ENST00000473517 USP48Q86UV5 1035 aa11.33□□□□□ -0.6
SATB2-208ENST00000473517 NBPF5PQ86XG9 351 aaPredicted RBP11.33□□□□□ -0.6
SATB2-208ENST00000473517 NIM1KQ8IY84 436 aa11.33□□□□□ -0.6
SATB2-208ENST00000473517 SNED1Q8TER0 1413 aa11.33□□□□□ -0.6
SATB2-208ENST00000473517 TRIOBPQ9H2D6 2365 aa11.33□□□□□ -0.6
SATB2-208ENST00000473517 BCORQ6W2J9 1755 aa11.32□□□□□ -0.6
SATB2-208ENST00000473517 POTEFA5A3E0 1075 aa11.32□□□□□ -0.6
SATB2-208ENST00000473517 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
SATB2-208ENST00000473517 IL6STP40189 918 aaPredicted RBP11.32□□□□□ -0.6
SATB2-208ENST00000473517 OTUD5Q96G74 571 aa11.32□□□□□ -0.6
SATB2-208ENST00000473517 COL4A5P29400 1685 aa11.32□□□□□ -0.6
SATB2-208ENST00000473517 CDHR2Q9BYE9 1310 aa11.32□□□□□ -0.6
SATB2-208ENST00000473517 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
SATB2-208ENST00000473517 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
SATB2-208ENST00000473517 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
SATB2-208ENST00000473517 GPR25O00155 361 aa11.3□□□□□ -0.6
SATB2-208ENST00000473517 GMPSP49915 693 aaPredicted RBP11.3□□□□□ -0.6
SATB2-208ENST00000473517 CXCL9Q07325 125 aa11.3□□□□□ -0.6
SATB2-208ENST00000473517 CLEC4GQ6UXB4 293 aa11.3□□□□□ -0.6
SATB2-208ENST00000473517 TEX13AQ9BXU3 409 aaPredicted RBP11.3□□□□□ -0.6
SATB2-208ENST00000473517 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
SATB2-208ENST00000473517 ZNF330Q9Y3S2 320 aaPredicted RBP11.3□□□□□ -0.6
SATB2-208ENST00000473517 NPC1L1Q9UHC9 1359 aa11.29□□□□□ -0.6
SATB2-208ENST00000473517 ANKRD26Q9UPS8 1709 aa11.29□□□□□ -0.6
SATB2-208ENST00000473517 COL6A3P12111 3177 aa11.29□□□□□ -0.6
SATB2-208ENST00000473517 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
SATB2-208ENST00000473517 TBC1D8O95759 1140 aa11.28□□□□□ -0.6
SATB2-208ENST00000473517 DLK2Q6UY11 383 aa11.28□□□□□ -0.6
SATB2-208ENST00000473517 KRT26Q7Z3Y9 468 aa11.28□□□□□ -0.6
SATB2-208ENST00000473517 TRPM4Q8TD43 1214 aa11.28□□□□□ -0.6
SATB2-208ENST00000473517 BCL2L13Q9BXK5 485 aa11.28□□□□□ -0.6
SATB2-208ENST00000473517 ZNRF3Q9ULT6 936 aa11.28□□□□□ -0.6
SATB2-208ENST00000473517 AKAP11Q9UKA4 1901 aa11.28□□□□□ -0.6
SATB2-208ENST00000473517 RNMTO43148 476 aaKnown RBP11.27□□□□□ -0.61
SATB2-208ENST00000473517 PPIP5K2O43314 1243 aa11.27□□□□□ -0.61
SATB2-208ENST00000473517 FKTNO75072 461 aa11.27□□□□□ -0.61
SATB2-208ENST00000473517 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.61
SATB2-208ENST00000473517 CARD14Q9BXL6 1004 aa11.27□□□□□ -0.61
SATB2-208ENST00000473517 CNOT7Q9UIV1 285 aaKnown RBP11.27□□□□□ -0.61
SATB2-208ENST00000473517 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
SATB2-208ENST00000473517 SCN11AQ9UI33 1791 aa11.26□□□□□ -0.61
SATB2-208ENST00000473517 H0YGN5 161 aa11.26□□□□□ -0.61
SATB2-208ENST00000473517 H7C1D1 291 aa11.26□□□□□ -0.61
SATB2-208ENST00000473517 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
SATB2-208ENST00000473517 TNIP1Q15025 636 aa11.26□□□□□ -0.61
SATB2-208ENST00000473517 CRY2Q49AN0 593 aa11.26□□□□□ -0.61
SATB2-208ENST00000473517 DZIP3Q86Y13 1208 aaKnown RBP11.26□□□□□ -0.61
SATB2-208ENST00000473517 RASAL3Q86YV0 1011 aa11.26□□□□□ -0.61
SATB2-208ENST00000473517 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
SATB2-208ENST00000473517 TTC5Q8N0Z6 440 aa11.26□□□□□ -0.61
SATB2-208ENST00000473517 CHRDL2Q6WN34 429 aa11.25□□□□□ -0.61
SATB2-208ENST00000473517 ZNF652Q9Y2D9 606 aa11.25□□□□□ -0.61
SATB2-208ENST00000473517 KIAA0100Q14667 2235 aaKnown RBP11.24□□□□□ -0.61
SATB2-208ENST00000473517 KIF20BQ96Q89 1820 aa11.24□□□□□ -0.61
SATB2-208ENST00000473517 RGL2O15211 777 aa11.24□□□□□ -0.61
SATB2-208ENST00000473517 HOXA10P31260 410 aaPredicted RBP11.24□□□□□ -0.61
SATB2-208ENST00000473517 TM4SF4P48230 202 aa11.24□□□□□ -0.61
SATB2-208ENST00000473517 AOC3Q16853 763 aa11.24□□□□□ -0.61
SATB2-208ENST00000473517 DCPSQ96C86 337 aaKnown RBP11.24□□□□□ -0.61
SATB2-208ENST00000473517 CFHR5Q9BXR6 569 aa11.24□□□□□ -0.61
SATB2-208ENST00000473517 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
SATB2-208ENST00000473517 BRCA2P51587 3418 aa11.24□□□□□ -0.61
SATB2-208ENST00000473517 MRC1P22897 1456 aa11.24□□□□□ -0.61
SATB2-208ENST00000473517 RANBP2P49792 3224 aaKnown RBP11.24□□□□□ -0.61
SATB2-208ENST00000473517 CEP290O15078 2479 aa11.23□□□□□ -0.61
SATB2-208ENST00000473517 A1BGP04217 495 aa11.23□□□□□ -0.61
SATB2-208ENST00000473517 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
SATB2-208ENST00000473517 NEUROD1Q13562 356 aa11.23□□□□□ -0.61
SATB2-208ENST00000473517 DPF2Q92785 391 aa11.23□□□□□ -0.61
SATB2-208ENST00000473517 ADM5C9JUS6 153 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 FKBP1BP68106 108 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 KIF7Q2M1P5 1343 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 CDCA8Q53HL2 280 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 SULT6B1Q6IMI4 303 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 SUPT20HQ8NEM7 779 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 ARMC5Q96C12 935 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 ZNF496Q96IT1 587 aaPredicted RBP11.22□□□□□ -0.61
SATB2-208ENST00000473517 TMEM106CQ9BVX2 250 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 TMX4Q9H1E5 349 aaPredicted RBP11.22□□□□□ -0.61
SATB2-208ENST00000473517 HEG1Q9ULI3 1381 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 NIP7Q9Y221 180 aaKnown RBP eCLIP11.22□□□□□ -0.61
SATB2-208ENST00000473517 TRIM17Q9Y577 477 aa11.22□□□□□ -0.61
SATB2-208ENST00000473517 SHTN1A0MZ66 631 aa11.21□□□□□ -0.61
SATB2-208ENST00000473517 RAD17O75943 681 aa11.21□□□□□ -0.61
SATB2-208ENST00000473517 TNNT2P45379 298 aaPredicted RBP11.21□□□□□ -0.61
SATB2-208ENST00000473517 SAMD7Q7Z3H4 446 aa11.21□□□□□ -0.61
SATB2-208ENST00000473517 RPGRQ92834 1020 aaKnown RBP11.21□□□□□ -0.61
SATB2-208ENST00000473517 CRAMP1Q96RY5 1269 aa11.21□□□□□ -0.61
SATB2-208ENST00000473517 COL25A1Q9BXS0 654 aaPredicted RBP11.21□□□□□ -0.61
SATB2-208ENST00000473517 RTFDC1Q9BY42 306 aaPredicted RBP11.21□□□□□ -0.61
SATB2-208ENST00000473517 HTTP42858 3142 aa11.21□□□□□ -0.62
SATB2-208ENST00000473517 FAM177BA6PVY3 158 aa11.2□□□□□ -0.62
SATB2-208ENST00000473517 PPEF1O14829 653 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms