RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 WHAMMQ8TF30 809 aa8.52□□□□□ -1.05
CNOT4-209ENST00000473470 STRN4Q9NRL3 753 aa8.52□□□□□ -1.05
CNOT4-209ENST00000473470 SLAIN2Q9P270 581 aa8.52□□□□□ -1.05
CNOT4-209ENST00000473470 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
CNOT4-209ENST00000473470 SIN3BO75182 1162 aa8.51□□□□□ -1.05
CNOT4-209ENST00000473470 ARHGEF15O94989 841 aa8.51□□□□□ -1.05
CNOT4-209ENST00000473470 PODNQ7Z5L7 613 aa8.51□□□□□ -1.05
CNOT4-209ENST00000473470 RETREG2Q8NC44 543 aa8.51□□□□□ -1.05
CNOT4-209ENST00000473470 NEDD1Q8NHV4 660 aa8.51□□□□□ -1.05
CNOT4-209ENST00000473470 HELQQ8TDG4 1101 aa8.51□□□□□ -1.05
CNOT4-209ENST00000473470 IFT43Q96FT9 208 aa8.51□□□□□ -1.05
CNOT4-209ENST00000473470 DMGDHQ9UI17 866 aaKnown RBP8.51□□□□□ -1.05
CNOT4-209ENST00000473470 LRFN2Q9ULH4 789 aa8.51□□□□□ -1.05
CNOT4-209ENST00000473470 NEURL1BA8MQ27 555 aa8.5□□□□□ -1.05
CNOT4-209ENST00000473470 PIK3R2O00459 728 aa8.5□□□□□ -1.05
CNOT4-209ENST00000473470 MICAL2O94851 1124 aa8.5□□□□□ -1.05
CNOT4-209ENST00000473470 EPXP11678 715 aa8.5□□□□□ -1.05
CNOT4-209ENST00000473470 INPP5BP32019 993 aa8.5□□□□□ -1.05
CNOT4-209ENST00000473470 SFSWAPQ12872 951 aaKnown RBP8.5□□□□□ -1.05
CNOT4-209ENST00000473470 TREML1Q86YW5 311 aa8.5□□□□□ -1.05
CNOT4-209ENST00000473470 PNMA5Q96PV4 448 aa8.5□□□□□ -1.05
CNOT4-209ENST00000473470 MARSP56192 900 aaKnown RBP8.49□□□□□ -1.05
CNOT4-209ENST00000473470 SYT9Q86SS6 491 aa8.49□□□□□ -1.05
CNOT4-209ENST00000473470 EDARADDQ8WWZ3 215 aa8.49□□□□□ -1.05
CNOT4-209ENST00000473470 SCARF2Q96GP6 870 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-209ENST00000473470 HCN2Q9UL51 889 aa8.49□□□□□ -1.05
CNOT4-209ENST00000473470 TNFRSF10BO14763 440 aa8.48□□□□□ -1.05
CNOT4-209ENST00000473470 AMPD1P23109 780 aa8.48□□□□□ -1.05
CNOT4-209ENST00000473470 KANK3Q6NY19 840 aa8.48□□□□□ -1.05
CNOT4-209ENST00000473470 GALNT6Q8NCL4 622 aa8.48□□□□□ -1.05
CNOT4-209ENST00000473470 TNFRSF25Q93038 417 aa8.48□□□□□ -1.05
CNOT4-209ENST00000473470 STIM2Q9P246 746 aa8.48□□□□□ -1.05
CNOT4-209ENST00000473470 DNMT3AQ9Y6K1 912 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-209ENST00000473470 PHF20L1A8MW92 1017 aa8.47□□□□□ -1.05
CNOT4-209ENST00000473470 ARID4AP29374 1257 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-209ENST00000473470 PCBP4P57723 403 aaKnown RBP8.47□□□□□ -1.05
CNOT4-209ENST00000473470 CCINQ13939 588 aa8.47□□□□□ -1.05
CNOT4-209ENST00000473470 FCHSD1Q86WN1 690 aa8.47□□□□□ -1.05
CNOT4-209ENST00000473470 SLC30A3Q99726 388 aa8.47□□□□□ -1.05
CNOT4-209ENST00000473470 SAP130Q9H0E3 1048 aa8.47□□□□□ -1.05
CNOT4-209ENST00000473470 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
CNOT4-209ENST00000473470 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-209ENST00000473470 ELOA3DA6NLF2 546 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-209ENST00000473470 ADARB2-AS1A8MUL3 147 aa8.46□□□□□ -1.06
CNOT4-209ENST00000473470 ALAS2P22557 587 aa8.46□□□□□ -1.06
CNOT4-209ENST00000473470 NAA30Q147X3 362 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-209ENST00000473470 ELOA3BQ3SY89 546 aa8.46□□□□□ -1.06
CNOT4-209ENST00000473470 ETFBKMTQ8IXQ9 262 aa8.46□□□□□ -1.06
CNOT4-209ENST00000473470 ELOA3Q8NG57 546 aa8.46□□□□□ -1.06
CNOT4-209ENST00000473470 BHMTQ93088 406 aa8.46□□□□□ -1.06
CNOT4-209ENST00000473470 SF3B2Q13435 895 aaKnown RBP8.45□□□□□ -1.06
CNOT4-209ENST00000473470 PCSK7Q16549 785 aa8.45□□□□□ -1.06
CNOT4-209ENST00000473470 SEPT3Q9UH03 358 aa8.45□□□□□ -1.06
CNOT4-209ENST00000473470 EGFL7Q9UHF1 273 aa8.45□□□□□ -1.06
CNOT4-209ENST00000473470 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
CNOT4-209ENST00000473470 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-209ENST00000473470 SHISA8B8ZZ34 492 aa8.44□□□□□ -1.06
CNOT4-209ENST00000473470 EGFRP00533 1210 aa8.44□□□□□ -1.06
CNOT4-209ENST00000473470 RPLP1P05386 114 aaKnown RBP8.44□□□□□ -1.06
CNOT4-209ENST00000473470 ADH7P40394 386 aa8.44□□□□□ -1.06
CNOT4-209ENST00000473470 ZAP70P43403 619 aa8.44□□□□□ -1.06
CNOT4-209ENST00000473470 ALKBH2Q6NS38 261 aa8.44□□□□□ -1.06
CNOT4-209ENST00000473470 CAPN12Q6ZSI9 719 aa8.44□□□□□ -1.06
CNOT4-209ENST00000473470 RAB44Q7Z6P3 723 aaPredicted RBP8.44□□□□□ -1.06
CNOT4-209ENST00000473470 RGL4Q8IZJ4 473 aa8.44□□□□□ -1.06
CNOT4-209ENST00000473470 PIK3R5Q8WYR1 880 aa8.44□□□□□ -1.06
CNOT4-209ENST00000473470 MKL2Q9ULH7 1088 aa8.44□□□□□ -1.06
CNOT4-209ENST00000473470 MAP3K6O95382 1288 aa8.43□□□□□ -1.06
CNOT4-209ENST00000473470 PCSK2P16519 638 aa8.43□□□□□ -1.06
CNOT4-209ENST00000473470 NFKB1P19838 968 aa8.43□□□□□ -1.06
CNOT4-209ENST00000473470 CHSY3Q70JA7 882 aa8.43□□□□□ -1.06
CNOT4-209ENST00000473470 MDFIQ99750 246 aa8.43□□□□□ -1.06
CNOT4-209ENST00000473470 GSX2Q9BZM3 304 aa8.43□□□□□ -1.06
CNOT4-209ENST00000473470 UBE2OQ9C0C9 1292 aaKnown RBP8.43□□□□□ -1.06
CNOT4-209ENST00000473470 FNDC3AQ9Y2H6 1198 aaKnown RBP8.43□□□□□ -1.06
CNOT4-209ENST00000473470 XYLBO75191 536 aa8.42□□□□□ -1.06
CNOT4-209ENST00000473470 RARAP10276 462 aa8.42□□□□□ -1.06
CNOT4-209ENST00000473470 GRIN2CQ14957 1233 aa8.42□□□□□ -1.06
CNOT4-209ENST00000473470 C1orf229Q6ZS94 237 aaPredicted RBP8.42□□□□□ -1.06
CNOT4-209ENST00000473470 GTF3C2Q8WUA4 911 aaPredicted RBP8.42□□□□□ -1.06
CNOT4-209ENST00000473470 RRAGCQ9HB90 399 aa8.42□□□□□ -1.06
CNOT4-209ENST00000473470 KLF15Q9UIH9 416 aa8.42□□□□□ -1.06
CNOT4-209ENST00000473470 GRNP28799 593 aaKnown RBP8.41□□□□□ -1.06
CNOT4-209ENST00000473470 DGKGP49619 791 aa8.41□□□□□ -1.06
CNOT4-209ENST00000473470 PHLDB3Q6NSJ2 640 aa8.41□□□□□ -1.06
CNOT4-209ENST00000473470 BEND7Q8N7W2 519 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-209ENST00000473470 OPLAHO14841 1288 aa8.4□□□□□ -1.06
CNOT4-209ENST00000473470 FAM13AO94988 1023 aa8.4□□□□□ -1.06
CNOT4-209ENST00000473470 NOM1Q5C9Z4 860 aaKnown RBP8.4□□□□□ -1.06
CNOT4-209ENST00000473470 ALYREFQ86V81 257 aaKnown RBP8.4□□□□□ -1.06
CNOT4-209ENST00000473470 CMTR1Q8N1G2 835 aaKnown RBP8.4□□□□□ -1.06
CNOT4-209ENST00000473470 NOP53Q9NZM5 478 aaKnown RBP8.4□□□□□ -1.06
CNOT4-209ENST00000473470 CARNS1A5YM72 827 aa8.39□□□□□ -1.07
CNOT4-209ENST00000473470 GNB5O14775 395 aa8.39□□□□□ -1.07
CNOT4-209ENST00000473470 MPSTP25325 297 aa8.39□□□□□ -1.07
CNOT4-209ENST00000473470 SOX18P35713 384 aa8.39□□□□□ -1.07
CNOT4-209ENST00000473470 GPLD1P80108 840 aa8.39□□□□□ -1.07
CNOT4-209ENST00000473470 TBC1D8BQ0IIM8 1120 aa8.39□□□□□ -1.07
CNOT4-209ENST00000473470 BTBD6Q96KE9 485 aa8.39□□□□□ -1.07
CNOT4-209ENST00000473470 SLC6A14Q9UN76 642 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms