RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 MYRIPQ8NFW9 859 aa24.41■■□□□ 1.5
FSCN1-205ENST00000473330 KAZALD1Q96I82 304 aa24.41■■□□□ 1.5
FSCN1-205ENST00000473330 CHD2O14647 1828 aaKnown RBP24.4■■□□□ 1.5
FSCN1-205ENST00000473330 EAF2Q96CJ1 260 aaPredicted RBP24.4■■□□□ 1.5
FSCN1-205ENST00000473330 HEG1Q9ULI3 1381 aa24.39■■□□□ 1.5
FSCN1-205ENST00000473330 PRAMEF22A3QJZ6 481 aa24.39■■□□□ 1.5
FSCN1-205ENST00000473330 SUCLG2Q96I99 432 aa24.39■■□□□ 1.5
FSCN1-205ENST00000473330 HDAC5Q9UQL6 1122 aa24.39■■□□□ 1.5
FSCN1-205ENST00000473330 SLC27A2O14975 620 aa24.39■■□□□ 1.49
FSCN1-205ENST00000473330 LARP1BQ659C4 914 aaKnown RBP24.39■■□□□ 1.49
FSCN1-205ENST00000473330 SNRKQ9NRH2 765 aa24.39■■□□□ 1.49
FSCN1-205ENST00000473330 SPTLC3Q9NUV7 552 aa24.39■■□□□ 1.49
FSCN1-205ENST00000473330 PXDNQ92626 1479 aa24.39■■□□□ 1.49
FSCN1-205ENST00000473330 ADGRL3Q9HAR2 1447 aa24.38■■□□□ 1.49
FSCN1-205ENST00000473330 KCNJ4P48050 445 aa24.38■■□□□ 1.49
FSCN1-205ENST00000473330 MTERF4Q7Z6M4 381 aaKnown RBP24.38■■□□□ 1.49
FSCN1-205ENST00000473330 CCDC8Q9H0W5 538 aaPredicted RBP24.38■■□□□ 1.49
FSCN1-205ENST00000473330 HIP1O00291 1037 aa24.38■■□□□ 1.49
FSCN1-205ENST00000473330 PLCB2Q00722 1185 aa24.38■■□□□ 1.49
FSCN1-205ENST00000473330 TTC6Q86TZ1 520 aa24.38■■□□□ 1.49
FSCN1-205ENST00000473330 PRIMPOLQ96LW4 560 aa24.38■■□□□ 1.49
FSCN1-205ENST00000473330 GRM8O00222 908 aa24.37■■□□□ 1.49
FSCN1-205ENST00000473330 BICC1Q9H694 974 aaKnown RBP24.37■■□□□ 1.49
FSCN1-205ENST00000473330 UTYO14607 1347 aa24.37■■□□□ 1.49
FSCN1-205ENST00000473330 PSMA5P28066 241 aa24.37■■□□□ 1.49
FSCN1-205ENST00000473330 AMOTQ4VCS5 1084 aa24.37■■□□□ 1.49
FSCN1-205ENST00000473330 CDC37L1Q7L3B6 337 aa24.37■■□□□ 1.49
FSCN1-205ENST00000473330 LINS1Q8NG48 757 aa24.37■■□□□ 1.49
FSCN1-205ENST00000473330 TLR7Q9NYK1 1049 aaKnown RBP24.37■■□□□ 1.49
FSCN1-205ENST00000473330 A0A0D9SFI3 127 aa24.36■■□□□ 1.49
FSCN1-205ENST00000473330 G3BP1Q13283 466 aaKnown RBP eCLIP24.36■■□□□ 1.49
FSCN1-205ENST00000473330 KCNH5Q8NCM2 988 aa24.36■■□□□ 1.49
FSCN1-205ENST00000473330 NPHP4O75161 1426 aaPredicted RBP24.35■■□□□ 1.49
FSCN1-205ENST00000473330 KRT85P78386 507 aa24.35■■□□□ 1.49
FSCN1-205ENST00000473330 C1orf141Q5JVX7 400 aa24.35■■□□□ 1.49
FSCN1-205ENST00000473330 NCAPD2Q15021 1401 aa24.35■■□□□ 1.49
FSCN1-205ENST00000473330 CCDC192P0DO97 292 aa24.35■■□□□ 1.49
FSCN1-205ENST00000473330 FERMT3Q86UX7 667 aa24.35■■□□□ 1.49
FSCN1-205ENST00000473330 FAM173BQ6P4H8 233 aa24.34■■□□□ 1.49
FSCN1-205ENST00000473330 JARID2Q92833 1246 aaPredicted RBP24.34■■□□□ 1.49
FSCN1-205ENST00000473330 TAF6LQ9Y6J9 622 aa24.34■■□□□ 1.49
FSCN1-205ENST00000473330 PHRF1Q9P1Y6 1649 aaKnown RBP24.34■■□□□ 1.49
FSCN1-205ENST00000473330 PDIA4P13667 645 aaKnown RBP24.34■■□□□ 1.49
FSCN1-205ENST00000473330 TCEANC2Q96MN5 208 aa24.34■■□□□ 1.49
FSCN1-205ENST00000473330 BOLA2Q9H3K6 86 aa24.34■■□□□ 1.49
FSCN1-205ENST00000473330 KCNF1Q9H3M0 494 aa24.34■■□□□ 1.49
FSCN1-205ENST00000473330 ELP1O95163 1332 aa24.33■■□□□ 1.49
FSCN1-205ENST00000473330 OVOS2A0A0G2JMS6 1433 aa24.33■■□□□ 1.49
FSCN1-205ENST00000473330 HMGN5P82970 282 aaKnown RBP24.33■■□□□ 1.49
FSCN1-205ENST00000473330 BLOC1S2Q6QNY1 142 aa24.33■■□□□ 1.49
FSCN1-205ENST00000473330 LIG1P18858 919 aa24.33■■□□□ 1.48
FSCN1-205ENST00000473330 ALDH8A1Q9H2A2 487 aaPredicted RBP24.33■■□□□ 1.48
FSCN1-205ENST00000473330 MED23Q9ULK4 1368 aa24.32■■□□□ 1.48
FSCN1-205ENST00000473330 RPS6KB1P23443 525 aa24.32■■□□□ 1.48
FSCN1-205ENST00000473330 GTF2F1P35269 517 aaKnown RBP eCLIP24.32■■□□□ 1.482e-15■■■■■ 33.3
FSCN1-205ENST00000473330 PSME1Q06323 249 aa24.32■■□□□ 1.48
FSCN1-205ENST00000473330 FSD1Q9BTV5 496 aa24.32■■□□□ 1.48
FSCN1-205ENST00000473330 PDCP20941 246 aa24.31■■□□□ 1.48
FSCN1-205ENST00000473330 TOB2Q14106 344 aaPredicted RBP24.31■■□□□ 1.48
FSCN1-205ENST00000473330 ANKRD1Q15327 319 aa24.31■■□□□ 1.48
FSCN1-205ENST00000473330 KIAA1524Q8TCG1 905 aa24.31■■□□□ 1.48
FSCN1-205ENST00000473330 SIL1Q9H173 461 aa24.31■■□□□ 1.48
FSCN1-205ENST00000473330 CHMP3Q9Y3E7 222 aa24.31■■□□□ 1.48
FSCN1-205ENST00000473330 AIMP1Q12904 312 aaKnown RBP24.31■■□□□ 1.48
FSCN1-205ENST00000473330 RNF20Q5VTR2 975 aa24.31■■□□□ 1.48
FSCN1-205ENST00000473330 RBM33Q96EV2 1170 aaKnown RBP24.31■■□□□ 1.48
FSCN1-205ENST00000473330 PKNOX2Q96KN3 472 aa24.31■■□□□ 1.48
FSCN1-205ENST00000473330 NUP62CLQ9H1M0 184 aa24.31■■□□□ 1.48
FSCN1-205ENST00000473330 PDIA6Q15084 440 aa24.3■■□□□ 1.48
FSCN1-205ENST00000473330 MAP3K11Q16584 847 aa24.3■■□□□ 1.48
FSCN1-205ENST00000473330 FAM200AQ8TCP9 573 aa24.3■■□□□ 1.48
FSCN1-205ENST00000473330 DDX21Q9NR30 783 aaKnown RBP eCLIP24.3■■□□□ 1.48
FSCN1-205ENST00000473330 PYCARDQ9ULZ3 195 aa24.3■■□□□ 1.48
FSCN1-205ENST00000473330 MRVI1Q9Y6F6 885 aa24.3■■□□□ 1.48
FSCN1-205ENST00000473330 IGKV5-2P06315 115 aa24.3■■□□□ 1.48
FSCN1-205ENST00000473330 CAMK4Q16566 473 aa24.3■■□□□ 1.48
FSCN1-205ENST00000473330 ZNF589Q86UQ0 364 aaPredicted RBP24.3■■□□□ 1.48
FSCN1-205ENST00000473330 SPC24Q8NBT2 197 aa24.3■■□□□ 1.48
FSCN1-205ENST00000473330 TSC1Q92574 1164 aa24.3■■□□□ 1.48
FSCN1-205ENST00000473330 JCADQ9P266 1359 aa24.29■■□□□ 1.48
FSCN1-205ENST00000473330 DDX58O95786 925 aaKnown RBP24.29■■□□□ 1.48
FSCN1-205ENST00000473330 TPM3P06753 285 aa24.29■■□□□ 1.48
FSCN1-205ENST00000473330 LARP1Q6PKG0 1096 aaKnown RBP24.29■■□□□ 1.48
FSCN1-205ENST00000473330 KLHDC4Q8TBB5 520 aa24.29■■□□□ 1.48
FSCN1-205ENST00000473330 FER1L4A9Z1Z3 1794 aa24.29■■□□□ 1.48
FSCN1-205ENST00000473330 ESCO1Q5FWF5 840 aa24.29■■□□□ 1.48
FSCN1-205ENST00000473330 SIPA1L3O60292 1781 aaPredicted RBP24.28■■□□□ 1.48
FSCN1-205ENST00000473330 TYRO3Q06418 890 aa24.28■■□□□ 1.48
FSCN1-205ENST00000473330 TSGA10IPQ3SY00 556 aa24.27■■□□□ 1.48
FSCN1-205ENST00000473330 ARHGEF25Q86VW2 580 aa24.27■■□□□ 1.48
FSCN1-205ENST00000473330 ZNF710Q8N1W2 664 aa24.27■■□□□ 1.48
FSCN1-205ENST00000473330 ARID3AQ99856 593 aa24.27■■□□□ 1.48
FSCN1-205ENST00000473330 SCAND2PQ9GZW5 306 aaPredicted RBP24.27■■□□□ 1.48
FSCN1-205ENST00000473330 TFIP11Q9UBB9 837 aaKnown RBP24.27■■□□□ 1.48
FSCN1-205ENST00000473330 GCP02774 474 aa24.26■■□□□ 1.47
FSCN1-205ENST00000473330 DACT1Q9NYF0 836 aa24.26■■□□□ 1.47
FSCN1-205ENST00000473330 HMG20BQ9P0W2 317 aa24.26■■□□□ 1.47
FSCN1-205ENST00000473330 TAF5LO75529 589 aa24.26■■□□□ 1.47
FSCN1-205ENST00000473330 MRC1P22897 1456 aa24.26■■□□□ 1.47
FSCN1-205ENST00000473330 STK3Q13188 491 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms