RNA–Protein interactions for RNA: ENST00000473308.1

C1orf56-203, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-203ENST00000473308 SLX4Q8IY92 1834 aa11.8□□□□□ -0.52
C1orf56-203ENST00000473308 TNRC6CQ9HCJ0 1690 aaKnown RBP11.8□□□□□ -0.52
C1orf56-203ENST00000473308 RIC1Q4ADV7 1423 aa11.79□□□□□ -0.52
C1orf56-203ENST00000473308 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
C1orf56-203ENST00000473308 C21orf2O43822 256 aa11.79□□□□□ -0.52
C1orf56-203ENST00000473308 RASSF7Q02833 373 aa11.79□□□□□ -0.52
C1orf56-203ENST00000473308 EXOSC9Q06265 439 aaKnown RBP11.79□□□□□ -0.52
C1orf56-203ENST00000473308 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
C1orf56-203ENST00000473308 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
C1orf56-203ENST00000473308 C3orf67Q6ZVT6 689 aa11.79□□□□□ -0.52
C1orf56-203ENST00000473308 RIC3Q7Z5B4 369 aa11.79□□□□□ -0.52
C1orf56-203ENST00000473308 MIER1Q8N108 512 aa11.79□□□□□ -0.52
C1orf56-203ENST00000473308 MYH16Q9H6N6 1097 aa11.79□□□□□ -0.52
C1orf56-203ENST00000473308 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
C1orf56-203ENST00000473308 RNF123Q5XPI4 1314 aa11.79□□□□□ -0.52
C1orf56-203ENST00000473308 SBF1O95248 1867 aa11.78□□□□□ -0.52
C1orf56-203ENST00000473308 ATP5J2-PTCD1G3V325 749 aa11.78□□□□□ -0.52
C1orf56-203ENST00000473308 NFKBIEO00221 500 aa11.78□□□□□ -0.52
C1orf56-203ENST00000473308 TRIM28Q13263 835 aaKnown RBP11.78□□□□□ -0.52
C1orf56-203ENST00000473308 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
C1orf56-203ENST00000473308 C7orf43Q8WVR3 580 aa11.78□□□□□ -0.52
C1orf56-203ENST00000473308 ZNF428Q96B54 188 aa11.78□□□□□ -0.52
C1orf56-203ENST00000473308 STK31Q9BXU1 1019 aa11.78□□□□□ -0.52
C1orf56-203ENST00000473308 TRMT112Q9UI30 125 aaKnown RBP11.78□□□□□ -0.52
C1orf56-203ENST00000473308 ARFGEF2Q9Y6D5 1785 aa11.77□□□□□ -0.52
C1orf56-203ENST00000473308 CACNA1SQ13698 1873 aa11.77□□□□□ -0.53
C1orf56-203ENST00000473308 SLC4A2P04920 1241 aa11.77□□□□□ -0.53
C1orf56-203ENST00000473308 HCLS1P14317 486 aaPredicted RBP11.77□□□□□ -0.53
C1orf56-203ENST00000473308 ALDH1B1P30837 517 aa11.77□□□□□ -0.53
C1orf56-203ENST00000473308 HOXA10P31260 410 aaPredicted RBP11.77□□□□□ -0.53
C1orf56-203ENST00000473308 PRELPP51888 382 aa11.77□□□□□ -0.53
C1orf56-203ENST00000473308 G2E3Q7L622 706 aa11.77□□□□□ -0.53
C1orf56-203ENST00000473308 NLRP3Q96P20 1036 aa11.77□□□□□ -0.53
C1orf56-203ENST00000473308 SH3TC1Q8TE82 1336 aa11.77□□□□□ -0.53
C1orf56-203ENST00000473308 PI4KAP2A4QPH2 592 aa11.76□□□□□ -0.53
C1orf56-203ENST00000473308 DDX58O95786 925 aaKnown RBP11.76□□□□□ -0.53
C1orf56-203ENST00000473308 KSR2Q6VAB6 950 aa11.76□□□□□ -0.53
C1orf56-203ENST00000473308 PI4KAP1Q8N8J0 262 aa11.76□□□□□ -0.53
C1orf56-203ENST00000473308 RBM17Q96I25 401 aaKnown RBP11.76□□□□□ -0.53
C1orf56-203ENST00000473308 MYD88Q99836 296 aa11.76□□□□□ -0.53
C1orf56-203ENST00000473308 METTL22Q9BUU2 404 aaPredicted RBP11.76□□□□□ -0.53
C1orf56-203ENST00000473308 RNF181Q9P0P0 153 aa11.76□□□□□ -0.53
C1orf56-203ENST00000473308 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
C1orf56-203ENST00000473308 CACNA1FO60840 1977 aa11.76□□□□□ -0.53
C1orf56-203ENST00000473308 LMNB1P20700 586 aa11.75□□□□□ -0.53
C1orf56-203ENST00000473308 SOGA3Q5TF21 947 aa11.75□□□□□ -0.53
C1orf56-203ENST00000473308 OLFM4Q6UX06 510 aa11.75□□□□□ -0.53
C1orf56-203ENST00000473308 RPGRQ92834 1020 aaKnown RBP11.75□□□□□ -0.53
C1orf56-203ENST00000473308 FAM89AQ96GI7 184 aa11.75□□□□□ -0.53
C1orf56-203ENST00000473308 CRAMP1Q96RY5 1269 aa11.75□□□□□ -0.53
C1orf56-203ENST00000473308 MAP3K2Q9Y2U5 619 aa11.75□□□□□ -0.53
C1orf56-203ENST00000473308 CCDC88AQ3V6T2 1871 aa11.74□□□□□ -0.53
C1orf56-203ENST00000473308 E9PSI1 815 aa11.74□□□□□ -0.53
C1orf56-203ENST00000473308 SLFN5Q08AF3 891 aa11.74□□□□□ -0.53
C1orf56-203ENST00000473308 FLIIQ13045 1269 aa11.74□□□□□ -0.53
C1orf56-203ENST00000473308 CCDC93Q567U6 631 aa11.74□□□□□ -0.53
C1orf56-203ENST00000473308 ZNF526Q8TF50 670 aaPredicted RBP11.74□□□□□ -0.53
C1orf56-203ENST00000473308 GPBP1L1Q9HC44 474 aaPredicted RBP11.74□□□□□ -0.53
C1orf56-203ENST00000473308 LTBP3Q9NS15 1303 aa11.74□□□□□ -0.53
C1orf56-203ENST00000473308 IGKV5-2P06315 115 aa11.73□□□□□ -0.53
C1orf56-203ENST00000473308 LAMB2P55268 1798 aa11.73□□□□□ -0.53
C1orf56-203ENST00000473308 RTL5Q5HYW3 569 aaPredicted RBP11.73□□□□□ -0.53
C1orf56-203ENST00000473308 SLC51AQ86UW1 340 aa11.73□□□□□ -0.53
C1orf56-203ENST00000473308 ZBTB38Q8NAP3 1195 aaPredicted RBP11.73□□□□□ -0.53
C1orf56-203ENST00000473308 CCDC191Q8NCU4 936 aa11.73□□□□□ -0.53
C1orf56-203ENST00000473308 CDCA7LQ96GN5 454 aa11.73□□□□□ -0.53
C1orf56-203ENST00000473308 TAOK3Q9H2K8 898 aa11.73□□□□□ -0.53
C1orf56-203ENST00000473308 CWC25Q9NXE8 425 aaPredicted RBP11.73□□□□□ -0.53
C1orf56-203ENST00000473308 DDX60Q8IY21 1712 aaKnown RBP11.72□□□□□ -0.53
C1orf56-203ENST00000473308 ABCC4O15439 1325 aa11.72□□□□□ -0.53
C1orf56-203ENST00000473308 IRS4O14654 1257 aaPredicted RBP11.72□□□□□ -0.53
C1orf56-203ENST00000473308 PCCAP05165 728 aaPredicted RBP11.72□□□□□ -0.53
C1orf56-203ENST00000473308 SF3B3Q15393 1217 aaKnown RBP11.72□□□□□ -0.53
C1orf56-203ENST00000473308 RTKN2Q8IZC4 609 aa11.72□□□□□ -0.53
C1orf56-203ENST00000473308 SNED1Q8TER0 1413 aa11.71□□□□□ -0.53
C1orf56-203ENST00000473308 ZC3H4Q9UPT8 1303 aaKnown RBP11.71□□□□□ -0.53
C1orf56-203ENST00000473308 PPEF1O14829 653 aaPredicted RBP11.71□□□□□ -0.53
C1orf56-203ENST00000473308 FKBP4Q02790 459 aaKnown RBP eCLIP11.71□□□□□ -0.53
C1orf56-203ENST00000473308 NEXNQ0ZGT2 675 aa11.71□□□□□ -0.53
C1orf56-203ENST00000473308 FKBP5Q13451 457 aaPredicted RBP11.71□□□□□ -0.53
C1orf56-203ENST00000473308 TRMT2AQ8IZ69 625 aaKnown RBP11.71□□□□□ -0.53
C1orf56-203ENST00000473308 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.53
C1orf56-203ENST00000473308 JARID2Q92833 1246 aaPredicted RBP11.71□□□□□ -0.53
C1orf56-203ENST00000473308 DICER1Q9UPY3 1922 aaKnown RBP11.7□□□□□ -0.54
C1orf56-203ENST00000473308 NEURL1BA8MQ27 555 aa11.7□□□□□ -0.54
C1orf56-203ENST00000473308 BBOX1O75936 387 aa11.7□□□□□ -0.54
C1orf56-203ENST00000473308 GRAPQ13588 217 aa11.7□□□□□ -0.54
C1orf56-203ENST00000473308 CWF19L2Q2TBE0 894 aaKnown RBP11.7□□□□□ -0.54
C1orf56-203ENST00000473308 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
C1orf56-203ENST00000473308 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
C1orf56-203ENST00000473308 GRAPLQ8TC17 118 aaPredicted RBP11.7□□□□□ -0.54
C1orf56-203ENST00000473308 PSMD1Q99460 953 aa11.7□□□□□ -0.54
C1orf56-203ENST00000473308 ZNF277Q9NRM2 450 aaPredicted RBP11.7□□□□□ -0.54
C1orf56-203ENST00000473308 ATP6V0A2Q9Y487 856 aa11.7□□□□□ -0.54
C1orf56-203ENST00000473308 TAF1P21675 1872 aa11.7□□□□□ -0.54
C1orf56-203ENST00000473308 CDHR2Q9BYE9 1310 aa11.69□□□□□ -0.54
C1orf56-203ENST00000473308 KIF3CO14782 793 aa11.69□□□□□ -0.54
C1orf56-203ENST00000473308 HSP90B1P14625 803 aaKnown RBP11.69□□□□□ -0.54
C1orf56-203ENST00000473308 GRIPAP1Q4V328 841 aa11.69□□□□□ -0.54
C1orf56-203ENST00000473308 NMRK2Q9NPI5 230 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms