RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 KLRG2A4D1S0 409 aaPredicted RBP20.14■□□□□ 0.81
MRPL55-226ENST00000473066 C1QTNF8P60827 252 aa20.14■□□□□ 0.81
MRPL55-226ENST00000473066 UTP14AQ9BVJ6 771 aaKnown RBP20.14■□□□□ 0.81
MRPL55-226ENST00000473066 IL16Q14005 1332 aa20.13■□□□□ 0.81
MRPL55-226ENST00000473066 KDM2BQ8NHM5 1336 aa20.13■□□□□ 0.81
MRPL55-226ENST00000473066 ALDH1B1P30837 517 aa20.13■□□□□ 0.81
MRPL55-226ENST00000473066 GOLGA2Q08379 1002 aa20.13■□□□□ 0.81
MRPL55-226ENST00000473066 CCDC93Q567U6 631 aa20.13■□□□□ 0.81
MRPL55-226ENST00000473066 PLBD2Q8NHP8 589 aa20.13■□□□□ 0.81
MRPL55-226ENST00000473066 TAOK3Q9H2K8 898 aa20.13■□□□□ 0.81
MRPL55-226ENST00000473066 NFKBIEO00221 500 aa20.12■□□□□ 0.81
MRPL55-226ENST00000473066 TCIRG1Q13488 830 aa20.12■□□□□ 0.81
MRPL55-226ENST00000473066 CCDC30Q5VVM6 783 aa20.12■□□□□ 0.81
MRPL55-226ENST00000473066 ANKRD13DQ6ZTN6 518 aa20.12■□□□□ 0.81
MRPL55-226ENST00000473066 TSR2Q969E8 191 aaKnown RBP20.12■□□□□ 0.81
MRPL55-226ENST00000473066 SALL2Q9Y467 1007 aaPredicted RBP20.12■□□□□ 0.81
MRPL55-226ENST00000473066 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
MRPL55-226ENST00000473066 LTBP3Q9NS15 1303 aa20.1■□□□□ 0.81
MRPL55-226ENST00000473066 CRY2Q49AN0 593 aa20.1■□□□□ 0.81
MRPL55-226ENST00000473066 NLRP10Q86W26 655 aa20.1■□□□□ 0.81
MRPL55-226ENST00000473066 NLRP3Q96P20 1036 aa20.1■□□□□ 0.81
MRPL55-226ENST00000473066 STK31Q9BXU1 1019 aa20.1■□□□□ 0.81
MRPL55-226ENST00000473066 TRMT112Q9UI30 125 aaKnown RBP20.1■□□□□ 0.81
MRPL55-226ENST00000473066 RIC3Q7Z5B4 369 aa20.09■□□□□ 0.81
MRPL55-226ENST00000473066 RBM17Q96I25 401 aaKnown RBP20.09■□□□□ 0.81
MRPL55-226ENST00000473066 DDX60Q8IY21 1712 aaKnown RBP20.09■□□□□ 0.81
MRPL55-226ENST00000473066 SH3TC1Q8TE82 1336 aa20.08■□□□□ 0.81
MRPL55-226ENST00000473066 DDX58O95786 925 aaKnown RBP20.08■□□□□ 0.81
MRPL55-226ENST00000473066 WDR63Q8IWG1 891 aa20.08■□□□□ 0.81
MRPL55-226ENST00000473066 TWISTNBQ3B726 338 aaPredicted RBP20.07■□□□□ 0.8
MRPL55-226ENST00000473066 C16orf71Q8IYS4 520 aaPredicted RBP20.07■□□□□ 0.8
MRPL55-226ENST00000473066 FANCIQ9NVI1 1328 aa20.06■□□□□ 0.8
MRPL55-226ENST00000473066 RTKN2Q8IZC4 609 aa20.06■□□□□ 0.8
MRPL55-226ENST00000473066 TSPYL6Q8N831 410 aa20.06■□□□□ 0.8
MRPL55-226ENST00000473066 TMX4Q9H1E5 349 aaPredicted RBP20.06■□□□□ 0.8
MRPL55-226ENST00000473066 NMRK2Q9NPI5 230 aa20.06■□□□□ 0.8
MRPL55-226ENST00000473066 KIF3CO14782 793 aa20.05■□□□□ 0.8
MRPL55-226ENST00000473066 HOXA10P31260 410 aaPredicted RBP20.05■□□□□ 0.8
MRPL55-226ENST00000473066 FKBP4Q02790 459 aaKnown RBP eCLIP20.05■□□□□ 0.8
MRPL55-226ENST00000473066 CC2D2BQ6DHV5 1058 aa20.05■□□□□ 0.8
MRPL55-226ENST00000473066 CRAMP1Q96RY5 1269 aa20.05■□□□□ 0.8
MRPL55-226ENST00000473066 PHAXQ9H814 394 aaKnown RBP20.05■□□□□ 0.8
MRPL55-226ENST00000473066 ATP5J2-PTCD1G3V325 749 aa20.04■□□□□ 0.8
MRPL55-226ENST00000473066 PPEF1O14829 653 aaPredicted RBP20.04■□□□□ 0.8
MRPL55-226ENST00000473066 PRELPP51888 382 aa20.04■□□□□ 0.8
MRPL55-226ENST00000473066 SLC10A5Q5PT55 438 aa20.04■□□□□ 0.8
MRPL55-226ENST00000473066 C7orf43Q8WVR3 580 aa20.04■□□□□ 0.8
MRPL55-226ENST00000473066 ISCA1Q9BUE6 129 aa20.04■□□□□ 0.8
MRPL55-226ENST00000473066 HCLS1P14317 486 aaPredicted RBP20.03■□□□□ 0.8
MRPL55-226ENST00000473066 DPY19L2Q6NUT2 758 aa20.03■□□□□ 0.8
MRPL55-226ENST00000473066 MYH16Q9H6N6 1097 aa20.03■□□□□ 0.8
MRPL55-226ENST00000473066 GLTPD2A6NH11 291 aa20.02■□□□□ 0.8
MRPL55-226ENST00000473066 GRIPAP1Q4V328 841 aa20.02■□□□□ 0.8
MRPL55-226ENST00000473066 C3orf67Q6ZVT6 689 aa20.02■□□□□ 0.8
MRPL55-226ENST00000473066 DDX46Q7L014 1031 aaKnown RBP20.02■□□□□ 0.8
MRPL55-226ENST00000473066 MYD88Q99836 296 aa20.02■□□□□ 0.8
MRPL55-226ENST00000473066 TAF1P21675 1872 aa20.02■□□□□ 0.8
MRPL55-226ENST00000473066 MYH3P11055 1940 aa20.02■□□□□ 0.79
MRPL55-226ENST00000473066 HSP90B1P14625 803 aaKnown RBP20.01■□□□□ 0.79
MRPL55-226ENST00000473066 OLFM4Q6UX06 510 aa20.01■□□□□ 0.79
MRPL55-226ENST00000473066 ZNF428Q96B54 188 aa20.01■□□□□ 0.79
MRPL55-226ENST00000473066 WDR90Q96KV7 1748 aa20.01■□□□□ 0.79
MRPL55-226ENST00000473066 ABCC4O15439 1325 aa20.01■□□□□ 0.79
MRPL55-226ENST00000473066 TCERG1O14776 1098 aaKnown RBP20■□□□□ 0.79
MRPL55-226ENST00000473066 TOMM70O94826 608 aa20■□□□□ 0.79
MRPL55-226ENST00000473066 TRIM28Q13263 835 aaKnown RBP20■□□□□ 0.79
MRPL55-226ENST00000473066 FAM89AQ96GI7 184 aa20■□□□□ 0.79
MRPL55-226ENST00000473066 ZNF277Q9NRM2 450 aaPredicted RBP20■□□□□ 0.79
MRPL55-226ENST00000473066 NEXNQ0ZGT2 675 aa19.99■□□□□ 0.79
MRPL55-226ENST00000473066 SYNE4Q8N205 404 aa19.99■□□□□ 0.79
MRPL55-226ENST00000473066 RRAGCQ9HB90 399 aa19.99■□□□□ 0.79
MRPL55-226ENST00000473066 IARSP41252 1262 aaKnown RBP19.98■□□□□ 0.79
MRPL55-226ENST00000473066 EXOSC9Q06265 439 aaKnown RBP19.98■□□□□ 0.79
MRPL55-226ENST00000473066 RTL5Q5HYW3 569 aaPredicted RBP19.98■□□□□ 0.79
MRPL55-226ENST00000473066 CCDC191Q8NCU4 936 aa19.98■□□□□ 0.79
MRPL55-226ENST00000473066 PSMD1Q99460 953 aa19.98■□□□□ 0.79
MRPL55-226ENST00000473066 METTL22Q9BUU2 404 aaPredicted RBP19.98■□□□□ 0.79
MRPL55-226ENST00000473066 CWC25Q9NXE8 425 aaPredicted RBP19.98■□□□□ 0.79
MRPL55-226ENST00000473066 MAP3K2Q9Y2U5 619 aa19.98■□□□□ 0.79
MRPL55-226ENST00000473066 LRRC37AA6NMS7 1700 aa19.97■□□□□ 0.79
MRPL55-226ENST00000473066 IRS4O14654 1257 aaPredicted RBP19.97■□□□□ 0.79
MRPL55-226ENST00000473066 SLC4A2P04920 1241 aa19.97■□□□□ 0.79
MRPL55-226ENST00000473066 KSR2Q6VAB6 950 aa19.97■□□□□ 0.79
MRPL55-226ENST00000473066 SCN4AP35499 1836 aa19.97■□□□□ 0.79
MRPL55-226ENST00000473066 SNED1Q8TER0 1413 aa19.96■□□□□ 0.79
MRPL55-226ENST00000473066 PI4KAP2A4QPH2 592 aa19.96■□□□□ 0.79
MRPL55-226ENST00000473066 BBOX1O75936 387 aa19.96■□□□□ 0.79
MRPL55-226ENST00000473066 VEGFAP15692 232 aaPredicted RBP19.96■□□□□ 0.79
MRPL55-226ENST00000473066 GRAPQ13588 217 aa19.96■□□□□ 0.79
MRPL55-226ENST00000473066 PI4KAP1Q8N8J0 262 aa19.96■□□□□ 0.79
MRPL55-226ENST00000473066 ZBTB38Q8NAP3 1195 aaPredicted RBP19.96■□□□□ 0.79
MRPL55-226ENST00000473066 RBM46Q8TBY0 533 aaKnown RBP19.96■□□□□ 0.79
MRPL55-226ENST00000473066 GRAPLQ8TC17 118 aaPredicted RBP19.96■□□□□ 0.79
MRPL55-226ENST00000473066 JDP2Q8WYK2 163 aa19.96■□□□□ 0.79
MRPL55-226ENST00000473066 ATP6V0A2Q9Y487 856 aa19.96■□□□□ 0.79
MRPL55-226ENST00000473066 CCER2I3L3R5 266 aa19.95■□□□□ 0.78
MRPL55-226ENST00000473066 TMC4Q7Z404 712 aa19.95■□□□□ 0.78
MRPL55-226ENST00000473066 PCCAP05165 728 aaPredicted RBP19.94■□□□□ 0.78
MRPL55-226ENST00000473066 FLIIQ13045 1269 aa19.94■□□□□ 0.78
MRPL55-226ENST00000473066 FKBP5Q13451 457 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms