RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 NCBP3Q53F19 620 aaKnown RBP25.07■■□□□ 1.6
COMMD1-208ENST00000472729 RIC3Q7Z5B4 369 aa25.07■■□□□ 1.6
COMMD1-208ENST00000472729 CRY2Q49AN0 593 aa25.06■■□□□ 1.6
COMMD1-208ENST00000472729 NLRP10Q86W26 655 aa25.06■■□□□ 1.6
COMMD1-208ENST00000472729 C8orf58Q8NAV2 365 aa25.06■■□□□ 1.6
COMMD1-208ENST00000472729 TSR2Q969E8 191 aaKnown RBP25.06■■□□□ 1.6
COMMD1-208ENST00000472729 STK31Q9BXU1 1019 aa25.06■■□□□ 1.6
COMMD1-208ENST00000472729 BRCA1P38398 1863 aaKnown RBP25.06■■□□□ 1.6
COMMD1-208ENST00000472729 ABCC12Q96J65 1359 aa25.05■■□□□ 1.6
COMMD1-208ENST00000472729 DDX58O95786 925 aaKnown RBP25.05■■□□□ 1.6
COMMD1-208ENST00000472729 NMRK2Q9NPI5 230 aa25.05■■□□□ 1.6
COMMD1-208ENST00000472729 ARFGEF1Q9Y6D6 1849 aa25.05■■□□□ 1.6
COMMD1-208ENST00000472729 IL16Q14005 1332 aa25.04■■□□□ 1.6
COMMD1-208ENST00000472729 SH3TC1Q8TE82 1336 aa25.04■■□□□ 1.6
COMMD1-208ENST00000472729 LTBP3Q9NS15 1303 aa25.04■■□□□ 1.6
COMMD1-208ENST00000472729 KIF3CO14782 793 aa25.03■■□□□ 1.6
COMMD1-208ENST00000472729 TOMM70O94826 608 aa25.03■■□□□ 1.6
COMMD1-208ENST00000472729 CC2D2BQ6DHV5 1058 aa25.03■■□□□ 1.6
COMMD1-208ENST00000472729 GLTPD2A6NH11 291 aa25.02■■□□□ 1.6
COMMD1-208ENST00000472729 HOXA10P31260 410 aaPredicted RBP25.02■■□□□ 1.6
COMMD1-208ENST00000472729 GRIPAP1Q4V328 841 aa25.02■■□□□ 1.6
COMMD1-208ENST00000472729 SLC10A5Q5PT55 438 aa25.02■■□□□ 1.6
COMMD1-208ENST00000472729 C7orf43Q8WVR3 580 aa25.02■■□□□ 1.6
COMMD1-208ENST00000472729 CRAMP1Q96RY5 1269 aa25.02■■□□□ 1.6
COMMD1-208ENST00000472729 RRAGCQ9HB90 399 aa25.02■■□□□ 1.6
COMMD1-208ENST00000472729 ATP5J2-PTCD1G3V325 749 aa25.01■■□□□ 1.59
COMMD1-208ENST00000472729 FKBP4Q02790 459 aaKnown RBP eCLIP25.01■■□□□ 1.59
COMMD1-208ENST00000472729 WDR63Q8IWG1 891 aa25.01■■□□□ 1.59
COMMD1-208ENST00000472729 TCERG1O14776 1098 aaKnown RBP25■■□□□ 1.59
COMMD1-208ENST00000472729 HCLS1P14317 486 aaPredicted RBP25■■□□□ 1.59
COMMD1-208ENST00000472729 HSP90B1P14625 803 aaKnown RBP25■■□□□ 1.59
COMMD1-208ENST00000472729 TWISTNBQ3B726 338 aaPredicted RBP25■■□□□ 1.59
COMMD1-208ENST00000472729 PHAXQ9H814 394 aaKnown RBP25■■□□□ 1.59
COMMD1-208ENST00000472729 PPEF1O14829 653 aaPredicted RBP24.99■■□□□ 1.59
COMMD1-208ENST00000472729 PRELPP51888 382 aa24.99■■□□□ 1.59
COMMD1-208ENST00000472729 RIC1Q4ADV7 1423 aa24.99■■□□□ 1.59
COMMD1-208ENST00000472729 DDX46Q7L014 1031 aaKnown RBP24.99■■□□□ 1.59
COMMD1-208ENST00000472729 ANKRD31Q8N7Z5 1873 aa24.99■■□□□ 1.59
COMMD1-208ENST00000472729 DLEC1Q9Y238 1755 aa24.99■■□□□ 1.59
COMMD1-208ENST00000472729 VEGFAP15692 232 aaPredicted RBP24.98■■□□□ 1.59
COMMD1-208ENST00000472729 TSPYL6Q8N831 410 aa24.98■■□□□ 1.59
COMMD1-208ENST00000472729 ZNF428Q96B54 188 aa24.98■■□□□ 1.59
COMMD1-208ENST00000472729 ZNF277Q9NRM2 450 aaPredicted RBP24.98■■□□□ 1.59
COMMD1-208ENST00000472729 MYH16Q9H6N6 1097 aa24.97■■□□□ 1.59
COMMD1-208ENST00000472729 OLFM4Q6UX06 510 aa24.96■■□□□ 1.59
COMMD1-208ENST00000472729 SYNE4Q8N205 404 aa24.96■■□□□ 1.59
COMMD1-208ENST00000472729 JDP2Q8WYK2 163 aa24.96■■□□□ 1.59
COMMD1-208ENST00000472729 FAM89AQ96GI7 184 aa24.96■■□□□ 1.59
COMMD1-208ENST00000472729 MYD88Q99836 296 aa24.96■■□□□ 1.59
COMMD1-208ENST00000472729 ISCA1Q9BUE6 129 aa24.96■■□□□ 1.59
COMMD1-208ENST00000472729 BBOX1O75936 387 aa24.95■■□□□ 1.58
COMMD1-208ENST00000472729 C3orf67Q6ZVT6 689 aa24.95■■□□□ 1.58
COMMD1-208ENST00000472729 COL11A2P13942 1736 aaPredicted RBP24.95■■□□□ 1.58
COMMD1-208ENST00000472729 NEXNQ0ZGT2 675 aa24.94■■□□□ 1.58
COMMD1-208ENST00000472729 TRIM28Q13263 835 aaKnown RBP24.94■■□□□ 1.58
COMMD1-208ENST00000472729 RTL5Q5HYW3 569 aaPredicted RBP24.94■■□□□ 1.58
COMMD1-208ENST00000472729 RBM46Q8TBY0 533 aaKnown RBP24.94■■□□□ 1.58
COMMD1-208ENST00000472729 PSMD1Q99460 953 aa24.94■■□□□ 1.58
COMMD1-208ENST00000472729 FANCIQ9NVI1 1328 aa24.93■■□□□ 1.58
COMMD1-208ENST00000472729 SLC4A2P04920 1241 aa24.93■■□□□ 1.58
COMMD1-208ENST00000472729 IARSP41252 1262 aaKnown RBP24.93■■□□□ 1.58
COMMD1-208ENST00000472729 NUP98P52948 1817 aa24.93■■□□□ 1.58
COMMD1-208ENST00000472729 HSPA6P17066 643 aa24.92■■□□□ 1.58
COMMD1-208ENST00000472729 IRS4O14654 1257 aaPredicted RBP24.91■■□□□ 1.58
COMMD1-208ENST00000472729 KSR2Q6VAB6 950 aa24.91■■□□□ 1.58
COMMD1-208ENST00000472729 ZBTB38Q8NAP3 1195 aaPredicted RBP24.91■■□□□ 1.58
COMMD1-208ENST00000472729 CCDC191Q8NCU4 936 aa24.91■■□□□ 1.58
COMMD1-208ENST00000472729 METTL22Q9BUU2 404 aaPredicted RBP24.91■■□□□ 1.58
COMMD1-208ENST00000472729 CWC25Q9NXE8 425 aaPredicted RBP24.91■■□□□ 1.58
COMMD1-208ENST00000472729 MAP3K2Q9Y2U5 619 aa24.91■■□□□ 1.58
COMMD1-208ENST00000472729 ATP6V0A2Q9Y487 856 aa24.91■■□□□ 1.58
COMMD1-208ENST00000472729 ABCC4O15439 1325 aa24.9■■□□□ 1.58
COMMD1-208ENST00000472729 SUPT20HQ8NEM7 779 aa24.9■■□□□ 1.58
COMMD1-208ENST00000472729 SLX4Q8IY92 1834 aa24.9■■□□□ 1.58
COMMD1-208ENST00000472729 PI4KAP2A4QPH2 592 aa24.89■■□□□ 1.58
COMMD1-208ENST00000472729 FSTL1Q12841 308 aa24.89■■□□□ 1.58
COMMD1-208ENST00000472729 GRAPQ13588 217 aa24.89■■□□□ 1.58
COMMD1-208ENST00000472729 TMC4Q7Z404 712 aa24.89■■□□□ 1.58
COMMD1-208ENST00000472729 LARGE2Q8N3Y3 721 aa24.89■■□□□ 1.58
COMMD1-208ENST00000472729 PI4KAP1Q8N8J0 262 aa24.89■■□□□ 1.58
COMMD1-208ENST00000472729 SMC1BQ8NDV3 1235 aa24.89■■□□□ 1.58
COMMD1-208ENST00000472729 GRAPLQ8TC17 118 aaPredicted RBP24.89■■□□□ 1.58
COMMD1-208ENST00000472729 IQCA1LA6NCM1 817 aa24.88■■□□□ 1.57
COMMD1-208ENST00000472729 DDNO94850 711 aaPredicted RBP24.88■■□□□ 1.57
COMMD1-208ENST00000472729 EIF6P56537 245 aaKnown RBP24.88■■□□□ 1.57
COMMD1-208ENST00000472729 EXOSC9Q06265 439 aaKnown RBP24.88■■□□□ 1.57
COMMD1-208ENST00000472729 DPP8Q6V1X1 898 aaPredicted RBP24.88■■□□□ 1.57
COMMD1-208ENST00000472729 SP8Q8IXZ3 490 aa24.87■■□□□ 1.57
COMMD1-208ENST00000472729 FKBP5Q13451 457 aaPredicted RBP24.86■■□□□ 1.57
COMMD1-208ENST00000472729 MPNDQ8N594 471 aa24.86■■□□□ 1.57
COMMD1-208ENST00000472729 TNRC6CQ9HCJ0 1690 aaKnown RBP24.85■■□□□ 1.57
COMMD1-208ENST00000472729 PPIP5K2O43314 1243 aa24.85■■□□□ 1.57
COMMD1-208ENST00000472729 PCCAP05165 728 aaPredicted RBP24.85■■□□□ 1.57
COMMD1-208ENST00000472729 APLP1P51693 650 aa24.85■■□□□ 1.57
COMMD1-208ENST00000472729 SF3B3Q15393 1217 aaKnown RBP24.85■■□□□ 1.57
COMMD1-208ENST00000472729 NIM1KQ8IY84 436 aa24.85■■□□□ 1.57
COMMD1-208ENST00000472729 FLIIQ13045 1269 aa24.84■■□□□ 1.57
COMMD1-208ENST00000472729 VPS33BQ9H267 617 aa24.84■■□□□ 1.57
COMMD1-208ENST00000472729 VAMP4O75379 141 aa24.83■■□□□ 1.57
COMMD1-208ENST00000472729 CCDC152Q4G0S7 254 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms