RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CRY2Q49AN0 593 aa25.54■■□□□ 1.68
SORT1-203ENST00000471996 USP50Q70EL3 339 aaPredicted RBP25.54■■□□□ 1.68
SORT1-203ENST00000471996 HLFQ16534 295 aa25.53■■□□□ 1.68
SORT1-203ENST00000471996 PHACTR3Q96KR7 559 aa25.53■■□□□ 1.68
SORT1-203ENST00000471996 TSKSQ9UJT2 592 aa25.53■■□□□ 1.68
SORT1-203ENST00000471996 LTBP1Q14766 1721 aa25.53■■□□□ 1.68
SORT1-203ENST00000471996 COL4A5P29400 1685 aa25.52■■□□□ 1.68
SORT1-203ENST00000471996 TRAF5O00463 557 aa25.52■■□□□ 1.68
SORT1-203ENST00000471996 GRIPAP1Q4V328 841 aa25.51■■□□□ 1.67
SORT1-203ENST00000471996 AOC2O75106 756 aa25.5■■□□□ 1.67
SORT1-203ENST00000471996 LARGE2Q8N3Y3 721 aa25.5■■□□□ 1.67
SORT1-203ENST00000471996 ABCC12Q96J65 1359 aa25.49■■□□□ 1.67
SORT1-203ENST00000471996 KIF7Q2M1P5 1343 aa25.49■■□□□ 1.67
SORT1-203ENST00000471996 CA12O43570 354 aa25.49■■□□□ 1.67
SORT1-203ENST00000471996 MCOLN1Q9GZU1 580 aa25.49■■□□□ 1.67
SORT1-203ENST00000471996 NYXQ9GZU5 481 aa25.49■■□□□ 1.67
SORT1-203ENST00000471996 HOXA10P31260 410 aaPredicted RBP25.48■■□□□ 1.67
SORT1-203ENST00000471996 PRKAR2BP31323 418 aa25.48■■□□□ 1.67
SORT1-203ENST00000471996 SAPCD2Q86UD0 394 aa25.47■■□□□ 1.67
SORT1-203ENST00000471996 NUTM1Q86Y26 1132 aa25.47■■□□□ 1.67
SORT1-203ENST00000471996 RPGRQ92834 1020 aaKnown RBP25.46■■□□□ 1.67
SORT1-203ENST00000471996 CFAP44Q96MT7 982 aa25.46■■□□□ 1.67
SORT1-203ENST00000471996 RSPH6AQ9H0K4 717 aa25.46■■□□□ 1.67
SORT1-203ENST00000471996 ADARB2Q9NS39 739 aaKnown RBP25.46■■□□□ 1.67
SORT1-203ENST00000471996 NIM1KQ8IY84 436 aa25.45■■□□□ 1.66
SORT1-203ENST00000471996 RTF1Q92541 710 aaKnown RBP25.45■■□□□ 1.66
SORT1-203ENST00000471996 MCM10Q7L590 875 aa25.44■■□□□ 1.66
SORT1-203ENST00000471996 HHIPL1Q96JK4 782 aa25.44■■□□□ 1.66
SORT1-203ENST00000471996 GPRC5DQ9NZD1 345 aa25.44■■□□□ 1.66
SORT1-203ENST00000471996 ERVV-1B6SEH8 477 aa25.43■■□□□ 1.66
SORT1-203ENST00000471996 CELF2O95319 508 aaKnown RBP25.43■■□□□ 1.66
SORT1-203ENST00000471996 BRPF1P55201 1214 aaPredicted RBP25.43■■□□□ 1.66
SORT1-203ENST00000471996 CRAMP1Q96RY5 1269 aa25.43■■□□□ 1.66
SORT1-203ENST00000471996 SLC51AQ86UW1 340 aa25.42■■□□□ 1.66
SORT1-203ENST00000471996 NPC1L1Q9UHC9 1359 aa25.42■■□□□ 1.66
SORT1-203ENST00000471996 TRPM7Q96QT4 1865 aa25.41■■□□□ 1.66
SORT1-203ENST00000471996 RIC1Q4ADV7 1423 aa25.41■■□□□ 1.66
SORT1-203ENST00000471996 PPEF1O14829 653 aaPredicted RBP25.41■■□□□ 1.66
SORT1-203ENST00000471996 PPIP5K2O43314 1243 aa25.41■■□□□ 1.66
SORT1-203ENST00000471996 RBM17Q96I25 401 aaKnown RBP25.41■■□□□ 1.66
SORT1-203ENST00000471996 PCGF6Q9BYE7 350 aa25.41■■□□□ 1.66
SORT1-203ENST00000471996 VPS33BQ9H267 617 aa25.4■■□□□ 1.66
SORT1-203ENST00000471996 TCERG1O14776 1098 aaKnown RBP25.39■■□□□ 1.66
SORT1-203ENST00000471996 DGKZQ13574 1117 aa25.39■■□□□ 1.66
SORT1-203ENST00000471996 NGEFQ8N5V2 710 aa25.39■■□□□ 1.66
SORT1-203ENST00000471996 GLIS2Q9BZE0 524 aaPredicted RBP25.39■■□□□ 1.66
SORT1-203ENST00000471996 PGAP2Q9UHJ9 254 aa25.39■■□□□ 1.66
SORT1-203ENST00000471996 IBTKQ9P2D0 1353 aaPredicted RBP25.39■■□□□ 1.65
SORT1-203ENST00000471996 MAP3K15Q6ZN16 1313 aa25.38■■□□□ 1.65
SORT1-203ENST00000471996 CXCL9Q07325 125 aa25.38■■□□□ 1.65
SORT1-203ENST00000471996 CNGB1Q14028 1251 aaPredicted RBP25.38■■□□□ 1.65
SORT1-203ENST00000471996 DCTN1Q14203 1278 aa25.38■■□□□ 1.65
SORT1-203ENST00000471996 AOC3Q16853 763 aa25.38■■□□□ 1.65
SORT1-203ENST00000471996 HTATSF1O43719 755 aaKnown RBP25.37■■□□□ 1.65
SORT1-203ENST00000471996 CIAPIN1Q6FI81 312 aa25.37■■□□□ 1.65
SORT1-203ENST00000471996 ZNRF3Q9ULT6 936 aa25.37■■□□□ 1.65
SORT1-203ENST00000471996 UBN2Q6ZU65 1347 aa25.37■■□□□ 1.65
SORT1-203ENST00000471996 GPTP24298 496 aa25.36■■□□□ 1.65
SORT1-203ENST00000471996 TAF7Q15545 349 aaPredicted RBP25.36■■□□□ 1.65
SORT1-203ENST00000471996 SUSD4Q5VX71 490 aa25.36■■□□□ 1.65
SORT1-203ENST00000471996 GMPSP49915 693 aaPredicted RBP25.35■■□□□ 1.65
SORT1-203ENST00000471996 KIF6Q6ZMV9 814 aa25.35■■□□□ 1.65
SORT1-203ENST00000471996 TTLL7Q6ZT98 887 aa25.35■■□□□ 1.65
SORT1-203ENST00000471996 ZC3H15Q8WU90 426 aaKnown RBP25.35■■□□□ 1.65
SORT1-203ENST00000471996 CFAP53Q96M91 514 aa25.35■■□□□ 1.65
SORT1-203ENST00000471996 TMX4Q9H1E5 349 aaPredicted RBP25.35■■□□□ 1.65
SORT1-203ENST00000471996 C3orf67Q6ZVT6 689 aa25.34■■□□□ 1.65
SORT1-203ENST00000471996 ZNF408Q9H9D4 720 aa25.34■■□□□ 1.65
SORT1-203ENST00000471996 MIS18AQ9NYP9 233 aa25.34■■□□□ 1.65
SORT1-203ENST00000471996 NUDCQ9Y266 331 aa25.34■■□□□ 1.65
SORT1-203ENST00000471996 ATP6V0A2Q9Y487 856 aa25.34■■□□□ 1.65
SORT1-203ENST00000471996 NOGQ13253 232 aa25.33■■□□□ 1.65
SORT1-203ENST00000471996 ZNF34Q8IZ26 560 aa25.33■■□□□ 1.65
SORT1-203ENST00000471996 SUPT20HQ8NEM7 779 aa25.33■■□□□ 1.65
SORT1-203ENST00000471996 RTFDC1Q9BY42 306 aaPredicted RBP25.33■■□□□ 1.65
SORT1-203ENST00000471996 CDHR2Q9BYE9 1310 aa25.33■■□□□ 1.64
SORT1-203ENST00000471996 NTSR2O95665 410 aa25.32■■□□□ 1.64
SORT1-203ENST00000471996 HIRAP54198 1017 aaPredicted RBP25.32■■□□□ 1.64
SORT1-203ENST00000471996 CDC37L1Q7L3B6 337 aa25.32■■□□□ 1.64
SORT1-203ENST00000471996 RRP7AQ9Y3A4 280 aaKnown RBP25.32■■□□□ 1.64
SORT1-203ENST00000471996 CASP8AP2Q9UKL3 1982 aa25.31■■□□□ 1.64
SORT1-203ENST00000471996 U2AF1L5P0DN76 240 aaPredicted RBP25.31■■□□□ 1.64
SORT1-203ENST00000471996 U2AF1Q01081 240 aaKnown RBP eCLIP25.31■■□□□ 1.64
SORT1-203ENST00000471996 NLRP3Q96P20 1036 aa25.31■■□□□ 1.64
SORT1-203ENST00000471996 ZIC5Q96T25 663 aa25.31■■□□□ 1.64
SORT1-203ENST00000471996 ZBTB3Q9H5J0 574 aa25.31■■□□□ 1.64
SORT1-203ENST00000471996 TRPM4Q8TD43 1214 aa25.29■■□□□ 1.64
SORT1-203ENST00000471996 BCL2L13Q9BXK5 485 aa25.29■■□□□ 1.64
SORT1-203ENST00000471996 MYL6BP14649 208 aa25.28■■□□□ 1.64
SORT1-203ENST00000471996 PPP1R42Q7Z4L9 355 aa25.28■■□□□ 1.64
SORT1-203ENST00000471996 TNRC18O15417 2968 aaPredicted RBP25.27■■□□□ 1.64
SORT1-203ENST00000471996 LAMB4A4D0S4 1761 aa25.27■■□□□ 1.64
SORT1-203ENST00000471996 HUNKP57058 714 aa25.27■■□□□ 1.64
SORT1-203ENST00000471996 KIAA2012Q0VF49 1180 aa25.27■■□□□ 1.64
SORT1-203ENST00000471996 TNIP1Q15025 636 aa25.27■■□□□ 1.64
SORT1-203ENST00000471996 SLC10A5Q5PT55 438 aa25.27■■□□□ 1.64
SORT1-203ENST00000471996 GIGYF2Q6Y7W6 1299 aaKnown RBP25.27■■□□□ 1.64
SORT1-203ENST00000471996 NUP98P52948 1817 aa25.27■■□□□ 1.64
SORT1-203ENST00000471996 RAD17O75943 681 aa25.26■■□□□ 1.63
SORT1-203ENST00000471996 PARP10Q53GL7 1025 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms