RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 COPRSQ9NQ92 184 aa21.03■□□□□ 0.96
RRP1-202ENST00000471909 TLR7Q9NYK1 1049 aaKnown RBP21.03■□□□□ 0.96
RRP1-202ENST00000471909 TMOD3Q9NYL9 352 aa21.03■□□□□ 0.96
RRP1-202ENST00000471909 CWC27Q6UX04 472 aaKnown RBP21.03■□□□□ 0.96
RRP1-202ENST00000471909 HSPA4P34932 840 aa21.02■□□□□ 0.96
RRP1-202ENST00000471909 PTPN12Q05209 780 aaKnown RBP21.02■□□□□ 0.96
RRP1-202ENST00000471909 AK9Q5TCS8 1911 aa21.02■□□□□ 0.96
RRP1-202ENST00000471909 TOGARAM1Q9Y4F4 1720 aa21.02■□□□□ 0.96
RRP1-202ENST00000471909 AFDNP55196 1824 aaKnown RBP21.01■□□□□ 0.95
RRP1-202ENST00000471909 LSG1Q9H089 658 aaKnown RBP21.01■□□□□ 0.95
RRP1-202ENST00000471909 RAD50Q92878 1312 aa21.01■□□□□ 0.95
RRP1-202ENST00000471909 H7C1W4 665 aa21.01■□□□□ 0.95
RRP1-202ENST00000471909 SSFA2P28290 1259 aa21.01■□□□□ 0.95
RRP1-202ENST00000471909 PIGBQ92521 554 aa21■□□□□ 0.95
RRP1-202ENST00000471909 ZBTB3Q9H5J0 574 aa21■□□□□ 0.95
RRP1-202ENST00000471909 CCDC173Q0VFZ6 552 aa21■□□□□ 0.95
RRP1-202ENST00000471909 EVI5LQ96CN4 794 aa21■□□□□ 0.95
RRP1-202ENST00000471909 ASAP1Q9ULH1 1129 aa21■□□□□ 0.95
RRP1-202ENST00000471909 ZGPATQ8N5A5 531 aaKnown RBP20.99■□□□□ 0.95
RRP1-202ENST00000471909 DIAPH3Q9NSV4 1193 aa20.99■□□□□ 0.95
RRP1-202ENST00000471909 CWC25Q9NXE8 425 aaPredicted RBP20.99■□□□□ 0.95
RRP1-202ENST00000471909 DISP2A7MBM2 1401 aa20.98■□□□□ 0.95
RRP1-202ENST00000471909 FOXO4P98177 505 aa20.98■□□□□ 0.95
RRP1-202ENST00000471909 NASPP49321 788 aaPredicted RBP20.98■□□□□ 0.95
RRP1-202ENST00000471909 LMBR1LQ6UX01 489 aa20.98■□□□□ 0.95
RRP1-202ENST00000471909 CLEC17AQ6ZS10 378 aa20.98■□□□□ 0.95
RRP1-202ENST00000471909 ANP32BQ92688 251 aaKnown RBP20.98■□□□□ 0.95
RRP1-202ENST00000471909 TMX3Q96JJ7 454 aa20.98■□□□□ 0.95
RRP1-202ENST00000471909 ROBO1Q9Y6N7 1651 aa20.97■□□□□ 0.95
RRP1-202ENST00000471909 MCM2P49736 904 aa20.97■□□□□ 0.95
RRP1-202ENST00000471909 UPF3BQ9BZI7 483 aaKnown RBP20.97■□□□□ 0.95
RRP1-202ENST00000471909 CWC22Q9HCG8 908 aaKnown RBP20.97■□□□□ 0.95
RRP1-202ENST00000471909 NUP188Q5SRE5 1749 aa20.97■□□□□ 0.95
RRP1-202ENST00000471909 TFCP2Q12800 502 aa20.97■□□□□ 0.95
RRP1-202ENST00000471909 KLHL40Q2TBA0 621 aa20.97■□□□□ 0.95
RRP1-202ENST00000471909 KIAA1211Q6ZU35 1233 aa20.97■□□□□ 0.95
RRP1-202ENST00000471909 ATG3Q9NT62 314 aa20.97■□□□□ 0.95
RRP1-202ENST00000471909 DDX49Q9Y6V7 483 aaKnown RBP20.97■□□□□ 0.95
RRP1-202ENST00000471909 RUFY2Q8WXA3 655 aa20.96■□□□□ 0.95
RRP1-202ENST00000471909 BOLA2Q9H3K6 86 aa20.96■□□□□ 0.95
RRP1-202ENST00000471909 COL14A1Q05707 1796 aaKnown RBP20.96■□□□□ 0.95
RRP1-202ENST00000471909 CCDC191Q8NCU4 936 aa20.96■□□□□ 0.95
RRP1-202ENST00000471909 PPP1R9BQ96SB3 815 aa20.96■□□□□ 0.95
RRP1-202ENST00000471909 BAG4O95429 457 aaKnown RBP20.95■□□□□ 0.94
RRP1-202ENST00000471909 CYP2E1P05181 493 aaPredicted RBP20.95■□□□□ 0.94
RRP1-202ENST00000471909 DNAJC10Q8IXB1 793 aa20.95■□□□□ 0.94
RRP1-202ENST00000471909 PKP1Q13835 747 aa20.95■□□□□ 0.94
RRP1-202ENST00000471909 TNNI3KQ59H18 835 aa20.95■□□□□ 0.94
RRP1-202ENST00000471909 SNX14Q9Y5W7 946 aa20.95■□□□□ 0.94
RRP1-202ENST00000471909 FPGT-TNNI3KV9GXZ4 949 aa20.95■□□□□ 0.94
RRP1-202ENST00000471909 TPM2P07951 284 aa20.94■□□□□ 0.94
RRP1-202ENST00000471909 NUCB2P80303 420 aa20.94■□□□□ 0.94
RRP1-202ENST00000471909 RASEFQ8IZ41 740 aa20.94■□□□□ 0.94
RRP1-202ENST00000471909 VSIG10Q8N0Z9 540 aa20.94■□□□□ 0.94
RRP1-202ENST00000471909 DBNLQ9UJU6 430 aaKnown RBP20.94■□□□□ 0.94
RRP1-202ENST00000471909 AHDC1Q5TGY3 1603 aaPredicted RBP20.94■□□□□ 0.94
RRP1-202ENST00000471909 PTH1RQ03431 593 aa20.93■□□□□ 0.94
RRP1-202ENST00000471909 TEX13AQ9BXU3 409 aaPredicted RBP20.93■□□□□ 0.94
RRP1-202ENST00000471909 CHMP3Q9Y3E7 222 aa20.93■□□□□ 0.94
RRP1-202ENST00000471909 ZNF330Q9Y3S2 320 aaPredicted RBP20.93■□□□□ 0.94
RRP1-202ENST00000471909 COL16A1Q07092 1604 aaPredicted RBP20.92■□□□□ 0.94
RRP1-202ENST00000471909 CUL4AQ13619 759 aa20.92■□□□□ 0.94
RRP1-202ENST00000471909 NOL8Q76FK4 1167 aaKnown RBP20.92■□□□□ 0.94
RRP1-202ENST00000471909 FAM227BQ96M60 508 aa20.92■□□□□ 0.94
RRP1-202ENST00000471909 TJP1Q07157 1748 aa20.92■□□□□ 0.94
RRP1-202ENST00000471909 ISCA1Q9BUE6 129 aa20.92■□□□□ 0.94
RRP1-202ENST00000471909 COL22A1Q8NFW1 1626 aaPredicted RBP20.92■□□□□ 0.94
RRP1-202ENST00000471909 NMIQ13287 307 aaPredicted RBP20.91■□□□□ 0.94
RRP1-202ENST00000471909 ZSCAN30Q86W11 494 aa20.91■□□□□ 0.94
RRP1-202ENST00000471909 HIP1O00291 1037 aa20.91■□□□□ 0.94
RRP1-202ENST00000471909 BCL9O00512 1426 aa20.9■□□□□ 0.94
RRP1-202ENST00000471909 EXOC5O00471 708 aa20.9■□□□□ 0.94
RRP1-202ENST00000471909 ATP5JP18859 108 aa20.9■□□□□ 0.94
RRP1-202ENST00000471909 TCIRG1Q13488 830 aa20.9■□□□□ 0.94
RRP1-202ENST00000471909 FSD1Q9BTV5 496 aa20.9■□□□□ 0.94
RRP1-202ENST00000471909 STARD3NLO95772 234 aa20.89■□□□□ 0.94
RRP1-202ENST00000471909 ATG9AQ7Z3C6 839 aa20.89■□□□□ 0.94
RRP1-202ENST00000471909 ZDHHC9Q9Y397 364 aa20.89■□□□□ 0.94
RRP1-202ENST00000471909 EDC3Q96F86 508 aaKnown RBP20.89■□□□□ 0.93
RRP1-202ENST00000471909 SLC4A9Q96Q91 983 aa20.89■□□□□ 0.93
RRP1-202ENST00000471909 DBNDD2Q9BQY9 259 aa20.89■□□□□ 0.93
RRP1-202ENST00000471909 SNRKQ9NRH2 765 aa20.88■□□□□ 0.93
RRP1-202ENST00000471909 A0A0D9SFI3 127 aa20.88■□□□□ 0.93
RRP1-202ENST00000471909 MCTP1Q6DN14 999 aa20.88■□□□□ 0.93
RRP1-202ENST00000471909 TTC14Q96N46 770 aa20.88■□□□□ 0.93
RRP1-202ENST00000471909 CCDC171Q6TFL3 1326 aa20.88■□□□□ 0.93
RRP1-202ENST00000471909 MSNP26038 577 aaKnown RBP20.87■□□□□ 0.93
RRP1-202ENST00000471909 INTS4Q96HW7 963 aaKnown RBP20.87■□□□□ 0.93
RRP1-202ENST00000471909 ITGB4P16144 1822 aa20.87■□□□□ 0.93
RRP1-202ENST00000471909 ZNF445P59923 1031 aa20.87■□□□□ 0.93
RRP1-202ENST00000471909 TRIM28Q13263 835 aaKnown RBP20.87■□□□□ 0.93
RRP1-202ENST00000471909 NECTIN1Q15223 517 aa20.86■□□□□ 0.93
RRP1-202ENST00000471909 PRPF40BQ6NWY9 871 aaKnown RBP20.86■□□□□ 0.93
RRP1-202ENST00000471909 KIF6Q6ZMV9 814 aa20.86■□□□□ 0.93
RRP1-202ENST00000471909 KCNB2Q92953 911 aa20.86■□□□□ 0.93
RRP1-202ENST00000471909 SYTL4Q96C24 671 aaPredicted RBP20.86■□□□□ 0.93
RRP1-202ENST00000471909 PLCH1Q4KWH8 1693 aa20.86■□□□□ 0.93
RRP1-202ENST00000471909 LTBP4Q8N2S1 1624 aa20.86■□□□□ 0.93
RRP1-202ENST00000471909 ADAMTS2O95450 1211 aa20.85■□□□□ 0.93
RRP1-202ENST00000471909 NCLP19338 710 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms