RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 H7C1W4 665 aa12.78□□□□□ -0.36
APLF-204ENST00000471727 RFX5P48382 616 aaPredicted RBP12.78□□□□□ -0.36
APLF-204ENST00000471727 PKP1Q13835 747 aa12.78□□□□□ -0.36
APLF-204ENST00000471727 NECTIN1Q15223 517 aa12.78□□□□□ -0.36
APLF-204ENST00000471727 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
APLF-204ENST00000471727 ANP32BQ92688 251 aaKnown RBP12.78□□□□□ -0.36
APLF-204ENST00000471727 MAP4K1Q92918 833 aa12.78□□□□□ -0.36
APLF-204ENST00000471727 TEX13AQ9BXU3 409 aaPredicted RBP12.78□□□□□ -0.36
APLF-204ENST00000471727 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
APLF-204ENST00000471727 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
APLF-204ENST00000471727 GPR108Q9NPR9 543 aa12.78□□□□□ -0.36
APLF-204ENST00000471727 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
APLF-204ENST00000471727 PRPF40AO75400 957 aaKnown RBP12.77□□□□□ -0.36
APLF-204ENST00000471727 PTPN12Q05209 780 aaKnown RBP12.77□□□□□ -0.36
APLF-204ENST00000471727 ALDH8A1Q9H2A2 487 aaPredicted RBP12.77□□□□□ -0.36
APLF-204ENST00000471727 HMG20BQ9P0W2 317 aa12.77□□□□□ -0.36
APLF-204ENST00000471727 ATP6V1DQ9Y5K8 247 aa12.77□□□□□ -0.36
APLF-204ENST00000471727 COL5A2P05997 1499 aaPredicted RBP12.77□□□□□ -0.37
APLF-204ENST00000471727 NCLP19338 710 aaKnown RBP12.77□□□□□ -0.37
APLF-204ENST00000471727 AK2P54819 239 aa12.77□□□□□ -0.37
APLF-204ENST00000471727 CASP7P55210 303 aa12.77□□□□□ -0.37
APLF-204ENST00000471727 ANKRD1Q15327 319 aa12.77□□□□□ -0.37
APLF-204ENST00000471727 TNNI3KQ59H18 835 aa12.77□□□□□ -0.37
APLF-204ENST00000471727 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
APLF-204ENST00000471727 CCDC191Q8NCU4 936 aa12.77□□□□□ -0.37
APLF-204ENST00000471727 SYAP1Q96A49 352 aaPredicted RBP12.77□□□□□ -0.37
APLF-204ENST00000471727 ATG3Q9NT62 314 aa12.77□□□□□ -0.37
APLF-204ENST00000471727 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.37
APLF-204ENST00000471727 FPGT-TNNI3KV9GXZ4 949 aa12.77□□□□□ -0.37
APLF-204ENST00000471727 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
APLF-204ENST00000471727 KCNJ4P48050 445 aa12.76□□□□□ -0.37
APLF-204ENST00000471727 HSPA2P54652 639 aa12.76□□□□□ -0.37
APLF-204ENST00000471727 TSGA10IPQ3SY00 556 aa12.76□□□□□ -0.37
APLF-204ENST00000471727 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
APLF-204ENST00000471727 UBE3BQ7Z3V4 1068 aa12.76□□□□□ -0.37
APLF-204ENST00000471727 FSD1Q9BTV5 496 aa12.76□□□□□ -0.37
APLF-204ENST00000471727 SIL1Q9H173 461 aa12.76□□□□□ -0.37
APLF-204ENST00000471727 PDRG1Q9NUG6 133 aa12.76□□□□□ -0.37
APLF-204ENST00000471727 CASTP20810 708 aaKnown RBP12.75□□□□□ -0.37
APLF-204ENST00000471727 PTH1RQ03431 593 aa12.75□□□□□ -0.37
APLF-204ENST00000471727 NMIQ13287 307 aaPredicted RBP12.75□□□□□ -0.37
APLF-204ENST00000471727 KRT32Q14532 448 aa12.75□□□□□ -0.37
APLF-204ENST00000471727 CREB3L3Q68CJ9 461 aa12.75□□□□□ -0.37
APLF-204ENST00000471727 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
APLF-204ENST00000471727 RUFY3Q7L099 469 aa12.75□□□□□ -0.37
APLF-204ENST00000471727 VSIG10Q8N0Z9 540 aa12.75□□□□□ -0.37
APLF-204ENST00000471727 BOLA2Q9H3K6 86 aa12.75□□□□□ -0.37
APLF-204ENST00000471727 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
APLF-204ENST00000471727 SMC3Q9UQE7 1217 aa12.75□□□□□ -0.37
APLF-204ENST00000471727 RBM8AQ9Y5S9 174 aaKnown RBP12.75□□□□□ -0.37
APLF-204ENST00000471727 EVA1CP58658 441 aa12.74□□□□□ -0.37
APLF-204ENST00000471727 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
APLF-204ENST00000471727 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
APLF-204ENST00000471727 CAVIN1Q6NZI2 390 aaKnown RBP12.74□□□□□ -0.37
APLF-204ENST00000471727 GAS2L3Q86XJ1 694 aa12.74□□□□□ -0.37
APLF-204ENST00000471727 JAKMIP1Q96N16 626 aaKnown RBP12.74□□□□□ -0.37
APLF-204ENST00000471727 TNS2Q63HR2 1409 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 IL15P40933 162 aaPredicted RBP12.73□□□□□ -0.37
APLF-204ENST00000471727 CCDC173Q0VFZ6 552 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 TRIM28Q13263 835 aaKnown RBP12.73□□□□□ -0.37
APLF-204ENST00000471727 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 NBPF10Q6P3W6 841 aaKnown RBP12.73□□□□□ -0.37
APLF-204ENST00000471727 NBPF15Q8N660 670 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 TMEM87AQ8NBN3 555 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 JCADQ9P266 1359 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 MED23Q9ULK4 1368 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 ATP5J2-PTCD1G3V325 749 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
APLF-204ENST00000471727 CIAO1O76071 339 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 PHF14O94880 888 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 ZSCAN22P10073 491 aaPredicted RBP12.73□□□□□ -0.37
APLF-204ENST00000471727 TFCP2Q12800 502 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 LMBR1LQ6UX01 489 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 NOL8Q76FK4 1167 aaKnown RBP12.73□□□□□ -0.37
APLF-204ENST00000471727 HAUS7Q99871 368 aa12.73□□□□□ -0.37
APLF-204ENST00000471727 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
APLF-204ENST00000471727 GLI3P10071 1580 aa12.72□□□□□ -0.37
APLF-204ENST00000471727 SLC27A2O14975 620 aa12.72□□□□□ -0.37
APLF-204ENST00000471727 NASPP49321 788 aaPredicted RBP12.72□□□□□ -0.37
APLF-204ENST00000471727 FOXO4P98177 505 aa12.72□□□□□ -0.37
APLF-204ENST00000471727 USPL1Q5W0Q7 1092 aa12.72□□□□□ -0.37
APLF-204ENST00000471727 GPT2Q8TD30 523 aa12.72□□□□□ -0.37
APLF-204ENST00000471727 TRIM44Q96DX7 344 aaPredicted RBP12.72□□□□□ -0.37
APLF-204ENST00000471727 FAM227BQ96M60 508 aa12.72□□□□□ -0.37
APLF-204ENST00000471727 PANK2Q9BZ23 570 aa12.72□□□□□ -0.37
APLF-204ENST00000471727 TLR7Q9NYK1 1049 aaKnown RBP12.72□□□□□ -0.37
APLF-204ENST00000471727 DBNLQ9UJU6 430 aaKnown RBP12.72□□□□□ -0.37
APLF-204ENST00000471727 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
APLF-204ENST00000471727 RPAP1Q9BWH6 1393 aaPredicted RBP12.72□□□□□ -0.37
APLF-204ENST00000471727 KCPQ6ZWJ8 1503 aa12.71□□□□□ -0.37
APLF-204ENST00000471727 STX6O43752 255 aa12.71□□□□□ -0.37
APLF-204ENST00000471727 PDCP20941 246 aa12.71□□□□□ -0.37
APLF-204ENST00000471727 LRRFIP1Q32MZ4 808 aaKnown RBP12.71□□□□□ -0.37
APLF-204ENST00000471727 BLOC1S2Q6QNY1 142 aa12.71□□□□□ -0.37
APLF-204ENST00000471727 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.37
APLF-204ENST00000471727 KLHDC4Q8TBB5 520 aa12.71□□□□□ -0.37
APLF-204ENST00000471727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.71□□□□□ -0.37
APLF-204ENST00000471727 ARXQ96QS3 562 aa12.71□□□□□ -0.37
APLF-204ENST00000471727 PPP1R9BQ96SB3 815 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms