RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 CACNA1SQ13698 1873 aa19.48■□□□□ 0.71
VPS8-221ENST00000471655 CCDC184Q52MB2 194 aa19.47■□□□□ 0.71
VPS8-221ENST00000471655 SLC10A5Q5PT55 438 aa19.47■□□□□ 0.71
VPS8-221ENST00000471655 DUSP27Q5VZP5 1158 aa19.47■□□□□ 0.71
VPS8-221ENST00000471655 TIAM2Q8IVF5 1701 aa19.46■□□□□ 0.71
VPS8-221ENST00000471655 AIMP1Q12904 312 aaKnown RBP19.46■□□□□ 0.71
VPS8-221ENST00000471655 TCIRG1Q13488 830 aa19.46■□□□□ 0.71
VPS8-221ENST00000471655 DPY19L2Q6NUT2 758 aa19.46■□□□□ 0.71
VPS8-221ENST00000471655 C16orf71Q8IYS4 520 aaPredicted RBP19.46■□□□□ 0.71
VPS8-221ENST00000471655 RTKN2Q8IZC4 609 aa19.46■□□□□ 0.71
VPS8-221ENST00000471655 UTP14AQ9BVJ6 771 aaKnown RBP19.46■□□□□ 0.71
VPS8-221ENST00000471655 CHPF2Q9P2E5 772 aa19.46■□□□□ 0.71
VPS8-221ENST00000471655 NCBP3Q53F19 620 aaKnown RBP19.45■□□□□ 0.7
VPS8-221ENST00000471655 CRAMP1Q96RY5 1269 aa19.45■□□□□ 0.7
VPS8-221ENST00000471655 HYPKQ9NX55 129 aa19.45■□□□□ 0.7
VPS8-221ENST00000471655 ANP32CO43423 234 aa19.44■□□□□ 0.7
VPS8-221ENST00000471655 VEGFAP15692 232 aaPredicted RBP19.44■□□□□ 0.7
VPS8-221ENST00000471655 FKBP4Q02790 459 aaKnown RBP eCLIP19.44■□□□□ 0.7
VPS8-221ENST00000471655 FSTL1Q12841 308 aa19.44■□□□□ 0.7
VPS8-221ENST00000471655 CCDC27Q2M243 656 aa19.44■□□□□ 0.7
VPS8-221ENST00000471655 CC2D2BQ6DHV5 1058 aa19.44■□□□□ 0.7
VPS8-221ENST00000471655 PLBD2Q8NHP8 589 aa19.44■□□□□ 0.7
VPS8-221ENST00000471655 RPGRQ92834 1020 aaKnown RBP19.44■□□□□ 0.7
VPS8-221ENST00000471655 NLRP3Q96P20 1036 aa19.44■□□□□ 0.7
VPS8-221ENST00000471655 ANKRD36CQ5JPF3 1778 aa19.44■□□□□ 0.7
VPS8-221ENST00000471655 GRIPAP1Q4V328 841 aa19.43■□□□□ 0.7
VPS8-221ENST00000471655 NLRP10Q86W26 655 aa19.43■□□□□ 0.7
VPS8-221ENST00000471655 RBM17Q96I25 401 aaKnown RBP19.43■□□□□ 0.7
VPS8-221ENST00000471655 ANKRD13DQ6ZTN6 518 aa19.42■□□□□ 0.7
VPS8-221ENST00000471655 CHMP4AQ9BY43 222 aa19.42■□□□□ 0.7
VPS8-221ENST00000471655 WDR90Q96KV7 1748 aa19.42■□□□□ 0.7
VPS8-221ENST00000471655 SNED1Q8TER0 1413 aa19.42■□□□□ 0.7
VPS8-221ENST00000471655 PSMD1Q99460 953 aa19.41■□□□□ 0.7
VPS8-221ENST00000471655 POTECB2RU33 542 aa19.4■□□□□ 0.7
VPS8-221ENST00000471655 APLP1P51693 650 aa19.4■□□□□ 0.7
VPS8-221ENST00000471655 OLFM4Q6UX06 510 aa19.4■□□□□ 0.7
VPS8-221ENST00000471655 MRS2Q9HD23 443 aa19.4■□□□□ 0.7
VPS8-221ENST00000471655 C3orf67Q6ZVT6 689 aa19.39■□□□□ 0.69
VPS8-221ENST00000471655 ISCA1Q9BUE6 129 aa19.39■□□□□ 0.69
VPS8-221ENST00000471655 TRMT112Q9UI30 125 aaKnown RBP19.39■□□□□ 0.69
VPS8-221ENST00000471655 TRIM28Q13263 835 aaKnown RBP19.38■□□□□ 0.69
VPS8-221ENST00000471655 WWC1Q8IX03 1113 aa19.38■□□□□ 0.69
VPS8-221ENST00000471655 SYNE4Q8N205 404 aa19.38■□□□□ 0.69
VPS8-221ENST00000471655 C8orf58Q8NAV2 365 aa19.38■□□□□ 0.69
VPS8-221ENST00000471655 SMC1BQ8NDV3 1235 aa19.38■□□□□ 0.69
VPS8-221ENST00000471655 SH3TC1Q8TE82 1336 aa19.38■□□□□ 0.69
VPS8-221ENST00000471655 ZNF277Q9NRM2 450 aaPredicted RBP19.38■□□□□ 0.69
VPS8-221ENST00000471655 CEP350Q5VT06 3117 aa19.37■□□□□ 0.69
VPS8-221ENST00000471655 IARSP41252 1262 aaKnown RBP19.37■□□□□ 0.69
VPS8-221ENST00000471655 IL16Q14005 1332 aa19.36■□□□□ 0.69
VPS8-221ENST00000471655 ELL2O00472 640 aaPredicted RBP19.36■□□□□ 0.69
VPS8-221ENST00000471655 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
VPS8-221ENST00000471655 DDNO94850 711 aaPredicted RBP19.36■□□□□ 0.69
VPS8-221ENST00000471655 BBOX1O75936 387 aa19.35■□□□□ 0.69
VPS8-221ENST00000471655 HCLS1P14317 486 aaPredicted RBP19.35■□□□□ 0.69
VPS8-221ENST00000471655 CCDC30Q5VVM6 783 aa19.35■□□□□ 0.69
VPS8-221ENST00000471655 L3MBTL3Q96JM7 780 aaPredicted RBP19.35■□□□□ 0.69
VPS8-221ENST00000471655 ATP6V0A2Q9Y487 856 aa19.35■□□□□ 0.69
VPS8-221ENST00000471655 FZD9O00144 591 aa19.34■□□□□ 0.69
VPS8-221ENST00000471655 GOLGA2Q08379 1002 aa19.34■□□□□ 0.69
VPS8-221ENST00000471655 PHAXQ9H814 394 aaKnown RBP19.34■□□□□ 0.69
VPS8-221ENST00000471655 ABCC4O15439 1325 aa19.33■□□□□ 0.69
VPS8-221ENST00000471655 RIC3Q7Z5B4 369 aa19.33■□□□□ 0.68
VPS8-221ENST00000471655 TMX4Q9H1E5 349 aaPredicted RBP19.33■□□□□ 0.68
VPS8-221ENST00000471655 VPS33BQ9H267 617 aa19.33■□□□□ 0.68
VPS8-221ENST00000471655 LAMB2P55268 1798 aa19.33■□□□□ 0.68
VPS8-221ENST00000471655 IQCA1LA6NCM1 817 aa19.32■□□□□ 0.68
VPS8-221ENST00000471655 ATP5J2-PTCD1G3V325 749 aa19.32■□□□□ 0.68
VPS8-221ENST00000471655 DDX46Q7L014 1031 aaKnown RBP19.32■□□□□ 0.68
VPS8-221ENST00000471655 SP8Q8IXZ3 490 aa19.32■□□□□ 0.68
VPS8-221ENST00000471655 TSPYL6Q8N831 410 aa19.32■□□□□ 0.68
VPS8-221ENST00000471655 JDP2Q8WYK2 163 aa19.32■□□□□ 0.68
VPS8-221ENST00000471655 TSR2Q969E8 191 aaKnown RBP19.32■□□□□ 0.68
VPS8-221ENST00000471655 SF3B3Q15393 1217 aaKnown RBP19.31■□□□□ 0.68
VPS8-221ENST00000471655 TMC4Q7Z404 712 aa19.31■□□□□ 0.68
VPS8-221ENST00000471655 WDR63Q8IWG1 891 aa19.31■□□□□ 0.68
VPS8-221ENST00000471655 DNAJC5GQ8N7S2 189 aa19.31■□□□□ 0.68
VPS8-221ENST00000471655 FAM89AQ96GI7 184 aa19.31■□□□□ 0.68
VPS8-221ENST00000471655 RTFDC1Q9BY42 306 aaPredicted RBP19.31■□□□□ 0.68
VPS8-221ENST00000471655 SCN4AP35499 1836 aa19.3■□□□□ 0.68
VPS8-221ENST00000471655 ZNF541Q9H0D2 1346 aa19.3■□□□□ 0.68
VPS8-221ENST00000471655 DDX58O95786 925 aaKnown RBP19.3■□□□□ 0.68
VPS8-221ENST00000471655 GRAPQ13588 217 aa19.3■□□□□ 0.68
VPS8-221ENST00000471655 GRAPLQ8TC17 118 aaPredicted RBP19.3■□□□□ 0.68
VPS8-221ENST00000471655 DDX60Q8IY21 1712 aaKnown RBP19.29■□□□□ 0.68
VPS8-221ENST00000471655 TCERG1O14776 1098 aaKnown RBP19.29■□□□□ 0.68
VPS8-221ENST00000471655 HSP90B1P14625 803 aaKnown RBP19.29■□□□□ 0.68
VPS8-221ENST00000471655 GPC2Q8N158 579 aa19.29■□□□□ 0.68
VPS8-221ENST00000471655 ZBTB38Q8NAP3 1195 aaPredicted RBP19.29■□□□□ 0.68
VPS8-221ENST00000471655 CCDC191Q8NCU4 936 aa19.29■□□□□ 0.68
VPS8-221ENST00000471655 SUPT20HQ8NEM7 779 aa19.29■□□□□ 0.68
VPS8-221ENST00000471655 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
VPS8-221ENST00000471655 LARGE2Q8N3Y3 721 aa19.28■□□□□ 0.68
VPS8-221ENST00000471655 METTL22Q9BUU2 404 aaPredicted RBP19.28■□□□□ 0.68
VPS8-221ENST00000471655 IRS4O14654 1257 aaPredicted RBP19.27■□□□□ 0.68
VPS8-221ENST00000471655 EIF6P56537 245 aaKnown RBP19.27■□□□□ 0.68
VPS8-221ENST00000471655 CHADLQ6NUI6 762 aa19.27■□□□□ 0.68
VPS8-221ENST00000471655 SLC51AQ86UW1 340 aa19.27■□□□□ 0.68
VPS8-221ENST00000471655 MYD88Q99836 296 aa19.27■□□□□ 0.68
VPS8-221ENST00000471655 STK31Q9BXU1 1019 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms