RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 ZNF428Q96B54 188 aa22.68■■□□□ 1.22
VPS72-204ENST00000471423 MYD88Q99836 296 aa22.68■■□□□ 1.22
VPS72-204ENST00000471423 ISCA1Q9BUE6 129 aa22.68■■□□□ 1.22
VPS72-204ENST00000471423 UTP14AQ9BVJ6 771 aaKnown RBP22.68■■□□□ 1.22
VPS72-204ENST00000471423 FKBP5Q13451 457 aaPredicted RBP22.67■■□□□ 1.22
VPS72-204ENST00000471423 C2CD5Q86YS7 1000 aa22.67■■□□□ 1.22
VPS72-204ENST00000471423 METTL22Q9BUU2 404 aaPredicted RBP22.67■■□□□ 1.22
VPS72-204ENST00000471423 H0YIN7 160 aa22.65■■□□□ 1.22
VPS72-204ENST00000471423 SSH1Q8WYL5 1049 aa22.65■■□□□ 1.22
VPS72-204ENST00000471423 PIM2Q9P1W9 311 aa22.65■■□□□ 1.22
VPS72-204ENST00000471423 TRMT112Q9UI30 125 aaKnown RBP22.65■■□□□ 1.22
VPS72-204ENST00000471423 RIC1Q4ADV7 1423 aa22.65■■□□□ 1.22
VPS72-204ENST00000471423 CT47B1P0C2W7 299 aaPredicted RBP22.64■■□□□ 1.21
VPS72-204ENST00000471423 BCL2L13Q9BXK5 485 aa22.64■■□□□ 1.21
VPS72-204ENST00000471423 BCS1LQ9Y276 419 aa22.64■■□□□ 1.21
VPS72-204ENST00000471423 RNF123Q5XPI4 1314 aa22.63■■□□□ 1.21
VPS72-204ENST00000471423 TRIM28Q13263 835 aaKnown RBP22.63■■□□□ 1.21
VPS72-204ENST00000471423 MRPL50Q8N5N7 158 aaKnown RBP22.63■■□□□ 1.21
VPS72-204ENST00000471423 PDZRN3Q9UPQ7 1066 aa22.63■■□□□ 1.21
VPS72-204ENST00000471423 SYNE4Q8N205 404 aa22.62■■□□□ 1.21
VPS72-204ENST00000471423 SH3TC1Q8TE82 1336 aa22.61■■□□□ 1.21
VPS72-204ENST00000471423 KLRG2A4D1S0 409 aaPredicted RBP22.61■■□□□ 1.21
VPS72-204ENST00000471423 SRGNP10124 158 aa22.61■■□□□ 1.21
VPS72-204ENST00000471423 NEXNQ0ZGT2 675 aa22.61■■□□□ 1.21
VPS72-204ENST00000471423 ALDH1L2Q3SY69 923 aa22.61■■□□□ 1.21
VPS72-204ENST00000471423 DALRD3Q5D0E6 543 aaKnown RBP22.61■■□□□ 1.21
VPS72-204ENST00000471423 DNAAF4Q8WXU2 420 aa22.61■■□□□ 1.21
VPS72-204ENST00000471423 ZNF622Q969S3 477 aaKnown RBP eCLIP22.61■■□□□ 1.212e-12■□□□□ 10.5
VPS72-204ENST00000471423 SMC4Q9NTJ3 1288 aa22.61■■□□□ 1.21
VPS72-204ENST00000471423 F6X3S4 739 aa22.6■■□□□ 1.21
VPS72-204ENST00000471423 IGKV5-2P06315 115 aa22.6■■□□□ 1.21
VPS72-204ENST00000471423 CCDC191Q8NCU4 936 aa22.6■■□□□ 1.21
VPS72-204ENST00000471423 FAM89AQ96GI7 184 aa22.6■■□□□ 1.21
VPS72-204ENST00000471423 CWC25Q9NXE8 425 aaPredicted RBP22.6■■□□□ 1.21
VPS72-204ENST00000471423 ARFGEF1Q9Y6D6 1849 aa22.59■■□□□ 1.21
VPS72-204ENST00000471423 GRIN3BO60391 1043 aa22.59■■□□□ 1.21
VPS72-204ENST00000471423 HCLS1P14317 486 aaPredicted RBP22.59■■□□□ 1.21
VPS72-204ENST00000471423 CWF19L2Q2TBE0 894 aaKnown RBP22.59■■□□□ 1.21
VPS72-204ENST00000471423 RTL5Q5HYW3 569 aaPredicted RBP22.59■■□□□ 1.21
VPS72-204ENST00000471423 C3orf67Q6ZVT6 689 aa22.59■■□□□ 1.21
VPS72-204ENST00000471423 TTLL6Q8N841 843 aa22.59■■□□□ 1.21
VPS72-204ENST00000471423 MASTLQ96GX5 879 aa22.59■■□□□ 1.21
VPS72-204ENST00000471423 DDX60Q8IY21 1712 aaKnown RBP22.59■■□□□ 1.21
VPS72-204ENST00000471423 STYK1Q6J9G0 422 aa22.58■■□□□ 1.21
VPS72-204ENST00000471423 CACNA1SQ13698 1873 aa22.58■■□□□ 1.2
VPS72-204ENST00000471423 NEURL1BA8MQ27 555 aa22.57■■□□□ 1.2
VPS72-204ENST00000471423 NPR1P16066 1061 aa22.57■■□□□ 1.2
VPS72-204ENST00000471423 RARSP54136 660 aaKnown RBP22.57■■□□□ 1.2
VPS72-204ENST00000471423 CRY2Q49AN0 593 aa22.57■■□□□ 1.2
VPS72-204ENST00000471423 SLC10A5Q5PT55 438 aa22.57■■□□□ 1.2
VPS72-204ENST00000471423 ZBTB38Q8NAP3 1195 aaPredicted RBP22.57■■□□□ 1.2
VPS72-204ENST00000471423 LAMB2P55268 1798 aa22.57■■□□□ 1.2
VPS72-204ENST00000471423 NLRP3Q96P20 1036 aa22.56■■□□□ 1.2
VPS72-204ENST00000471423 PTPRCP08575 1304 aa22.56■■□□□ 1.2
VPS72-204ENST00000471423 PCCAP05165 728 aaPredicted RBP22.55■■□□□ 1.2
VPS72-204ENST00000471423 LINS1Q8NG48 757 aa22.55■■□□□ 1.2
VPS72-204ENST00000471423 JARID2Q92833 1246 aaPredicted RBP22.55■■□□□ 1.2
VPS72-204ENST00000471423 CNKSR1Q969H4 720 aa22.55■■□□□ 1.2
VPS72-204ENST00000471423 PRPF40BQ6NWY9 871 aaKnown RBP22.54■■□□□ 1.2
VPS72-204ENST00000471423 RPGRQ92834 1020 aaKnown RBP22.54■■□□□ 1.2
VPS72-204ENST00000471423 SLX4Q8IY92 1834 aa22.54■■□□□ 1.2
VPS72-204ENST00000471423 IRS4O14654 1257 aaPredicted RBP22.53■■□□□ 1.2
VPS72-204ENST00000471423 BEND3Q5T5X7 828 aa22.53■■□□□ 1.2
VPS72-204ENST00000471423 SLC4A10Q6U841 1118 aa22.53■■□□□ 1.2
VPS72-204ENST00000471423 GCKRQ14397 625 aa22.52■■□□□ 1.2
VPS72-204ENST00000471423 ZNF219Q9P2Y4 722 aaPredicted RBP22.52■■□□□ 1.2
VPS72-204ENST00000471423 HOXA10P31260 410 aaPredicted RBP22.51■■□□□ 1.19
VPS72-204ENST00000471423 BRPF1P55201 1214 aaPredicted RBP22.51■■□□□ 1.19
VPS72-204ENST00000471423 RBM17Q96I25 401 aaKnown RBP22.51■■□□□ 1.19
VPS72-204ENST00000471423 ALDH1B1P30837 517 aa22.5■■□□□ 1.19
VPS72-204ENST00000471423 ARHGAP27Q6ZUM4 889 aa22.5■■□□□ 1.19
VPS72-204ENST00000471423 UBE3BQ7Z3V4 1068 aa22.5■■□□□ 1.19
VPS72-204ENST00000471423 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
VPS72-204ENST00000471423 NOB1Q9ULX3 412 aaKnown RBP22.5■■□□□ 1.19
VPS72-204ENST00000471423 KIF16BQ96L93 1317 aa22.5■■□□□ 1.19
VPS72-204ENST00000471423 CDHR2Q9BYE9 1310 aa22.5■■□□□ 1.19
VPS72-204ENST00000471423 C21orf2O43822 256 aa22.49■■□□□ 1.19
VPS72-204ENST00000471423 SRCIN1Q9C0H9 1055 aa22.49■■□□□ 1.19
VPS72-204ENST00000471423 CHD4Q14839 1912 aa22.49■■□□□ 1.19
VPS72-204ENST00000471423 H7C1W4 665 aa22.48■■□□□ 1.19
VPS72-204ENST00000471423 BCAR3O75815 825 aa22.48■■□□□ 1.19
VPS72-204ENST00000471423 HSP90B1P14625 803 aaKnown RBP22.48■■□□□ 1.19
VPS72-204ENST00000471423 CRAMP1Q96RY5 1269 aa22.48■■□□□ 1.19
VPS72-204ENST00000471423 ABCC4O15439 1325 aa22.48■■□□□ 1.19
VPS72-204ENST00000471423 ALDH1L1O75891 902 aa22.47■■□□□ 1.19
VPS72-204ENST00000471423 PDE8AO60658 829 aa22.46■■□□□ 1.19
VPS72-204ENST00000471423 SF3B3Q15393 1217 aaKnown RBP22.46■■□□□ 1.19
VPS72-204ENST00000471423 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
VPS72-204ENST00000471423 C7orf43Q8WVR3 580 aa22.46■■□□□ 1.19
VPS72-204ENST00000471423 CASP7P55210 303 aa22.45■■□□□ 1.18
VPS72-204ENST00000471423 OLFM4Q6UX06 510 aa22.45■■□□□ 1.18
VPS72-204ENST00000471423 API5Q9BZZ5 524 aaKnown RBP22.45■■□□□ 1.18
VPS72-204ENST00000471423 PPEF1O14829 653 aaPredicted RBP22.44■■□□□ 1.18
VPS72-204ENST00000471423 COL4A1P02462 1669 aa22.44■■□□□ 1.18
VPS72-204ENST00000471423 MYH3P11055 1940 aa22.44■■□□□ 1.18
VPS72-204ENST00000471423 CTSWP56202 376 aa22.44■■□□□ 1.18
VPS72-204ENST00000471423 RASSF7Q02833 373 aa22.44■■□□□ 1.18
VPS72-204ENST00000471423 FRAT1Q92837 279 aaPredicted RBP22.44■■□□□ 1.18
VPS72-204ENST00000471423 TAF1P21675 1872 aa22.43■■□□□ 1.18
VPS72-204ENST00000471423 GRM8O00222 908 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms