RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 NEUROD4Q9HD90 331 aa6.71□□□□□ -1.34
COPS3-206ENST00000471414 MKL2Q9ULH7 1088 aa6.71□□□□□ -1.34
COPS3-206ENST00000471414 KCNH4Q9UQ05 1017 aa6.71□□□□□ -1.34
COPS3-206ENST00000471414 ELOA3CA0A087WX78 387 aaPredicted RBP6.7□□□□□ -1.34
COPS3-206ENST00000471414 ELOA3DA6NLF2 546 aaPredicted RBP6.7□□□□□ -1.34
COPS3-206ENST00000471414 COL8A1P27658 744 aa6.7□□□□□ -1.34
COPS3-206ENST00000471414 FKBP5Q13451 457 aaPredicted RBP6.7□□□□□ -1.34
COPS3-206ENST00000471414 ELOA3BQ3SY89 546 aa6.7□□□□□ -1.34
COPS3-206ENST00000471414 ELOA3Q8NG57 546 aa6.7□□□□□ -1.34
COPS3-206ENST00000471414 NGLY1Q96IV0 654 aa6.7□□□□□ -1.34
COPS3-206ENST00000471414 PRR12Q9ULL5 1215 aa6.7□□□□□ -1.34
COPS3-206ENST00000471414 INPP5BP32019 993 aa6.69□□□□□ -1.34
COPS3-206ENST00000471414 ALYREFQ86V81 257 aaKnown RBP6.69□□□□□ -1.34
COPS3-206ENST00000471414 PBXIP1Q96AQ6 731 aa6.69□□□□□ -1.34
COPS3-206ENST00000471414 SERPINA10Q9UK55 444 aa6.69□□□□□ -1.34
COPS3-206ENST00000471414 LRFN2Q9ULH4 789 aa6.69□□□□□ -1.34
COPS3-206ENST00000471414 GNB5O14775 395 aa6.68□□□□□ -1.34
COPS3-206ENST00000471414 COL9A3Q14050 684 aaPredicted RBP6.68□□□□□ -1.34
COPS3-206ENST00000471414 PLA2G4EQ3MJ16 856 aa6.68□□□□□ -1.34
COPS3-206ENST00000471414 TMEM164Q5U3C3 297 aa6.68□□□□□ -1.34
COPS3-206ENST00000471414 COL26A1Q96A83 441 aa6.68□□□□□ -1.34
COPS3-206ENST00000471414 EFCC1Q9HA90 598 aa6.68□□□□□ -1.34
COPS3-206ENST00000471414 PRDM6Q9NQX0 595 aa6.68□□□□□ -1.34
COPS3-206ENST00000471414 KLK14Q9P0G3 267 aa6.68□□□□□ -1.34
COPS3-206ENST00000471414 SLAIN2Q9P270 581 aa6.68□□□□□ -1.34
COPS3-206ENST00000471414 STARD13Q9Y3M8 1113 aa6.68□□□□□ -1.34
COPS3-206ENST00000471414 IGHA1P01876 353 aa6.67□□□□□ -1.34
COPS3-206ENST00000471414 AMPD1P23109 780 aa6.67□□□□□ -1.34
COPS3-206ENST00000471414 CLP1Q92989 425 aaKnown RBP6.67□□□□□ -1.34
COPS3-206ENST00000471414 GSX2Q9BZM3 304 aa6.67□□□□□ -1.34
COPS3-206ENST00000471414 SUV39H2Q9H5I1 410 aa6.67□□□□□ -1.34
COPS3-206ENST00000471414 C1orf115Q9H7X2 142 aa6.67□□□□□ -1.34
COPS3-206ENST00000471414 RRAGCQ9HB90 399 aa6.67□□□□□ -1.34
COPS3-206ENST00000471414 C11orf16Q9NQ32 467 aa6.67□□□□□ -1.34
COPS3-206ENST00000471414 KRBA1A5PL33 1030 aa6.66□□□□□ -1.34
COPS3-206ENST00000471414 ARID3CA6NKF2 412 aa6.66□□□□□ -1.34
COPS3-206ENST00000471414 DGKZQ13574 1117 aa6.66□□□□□ -1.34
COPS3-206ENST00000471414 C11orf91Q3C1V1 193 aa6.66□□□□□ -1.34
COPS3-206ENST00000471414 COX20Q5RI15 118 aa6.66□□□□□ -1.34
COPS3-206ENST00000471414 RAB44Q7Z6P3 723 aaPredicted RBP6.66□□□□□ -1.34
COPS3-206ENST00000471414 CXXC1Q9P0U4 656 aaPredicted RBP6.66□□□□□ -1.34
COPS3-206ENST00000471414 PROCP04070 461 aa6.65□□□□□ -1.34
COPS3-206ENST00000471414 IDH3AP50213 366 aa6.65□□□□□ -1.34
COPS3-206ENST00000471414 C20orf204Q6ZNR8 217 aa6.65□□□□□ -1.34
COPS3-206ENST00000471414 TRIM11Q96F44 468 aa6.65□□□□□ -1.34
COPS3-206ENST00000471414 CCDC97Q96F63 343 aaPredicted RBP6.65□□□□□ -1.34
COPS3-206ENST00000471414 PRIMPOLQ96LW4 560 aa6.65□□□□□ -1.34
COPS3-206ENST00000471414 PIK3R2O00459 728 aa6.64□□□□□ -1.35
COPS3-206ENST00000471414 PRMT3O60678 531 aa6.64□□□□□ -1.35
COPS3-206ENST00000471414 MICAL2O94851 1124 aa6.64□□□□□ -1.35
COPS3-206ENST00000471414 ADH7P40394 386 aa6.64□□□□□ -1.35
COPS3-206ENST00000471414 OPLAHO14841 1288 aa6.63□□□□□ -1.35
COPS3-206ENST00000471414 EGFRP00533 1210 aa6.63□□□□□ -1.35
COPS3-206ENST00000471414 ALAS2P22557 587 aa6.63□□□□□ -1.35
COPS3-206ENST00000471414 ARSDP51689 593 aa6.63□□□□□ -1.35
COPS3-206ENST00000471414 NEUROD1Q13562 356 aa6.63□□□□□ -1.35
COPS3-206ENST00000471414 CCINQ13939 588 aa6.63□□□□□ -1.35
COPS3-206ENST00000471414 GPAT2Q6NUI2 795 aa6.63□□□□□ -1.35
COPS3-206ENST00000471414 ILDR2Q71H61 639 aa6.63□□□□□ -1.35
COPS3-206ENST00000471414 SAP130Q9H0E3 1048 aa6.63□□□□□ -1.35
COPS3-206ENST00000471414 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.63□□□□□ -1.35
COPS3-206ENST00000471414 TNFRSF10BO14763 440 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 MAP3K6O95382 1288 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 ALBP02768 609 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 FAM26DQ5JW98 314 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 CAPN12Q6ZSI9 719 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 MICALL1Q8N3F8 863 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 CCDC82Q8N4S0 544 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 BHMTQ93088 406 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 IFT43Q96FT9 208 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 SPOCK3Q9BQ16 436 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 NOP53Q9NZM5 478 aaKnown RBP6.62□□□□□ -1.35
COPS3-206ENST00000471414 ZFATQ9P243 1243 aa6.62□□□□□ -1.35
COPS3-206ENST00000471414 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.62□□□□□ -1.35
COPS3-206ENST00000471414 M0R082 166 aa6.61□□□□□ -1.35
COPS3-206ENST00000471414 NID1P14543 1247 aa6.61□□□□□ -1.35
COPS3-206ENST00000471414 EPB42P16452 691 aa6.61□□□□□ -1.35
COPS3-206ENST00000471414 C16orf46Q6P387 395 aa6.61□□□□□ -1.35
COPS3-206ENST00000471414 ETFBKMTQ8IXQ9 262 aa6.61□□□□□ -1.35
COPS3-206ENST00000471414 ZNF417Q8TAU3 575 aa6.61□□□□□ -1.35
COPS3-206ENST00000471414 VTI1AQ96AJ9 217 aa6.61□□□□□ -1.35
COPS3-206ENST00000471414 ZNF587Q96SQ5 575 aaPredicted RBP6.61□□□□□ -1.35
COPS3-206ENST00000471414 SLC6A14Q9UN76 642 aa6.61□□□□□ -1.35
COPS3-206ENST00000471414 TMEM88BA6NKF7 163 aa6.6□□□□□ -1.35
COPS3-206ENST00000471414 PTCD1O75127 700 aaKnown RBP6.6□□□□□ -1.35
COPS3-206ENST00000471414 TREML1Q86YW5 311 aa6.6□□□□□ -1.35
COPS3-206ENST00000471414 PLVAPQ9BX97 442 aa6.6□□□□□ -1.35
COPS3-206ENST00000471414 NAGPAQ9UK23 515 aa6.6□□□□□ -1.35
COPS3-206ENST00000471414 MSTNO14793 375 aa6.59□□□□□ -1.35
COPS3-206ENST00000471414 NFKB1P19838 968 aa6.59□□□□□ -1.35
COPS3-206ENST00000471414 C8orf86Q6ZUL3 223 aa6.59□□□□□ -1.35
COPS3-206ENST00000471414 TRPM4Q8TD43 1214 aa6.59□□□□□ -1.35
COPS3-206ENST00000471414 DNAJB12Q9NXW2 375 aaKnown RBP6.59□□□□□ -1.35
COPS3-206ENST00000471414 RTCBQ9Y3I0 505 aaKnown RBP6.59□□□□□ -1.35
COPS3-206ENST00000471414 KCNMB2Q9Y691 235 aa6.59□□□□□ -1.35
COPS3-206ENST00000471414 ZBTB42B2RXF5 422 aa6.58□□□□□ -1.36
COPS3-206ENST00000471414 PPP1R15AO75807 674 aaPredicted RBP6.58□□□□□ -1.36
COPS3-206ENST00000471414 HOXD8P13378 290 aaPredicted RBP6.58□□□□□ -1.36
COPS3-206ENST00000471414 UBE2OQ9C0C9 1292 aaKnown RBP6.58□□□□□ -1.36
COPS3-206ENST00000471414 SPATA31C1P0DKV0 1188 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms