RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 KCNH4Q9UQ05 1017 aa4.57□□□□□ -1.68
COMMD3-209ENST00000471350 A0A0A0MRY4 1105 aa4.56□□□□□ -1.68
COMMD3-209ENST00000471350 FLIIQ13045 1269 aa4.56□□□□□ -1.68
COMMD3-209ENST00000471350 MBTPS1Q14703 1052 aa4.56□□□□□ -1.68
COMMD3-209ENST00000471350 GRIK5Q16478 980 aa4.56□□□□□ -1.68
COMMD3-209ENST00000471350 ZMYM1Q5SVZ6 1142 aa4.56□□□□□ -1.68
COMMD3-209ENST00000471350 GAS2L2Q8NHY3 880 aa4.56□□□□□ -1.68
COMMD3-209ENST00000471350 ZNF594Q96JF6 807 aaPredicted RBP4.56□□□□□ -1.68
COMMD3-209ENST00000471350 SLC6A14Q9UN76 642 aa4.56□□□□□ -1.68
COMMD3-209ENST00000471350 MAFBQ9Y5Q3 323 aaPredicted RBP4.56□□□□□ -1.68
COMMD3-209ENST00000471350 ATAD2Q6PL18 1390 aa4.55□□□□□ -1.68
COMMD3-209ENST00000471350 AFF1P51825 1210 aaKnown RBP4.55□□□□□ -1.68
COMMD3-209ENST00000471350 PRRT3Q5FWE3 981 aa4.55□□□□□ -1.68
COMMD3-209ENST00000471350 KANK4Q5T7N3 995 aaPredicted RBP4.55□□□□□ -1.68
COMMD3-209ENST00000471350 IER5Q5VY09 327 aa4.55□□□□□ -1.68
COMMD3-209ENST00000471350 SHISA2Q6UWI4 295 aa4.55□□□□□ -1.68
COMMD3-209ENST00000471350 BHMTQ93088 406 aa4.55□□□□□ -1.68
COMMD3-209ENST00000471350 SPDYE3A6NKU9 549 aa4.54□□□□□ -1.68
COMMD3-209ENST00000471350 ZBTB42B2RXF5 422 aa4.54□□□□□ -1.68
COMMD3-209ENST00000471350 PPP1R12BO60237 982 aaPredicted RBP4.54□□□□□ -1.68
COMMD3-209ENST00000471350 UBTFP17480 764 aaKnown RBP4.54□□□□□ -1.68
COMMD3-209ENST00000471350 PLAURQ03405 335 aa4.54□□□□□ -1.68
COMMD3-209ENST00000471350 PTK7Q13308 1070 aa4.54□□□□□ -1.68
COMMD3-209ENST00000471350 CRTC2Q53ET0 693 aaPredicted RBP4.54□□□□□ -1.68
COMMD3-209ENST00000471350 PRSS36Q5K4E3 855 aa4.54□□□□□ -1.68
COMMD3-209ENST00000471350 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
COMMD3-209ENST00000471350 ANKIB1Q9P2G1 1089 aa4.54□□□□□ -1.68
COMMD3-209ENST00000471350 TFIP11Q9UBB9 837 aaKnown RBP4.54□□□□□ -1.68
COMMD3-209ENST00000471350 TGFBR3LH3BV60 316 aa4.53□□□□□ -1.68
COMMD3-209ENST00000471350 LILRB5O75023 590 aa4.53□□□□□ -1.68
COMMD3-209ENST00000471350 APBA3O96018 575 aa4.53□□□□□ -1.68
COMMD3-209ENST00000471350 TRIM28Q13263 835 aaKnown RBP4.53□□□□□ -1.68
COMMD3-209ENST00000471350 FMR1NBQ8N0W7 255 aaPredicted RBP4.53□□□□□ -1.68
COMMD3-209ENST00000471350 SCG3Q8WXD2 468 aaKnown RBP4.53□□□□□ -1.68
COMMD3-209ENST00000471350 CLUAP1Q96AJ1 413 aa4.53□□□□□ -1.68
COMMD3-209ENST00000471350 LENG1Q96BZ8 264 aaPredicted RBP4.53□□□□□ -1.68
COMMD3-209ENST00000471350 ARXQ96QS3 562 aa4.53□□□□□ -1.68
COMMD3-209ENST00000471350 LPIN3Q9BQK8 851 aa4.53□□□□□ -1.68
COMMD3-209ENST00000471350 NEUROD4Q9HD90 331 aa4.53□□□□□ -1.68
COMMD3-209ENST00000471350 DNAJB12Q9NXW2 375 aaKnown RBP4.53□□□□□ -1.68
COMMD3-209ENST00000471350 ZFATQ9P243 1243 aa4.53□□□□□ -1.68
COMMD3-209ENST00000471350 LGR5O75473 907 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 H2AFB1P0C5Y9 115 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 H2AFB2P0C5Z0 115 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 ELNP15502 786 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 INPP5BP32019 993 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 SEC13P55735 322 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 RTN1Q16799 776 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 ARTNQ5T4W7 220 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 GLMNQ92990 594 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 QTRT2Q9H974 415 aaKnown RBP4.52□□□□□ -1.69
COMMD3-209ENST00000471350 EFCC1Q9HA90 598 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 CHMP3Q9Y3E7 222 aa4.52□□□□□ -1.69
COMMD3-209ENST00000471350 RBM19Q9Y4C8 960 aaKnown RBP4.52□□□□□ -1.69
COMMD3-209ENST00000471350 C9orf172C9J069 976 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 NFKB1P19838 968 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 RASA1P20936 1047 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 IGFBP4P22692 258 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 DPYDQ12882 1025 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 TRAPPC3LQ5T215 181 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 PSAPL1Q6NUJ1 521 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 TXNRD3Q86VQ6 643 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 NUDT8Q8WV74 236 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 NGLY1Q96IV0 654 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 NACC1Q96RE7 527 aa4.51□□□□□ -1.69
COMMD3-209ENST00000471350 UBE2OQ9C0C9 1292 aaKnown RBP4.51□□□□□ -1.69
COMMD3-209ENST00000471350 JPH1Q9HDC5 661 aaPredicted RBP4.51□□□□□ -1.69
COMMD3-209ENST00000471350 OPLAHO14841 1288 aa4.5□□□□□ -1.69
COMMD3-209ENST00000471350 MAP3K6O95382 1288 aa4.5□□□□□ -1.69
COMMD3-209ENST00000471350 WEE1P30291 646 aa4.5□□□□□ -1.69
COMMD3-209ENST00000471350 NRG1Q02297 640 aaPredicted RBP4.5□□□□□ -1.69
COMMD3-209ENST00000471350 NEUROD1Q13562 356 aa4.5□□□□□ -1.69
COMMD3-209ENST00000471350 CCINQ13939 588 aa4.5□□□□□ -1.69
COMMD3-209ENST00000471350 PERM1Q5SV97 790 aa4.5□□□□□ -1.69
COMMD3-209ENST00000471350 TRPM4Q8TD43 1214 aa4.5□□□□□ -1.69
COMMD3-209ENST00000471350 IFT43Q96FT9 208 aa4.5□□□□□ -1.69
COMMD3-209ENST00000471350 PPP1R12CQ9BZL4 782 aa4.5□□□□□ -1.69
COMMD3-209ENST00000471350 KLK14Q9P0G3 267 aa4.5□□□□□ -1.69
COMMD3-209ENST00000471350 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.5□□□□□ -1.69
COMMD3-209ENST00000471350 FAM196BA6NMK8 535 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L15C9J2P7 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L10C9JJH3 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L13C9JLJ4 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L12C9JPN9 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L11C9JVI0 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L21D6R901 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L18D6R9N7 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L22D6RA61 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L17D6RBQ6 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L19D6RCP7 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L20D6RJB6 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 DEAF1O75398 565 aaPredicted RBP4.49□□□□□ -1.69
COMMD3-209ENST00000471350 USP17L24Q0WX57 530 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 PROSER2Q86WR7 435 aaPredicted RBP4.49□□□□□ -1.69
COMMD3-209ENST00000471350 KRTAP1-3Q8IUG1 177 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 DMRTC2Q8IXT2 367 aaPredicted RBP4.49□□□□□ -1.69
COMMD3-209ENST00000471350 CHMP7Q8WUX9 453 aaPredicted RBP4.49□□□□□ -1.69
COMMD3-209ENST00000471350 MYO19Q96H55 970 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 LRFN2Q9ULH4 789 aa4.49□□□□□ -1.69
COMMD3-209ENST00000471350 TARSP26639 723 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms