RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 C2CD5Q86YS7 1000 aa11.51□□□□□ -0.57
PTPRE-207ENST00000471218 BRIP1Q9BX63 1249 aa11.51□□□□□ -0.57
PTPRE-207ENST00000471218 DDX21Q9NR30 783 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTPRE-207ENST00000471218 HDAC5Q9UQL6 1122 aa11.51□□□□□ -0.57
PTPRE-207ENST00000471218 COL15A1P39059 1388 aa11.51□□□□□ -0.57
PTPRE-207ENST00000471218 KCPQ6ZWJ8 1503 aa11.5□□□□□ -0.57
PTPRE-207ENST00000471218 PCNTO95613 3336 aa11.5□□□□□ -0.57
PTPRE-207ENST00000471218 ZBTB7BO15156 539 aaPredicted RBP11.5□□□□□ -0.57
PTPRE-207ENST00000471218 NPHP1O15259 732 aa11.5□□□□□ -0.57
PTPRE-207ENST00000471218 DDX58O95786 925 aaKnown RBP11.5□□□□□ -0.57
PTPRE-207ENST00000471218 VIRMAQ69YN4 1812 aaKnown RBP11.5□□□□□ -0.57
PTPRE-207ENST00000471218 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
PTPRE-207ENST00000471218 UBR2Q8IWV8 1755 aa11.49□□□□□ -0.57
PTPRE-207ENST00000471218 EIF5P55010 431 aaKnown RBP11.49□□□□□ -0.57
PTPRE-207ENST00000471218 TNS4Q8IZW8 715 aa11.49□□□□□ -0.57
PTPRE-207ENST00000471218 CNKSR1Q969H4 720 aa11.49□□□□□ -0.57
PTPRE-207ENST00000471218 WDR90Q96KV7 1748 aa11.49□□□□□ -0.57
PTPRE-207ENST00000471218 TCERG1O14776 1098 aaKnown RBP11.48□□□□□ -0.57
PTPRE-207ENST00000471218 GNAI3P08754 354 aa11.48□□□□□ -0.57
PTPRE-207ENST00000471218 IL6STP40189 918 aaPredicted RBP11.48□□□□□ -0.57
PTPRE-207ENST00000471218 FKBP5Q13451 457 aaPredicted RBP11.48□□□□□ -0.57
PTPRE-207ENST00000471218 ERFEQ4G0M1 354 aa11.48□□□□□ -0.57
PTPRE-207ENST00000471218 ZNF496Q96IT1 587 aaPredicted RBP11.48□□□□□ -0.57
PTPRE-207ENST00000471218 SETDB2Q96T68 719 aa11.48□□□□□ -0.57
PTPRE-207ENST00000471218 ZBTB1Q9Y2K1 713 aa11.48□□□□□ -0.57
PTPRE-207ENST00000471218 LAMB4A4D0S4 1761 aa11.47□□□□□ -0.57
PTPRE-207ENST00000471218 LTBP3Q9NS15 1303 aa11.47□□□□□ -0.57
PTPRE-207ENST00000471218 IQCA1LA6NCM1 817 aa11.47□□□□□ -0.57
PTPRE-207ENST00000471218 PRELPP51888 382 aa11.47□□□□□ -0.57
PTPRE-207ENST00000471218 ST5P78524 1137 aa11.47□□□□□ -0.57
PTPRE-207ENST00000471218 SLC39A6Q13433 755 aa11.47□□□□□ -0.57
PTPRE-207ENST00000471218 RPAP2Q8IXW5 612 aaPredicted RBP11.47□□□□□ -0.57
PTPRE-207ENST00000471218 ZNF622Q969S3 477 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTPRE-207ENST00000471218 CHPF2Q9P2E5 772 aa11.47□□□□□ -0.57
PTPRE-207ENST00000471218 SBF1O95248 1867 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 RGL2O15211 777 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 KCNQ3O43525 872 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 ALDH1L1O75891 902 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 RASSF7Q02833 373 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 COL13A1Q5TAT6 717 aaPredicted RBP11.46□□□□□ -0.57
PTPRE-207ENST00000471218 STYK1Q6J9G0 422 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 CLEC4GQ6UXB4 293 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 GCC1Q96CN9 775 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 TAOK3Q9H2K8 898 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 ZNF652Q9Y2D9 606 aa11.46□□□□□ -0.57
PTPRE-207ENST00000471218 HTRA3P83110 453 aa11.45□□□□□ -0.58
PTPRE-207ENST00000471218 KSR2Q6VAB6 950 aa11.45□□□□□ -0.58
PTPRE-207ENST00000471218 BICDL1Q6ZP65 573 aa11.45□□□□□ -0.58
PTPRE-207ENST00000471218 SMC5Q8IY18 1101 aa11.45□□□□□ -0.58
PTPRE-207ENST00000471218 CNBD1Q8NA66 436 aa11.45□□□□□ -0.58
PTPRE-207ENST00000471218 DNAAF4Q8WXU2 420 aa11.45□□□□□ -0.58
PTPRE-207ENST00000471218 BCL2L12Q9HB09 334 aa11.45□□□□□ -0.58
PTPRE-207ENST00000471218 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
PTPRE-207ENST00000471218 TNNQ9UQP3 1299 aa11.45□□□□□ -0.58
PTPRE-207ENST00000471218 PCDHB15Q9Y5E8 787 aa11.45□□□□□ -0.58
PTPRE-207ENST00000471218 NFKBIEO00221 500 aa11.44□□□□□ -0.58
PTPRE-207ENST00000471218 HMMRO75330 724 aa11.44□□□□□ -0.58
PTPRE-207ENST00000471218 PDIA6Q15084 440 aa11.44□□□□□ -0.58
PTPRE-207ENST00000471218 CHADLQ6NUI6 762 aa11.44□□□□□ -0.58
PTPRE-207ENST00000471218 G2E3Q7L622 706 aa11.44□□□□□ -0.58
PTPRE-207ENST00000471218 MASTLQ96GX5 879 aa11.44□□□□□ -0.58
PTPRE-207ENST00000471218 SRCIN1Q9C0H9 1055 aa11.44□□□□□ -0.58
PTPRE-207ENST00000471218 TJP1Q07157 1748 aa11.43□□□□□ -0.58
PTPRE-207ENST00000471218 C21orf2O43822 256 aa11.43□□□□□ -0.58
PTPRE-207ENST00000471218 HSPA1AP0DMV8 641 aaKnown RBP11.43□□□□□ -0.58
PTPRE-207ENST00000471218 HSPA1BP0DMV9 641 aaKnown RBP11.43□□□□□ -0.58
PTPRE-207ENST00000471218 EIF2S2P20042 333 aaKnown RBP11.43□□□□□ -0.58
PTPRE-207ENST00000471218 TBC1D9BQ66K14 1250 aa11.43□□□□□ -0.58
PTPRE-207ENST00000471218 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
PTPRE-207ENST00000471218 LINS1Q8NG48 757 aa11.43□□□□□ -0.58
PTPRE-207ENST00000471218 NRXN2Q9P2S2 1712 aa11.43□□□□□ -0.58
PTPRE-207ENST00000471218 GNAI2P04899 355 aa11.42□□□□□ -0.58
PTPRE-207ENST00000471218 SRGNP10124 158 aa11.42□□□□□ -0.58
PTPRE-207ENST00000471218 GRIPAP1Q4V328 841 aa11.42□□□□□ -0.58
PTPRE-207ENST00000471218 PRR5LQ6MZQ0 368 aa11.42□□□□□ -0.58
PTPRE-207ENST00000471218 TPTE2Q6XPS3 522 aa11.42□□□□□ -0.58
PTPRE-207ENST00000471218 ANKRD44Q8N8A2 993 aa11.42□□□□□ -0.58
PTPRE-207ENST00000471218 ZNF330Q9Y3S2 320 aaPredicted RBP11.42□□□□□ -0.58
PTPRE-207ENST00000471218 UTYO14607 1347 aa11.41□□□□□ -0.58
PTPRE-207ENST00000471218 PI4KAP2A4QPH2 592 aa11.41□□□□□ -0.58
PTPRE-207ENST00000471218 ALDH1B1P30837 517 aa11.41□□□□□ -0.58
PTPRE-207ENST00000471218 NEXNQ0ZGT2 675 aa11.41□□□□□ -0.58
PTPRE-207ENST00000471218 CCDC93Q567U6 631 aa11.41□□□□□ -0.58
PTPRE-207ENST00000471218 BEND3Q5T5X7 828 aa11.41□□□□□ -0.58
PTPRE-207ENST00000471218 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
PTPRE-207ENST00000471218 LDHDQ86WU2 507 aa11.41□□□□□ -0.58
PTPRE-207ENST00000471218 DZIP3Q86Y13 1208 aaKnown RBP11.41□□□□□ -0.58
PTPRE-207ENST00000471218 RTKN2Q8IZC4 609 aa11.41□□□□□ -0.58
PTPRE-207ENST00000471218 PI4KAP1Q8N8J0 262 aa11.41□□□□□ -0.58
PTPRE-207ENST00000471218 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
PTPRE-207ENST00000471218 AFDNP55196 1824 aaKnown RBP11.4□□□□□ -0.58
PTPRE-207ENST00000471218 POTECB2RU33 542 aa11.4□□□□□ -0.58
PTPRE-207ENST00000471218 IGHDP01880 384 aa11.4□□□□□ -0.58
PTPRE-207ENST00000471218 NPR1P16066 1061 aa11.4□□□□□ -0.58
PTPRE-207ENST00000471218 PRPF40BQ6NWY9 871 aaKnown RBP11.4□□□□□ -0.58
PTPRE-207ENST00000471218 SLC4A10Q6U841 1118 aa11.4□□□□□ -0.58
PTPRE-207ENST00000471218 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.58
PTPRE-207ENST00000471218 PLBD2Q8NHP8 589 aa11.4□□□□□ -0.58
PTPRE-207ENST00000471218 AIDAQ96BJ3 306 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms