RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 MNAT1P51948 309 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 SMC1AQ14683 1233 aaKnown RBP4.98□□□□□ -1.61
VPS50-210ENST00000471188 OTUD7AQ8TE49 926 aaPredicted RBP4.98□□□□□ -1.61
VPS50-210ENST00000471188 CARD10Q9BWT7 1032 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 NUP62CLQ9H1M0 184 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 FAM53CQ9NYF3 392 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 HCSTQ9UBK5 93 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 SUFUQ9UMX1 484 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 ATP6V1DQ9Y5K8 247 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 PTPRCP08575 1304 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 KDM4FA0A1W2PPD8 638 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 VPS37CA5D8V6 355 aaPredicted RBP4.97□□□□□ -1.61
VPS50-210ENST00000471188 ATP6V1AP38606 617 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 ZNF75DP51815 510 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 TYRO3Q06418 890 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 SNW1Q13573 536 aaKnown RBP4.97□□□□□ -1.61
VPS50-210ENST00000471188 PROX2Q3B8N5 592 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 CCAR2Q8N163 923 aaKnown RBP4.97□□□□□ -1.61
VPS50-210ENST00000471188 ZNF526Q8TF50 670 aaPredicted RBP4.97□□□□□ -1.61
VPS50-210ENST00000471188 TNMDQ9H2S6 317 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 DNMT1P26358 1616 aaKnown RBP4.97□□□□□ -1.61
VPS50-210ENST00000471188 RGS20O76081 388 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 CT47B1P0C2W7 299 aaPredicted RBP4.97□□□□□ -1.61
VPS50-210ENST00000471188 MAGEA9P43362 315 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 ZNF165P49910 485 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 DNM1Q05193 864 aaKnown RBP4.97□□□□□ -1.61
VPS50-210ENST00000471188 CCDC144BQ3MJ40 725 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 CCDC144CPQ8IYA2 1237 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 DNAAF4Q8WXU2 420 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 CBX8Q9HC52 389 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 PDRG1Q9NUG6 133 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 PPIP5K1Q6PFW1 1433 aa4.97□□□□□ -1.61
VPS50-210ENST00000471188 CCDC69A6NI79 296 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 GOLGA8CPA6NN73 597 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 H2AFXP16104 143 aaPredicted RBP4.96□□□□□ -1.61
VPS50-210ENST00000471188 ACTN2P35609 894 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 SATB1Q01826 763 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 PPP2R5AQ15172 486 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 LRRC8AQ8IWT6 810 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 MICALL1Q8N3F8 863 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 LRRN4CLQ8ND94 238 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 PPM1EQ8WY54 764 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 SMC3Q9UQE7 1217 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 USP16Q9Y5T5 823 aa4.96□□□□□ -1.61
VPS50-210ENST00000471188 NEO1Q92859 1461 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 BECN2A8MW95 431 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 EIF3CLB5ME19 914 aaKnown RBP4.96□□□□□ -1.62
VPS50-210ENST00000471188 ZBTB7BO15156 539 aaPredicted RBP4.96□□□□□ -1.62
VPS50-210ENST00000471188 STX6O43752 255 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 URI1O94763 535 aaPredicted RBP4.96□□□□□ -1.62
VPS50-210ENST00000471188 IVLP07476 585 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 ZSCAN22P10073 491 aaPredicted RBP4.96□□□□□ -1.62
VPS50-210ENST00000471188 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.96□□□□□ -1.62
VPS50-210ENST00000471188 RILPL2Q969X0 211 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 INTS4Q96HW7 963 aaKnown RBP4.96□□□□□ -1.62
VPS50-210ENST00000471188 EIF3CQ99613 913 aaKnown RBP4.96□□□□□ -1.62
VPS50-210ENST00000471188 FUCA2Q9BTY2 467 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 DNAJC25Q9H1X3 360 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 DONSONQ9NYP3 566 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 ADAM21Q9UKJ8 722 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 IQSEC2Q5JU85 1478 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 ASXL2Q76L83 1435 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 KIF2AO00139 706 aaPredicted RBP4.96□□□□□ -1.62
VPS50-210ENST00000471188 CUL4AQ13619 759 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 ZRSR1Q15695 479 aaKnown RBP4.96□□□□□ -1.62
VPS50-210ENST00000471188 MCTP2Q6DN12 878 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 SIRT2Q8IXJ6 389 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 FAM177A1Q8N128 213 aaPredicted RBP4.96□□□□□ -1.62
VPS50-210ENST00000471188 FBXW7Q969H0 707 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 CARD14Q9BXL6 1004 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 EPC1Q9H2F5 836 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 VPS18Q9P253 973 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 STK26Q9P289 416 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 MRVI1Q9Y6F6 885 aa4.96□□□□□ -1.62
VPS50-210ENST00000471188 NRDCO43847 1150 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 LRCH2Q5VUJ6 765 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 RPAINQ86UA6 219 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 FERMT3Q86UX7 667 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 EGFL6Q8IUX8 553 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 ATG3Q9NT62 314 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 SEPT9Q9UHD8 586 aaPredicted RBP4.95□□□□□ -1.62
VPS50-210ENST00000471188 DNAI1Q9UI46 699 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 PALD1Q9ULE6 856 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 TRPM1Q7Z4N2 1603 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 ATAD2Q6PL18 1390 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 RAD50Q92878 1312 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 F13A1P00488 732 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 SYT1P21579 422 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 MCM6Q14566 821 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 HSP90AB3PQ58FF7 597 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 TSHZ3Q63HK5 1081 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.95□□□□□ -1.62
VPS50-210ENST00000471188 BICD2Q8TD16 824 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 JPH4Q96JJ6 628 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 PLEKHA4Q9H4M7 779 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 ARFGAP3Q9NP61 516 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 DACT1Q9NYF0 836 aa4.95□□□□□ -1.62
VPS50-210ENST00000471188 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS50-210ENST00000471188 POLR3AO14802 1390 aaPredicted RBP4.95□□□□□ -1.62
VPS50-210ENST00000471188 MADDQ8WXG6 1647 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms