RNA–Protein interactions for RNA: ENST00000471161.1

TMEM139-206, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 1,724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-206ENST00000471161 PDE1AP54750 535 aa16.16■□□□□ 0.18
TMEM139-206ENST00000471161 FOXO4P98177 505 aa16.16■□□□□ 0.18
TMEM139-206ENST00000471161 KIF1BPQ96EK5 621 aa16.16■□□□□ 0.18
TMEM139-206ENST00000471161 RFX5P48382 616 aaPredicted RBP16.15■□□□□ 0.18
TMEM139-206ENST00000471161 HSP90AB4PQ58FF6 505 aa16.15■□□□□ 0.18
TMEM139-206ENST00000471161 KLHDC4Q8TBB5 520 aa16.15■□□□□ 0.18
TMEM139-206ENST00000471161 OSBPL3Q9H4L5 887 aa16.15■□□□□ 0.18
TMEM139-206ENST00000471161 LY75O60449 1722 aa16.15■□□□□ 0.18
TMEM139-206ENST00000471161 ERVV-1B6SEH8 477 aa16.14■□□□□ 0.17
TMEM139-206ENST00000471161 GPTP24298 496 aa16.14■□□□□ 0.17
TMEM139-206ENST00000471161 TSHZ3Q63HK5 1081 aa16.14■□□□□ 0.17
TMEM139-206ENST00000471161 OS9Q13438 667 aaPredicted RBP16.14■□□□□ 0.17
TMEM139-206ENST00000471161 LMBR1LQ6UX01 489 aa16.14■□□□□ 0.17
TMEM139-206ENST00000471161 MX1P20591 662 aa16.13■□□□□ 0.17
TMEM139-206ENST00000471161 ANP32AP39687 249 aaKnown RBP16.13■□□□□ 0.17
TMEM139-206ENST00000471161 HSP90AB3PQ58FF7 597 aa16.13■□□□□ 0.17
TMEM139-206ENST00000471161 NLRP10Q86W26 655 aa16.13■□□□□ 0.17
TMEM139-206ENST00000471161 NUTM1Q86Y26 1132 aa16.13■□□□□ 0.17
TMEM139-206ENST00000471161 SIL1Q9H173 461 aa16.13■□□□□ 0.17
TMEM139-206ENST00000471161 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.13■□□□□ 0.17
TMEM139-206ENST00000471161 TAF1LQ8IZX4 1826 aa16.13■□□□□ 0.17
TMEM139-206ENST00000471161 SASH1O94885 1247 aa16.12■□□□□ 0.17
TMEM139-206ENST00000471161 PCCAP05165 728 aaPredicted RBP16.12■□□□□ 0.17
TMEM139-206ENST00000471161 PTPN12Q05209 780 aaKnown RBP16.12■□□□□ 0.17
TMEM139-206ENST00000471161 FAM89AQ96GI7 184 aa16.12■□□□□ 0.17
TMEM139-206ENST00000471161 STAP2Q9UGK3 403 aa16.12■□□□□ 0.17
TMEM139-206ENST00000471161 BCORQ6W2J9 1755 aa16.11■□□□□ 0.17
TMEM139-206ENST00000471161 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
TMEM139-206ENST00000471161 SDSP20132 328 aa16.11■□□□□ 0.17
TMEM139-206ENST00000471161 SYNE4Q8N205 404 aa16.11■□□□□ 0.17
TMEM139-206ENST00000471161 ZBTB38Q8NAP3 1195 aaPredicted RBP16.11■□□□□ 0.17
TMEM139-206ENST00000471161 COPRSQ9NQ92 184 aa16.11■□□□□ 0.17
TMEM139-206ENST00000471161 UBN2Q6ZU65 1347 aa16.11■□□□□ 0.17
TMEM139-206ENST00000471161 CNTNAP4Q9C0A0 1308 aa16.11■□□□□ 0.17
TMEM139-206ENST00000471161 G3BP1Q13283 466 aaKnown RBP eCLIP16.11■□□□□ 0.17
TMEM139-206ENST00000471161 ERC1Q8IUD2 1116 aa16.11■□□□□ 0.17
TMEM139-206ENST00000471161 ZNF34Q8IZ26 560 aa16.11■□□□□ 0.17
TMEM139-206ENST00000471161 TBC1D9Q6ZT07 1266 aa16.1■□□□□ 0.17
TMEM139-206ENST00000471161 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
TMEM139-206ENST00000471161 KRT27Q7Z3Y8 459 aa16.1■□□□□ 0.17
TMEM139-206ENST00000471161 MYH3P11055 1940 aa16.09■□□□□ 0.17
TMEM139-206ENST00000471161 BCL11BQ9C0K0 894 aaPredicted RBP16.09■□□□□ 0.17
TMEM139-206ENST00000471161 CCNL1Q9UK58 526 aaPredicted RBP16.09■□□□□ 0.17
TMEM139-206ENST00000471161 CHMP3Q9Y3E7 222 aa16.09■□□□□ 0.17
TMEM139-206ENST00000471161 CDC45O75419 566 aa16.08■□□□□ 0.17
TMEM139-206ENST00000471161 MFAP1P55081 439 aaKnown RBP16.08■□□□□ 0.17
TMEM139-206ENST00000471161 ZNF772Q68DY9 489 aaPredicted RBP16.08■□□□□ 0.17
TMEM139-206ENST00000471161 PLA2G12BQ9BX93 195 aa16.08■□□□□ 0.17
TMEM139-206ENST00000471161 CDHR2Q9BYE9 1310 aa16.08■□□□□ 0.16
TMEM139-206ENST00000471161 RBM6P78332 1123 aaKnown RBP16.08■□□□□ 0.16
TMEM139-206ENST00000471161 CLASRPQ8N2M8 674 aaKnown RBP16.08■□□□□ 0.16
TMEM139-206ENST00000471161 PI4K2BQ8TCG2 481 aa16.08■□□□□ 0.16
TMEM139-206ENST00000471161 AOX1Q06278 1338 aa16.07■□□□□ 0.16
TMEM139-206ENST00000471161 MSH5O43196 834 aa16.07■□□□□ 0.16
TMEM139-206ENST00000471161 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
TMEM139-206ENST00000471161 FAM196AQ6ZSG2 479 aa16.07■□□□□ 0.16
TMEM139-206ENST00000471161 EAF2Q96CJ1 260 aaPredicted RBP16.07■□□□□ 0.16
TMEM139-206ENST00000471161 TRMT112Q9UI30 125 aaKnown RBP16.07■□□□□ 0.16
TMEM139-206ENST00000471161 SUSD4Q5VX71 490 aa16.06■□□□□ 0.16
TMEM139-206ENST00000471161 TBC1D32Q96NH3 1257 aa16.06■□□□□ 0.16
TMEM139-206ENST00000471161 USP42Q9H9J4 1324 aaKnown RBP16.06■□□□□ 0.16
TMEM139-206ENST00000471161 EP400Q96L91 3159 aa16.06■□□□□ 0.16
TMEM139-206ENST00000471161 AK9Q5TCS8 1911 aa16.06■□□□□ 0.16
TMEM139-206ENST00000471161 CSF1RP07333 972 aa16.05■□□□□ 0.16
TMEM139-206ENST00000471161 AACSQ86V21 672 aa16.05■□□□□ 0.16
TMEM139-206ENST00000471161 AMIGO3Q86WK7 504 aa16.05■□□□□ 0.16
TMEM139-206ENST00000471161 ZNF594Q96JF6 807 aaPredicted RBP16.05■□□□□ 0.16
TMEM139-206ENST00000471161 IPO9Q96P70 1041 aaKnown RBP16.05■□□□□ 0.16
TMEM139-206ENST00000471161 CCDC85AQ96PX6 553 aaPredicted RBP16.05■□□□□ 0.16
TMEM139-206ENST00000471161 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
TMEM139-206ENST00000471161 C4BP0C0L5 1744 aa16.05■□□□□ 0.16
TMEM139-206ENST00000471161 IRS4O14654 1257 aaPredicted RBP16.05■□□□□ 0.16
TMEM139-206ENST00000471161 RPS6KA4O75676 772 aa16.05■□□□□ 0.16
TMEM139-206ENST00000471161 TFCP2Q12800 502 aa16.05■□□□□ 0.16
TMEM139-206ENST00000471161 ATG9AQ7Z3C6 839 aa16.05■□□□□ 0.16
TMEM139-206ENST00000471161 UPF2Q9HAU5 1272 aaKnown RBP16.05■□□□□ 0.16
TMEM139-206ENST00000471161 LRRC4BQ9NT99 713 aa16.05■□□□□ 0.16
TMEM139-206ENST00000471161 GNPATO15228 680 aa16.04■□□□□ 0.16
TMEM139-206ENST00000471161 TRIM37O94972 964 aa16.04■□□□□ 0.16
TMEM139-206ENST00000471161 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
TMEM139-206ENST00000471161 CCDC8Q9H0W5 538 aaPredicted RBP16.04■□□□□ 0.16
TMEM139-206ENST00000471161 TLR7Q9NYK1 1049 aaKnown RBP16.04■□□□□ 0.16
TMEM139-206ENST00000471161 NIP7Q9Y221 180 aaKnown RBP eCLIP16.04■□□□□ 0.16
TMEM139-206ENST00000471161 DDX60Q8IY21 1712 aaKnown RBP16.03■□□□□ 0.16
TMEM139-206ENST00000471161 FAM177BA6PVY3 158 aa16.03■□□□□ 0.16
TMEM139-206ENST00000471161 LRRC24Q50LG9 513 aa16.03■□□□□ 0.16
TMEM139-206ENST00000471161 TTLL11Q8NHH1 800 aa16.03■□□□□ 0.16
TMEM139-206ENST00000471161 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
TMEM139-206ENST00000471161 MAP4K4O95819 1239 aaPredicted RBP16.02■□□□□ 0.16
TMEM139-206ENST00000471161 CTSWP56202 376 aa16.02■□□□□ 0.16
TMEM139-206ENST00000471161 PUS3Q9BZE2 481 aaKnown RBP16.02■□□□□ 0.16
TMEM139-206ENST00000471161 BCL2L12Q9HB09 334 aa16.02■□□□□ 0.16
TMEM139-206ENST00000471161 C4AP0C0L4 1744 aa16.02■□□□□ 0.15
TMEM139-206ENST00000471161 TRIM6-TRIM34B2RNG4 842 aa16.02■□□□□ 0.15
TMEM139-206ENST00000471161 EYA2O00167 538 aa16.02■□□□□ 0.15
TMEM139-206ENST00000471161 PDE8AO60658 829 aa16.02■□□□□ 0.15
TMEM139-206ENST00000471161 CCDC57Q2TAC2 916 aa16.02■□□□□ 0.15
TMEM139-206ENST00000471161 PARP10Q53GL7 1025 aa16.02■□□□□ 0.15
TMEM139-206ENST00000471161 TNNI3KQ59H18 835 aa16.02■□□□□ 0.15
TMEM139-206ENST00000471161 CLEC4GQ6UXB4 293 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms