RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 TROQ12816 1431 aaPredicted RBP9.31□□□□□ -0.92
GPNMB-208ENST00000470994 FRMPD1Q5SYB0 1578 aa9.3□□□□□ -0.92
GPNMB-208ENST00000470994 ATP10AO60312 1499 aa9.3□□□□□ -0.92
GPNMB-208ENST00000470994 MAGI2Q86UL8 1455 aa9.3□□□□□ -0.92
GPNMB-208ENST00000470994 STAU1O95793 577 aaKnown RBP9.3□□□□□ -0.92
GPNMB-208ENST00000470994 SMTNP53814 917 aa9.3□□□□□ -0.92
GPNMB-208ENST00000470994 PRRT3Q5FWE3 981 aa9.3□□□□□ -0.92
GPNMB-208ENST00000470994 PHTF2Q8N3S3 785 aa9.3□□□□□ -0.92
GPNMB-208ENST00000470994 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
GPNMB-208ENST00000470994 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
GPNMB-208ENST00000470994 ADAMTSL3P82987 1691 aa9.29□□□□□ -0.92
GPNMB-208ENST00000470994 TTC37Q6PGP7 1564 aa9.29□□□□□ -0.92
GPNMB-208ENST00000470994 ALAS2P22557 587 aa9.29□□□□□ -0.92
GPNMB-208ENST00000470994 SCNN1DP51172 638 aa9.29□□□□□ -0.92
GPNMB-208ENST00000470994 MAP7D1Q3KQU3 841 aa9.29□□□□□ -0.92
GPNMB-208ENST00000470994 MADDQ8WXG6 1647 aa9.28□□□□□ -0.92
GPNMB-208ENST00000470994 ARHGEF40Q8TER5 1519 aa9.28□□□□□ -0.92
GPNMB-208ENST00000470994 APBA3O96018 575 aa9.28□□□□□ -0.92
GPNMB-208ENST00000470994 LAMC2Q13753 1193 aa9.28□□□□□ -0.92
GPNMB-208ENST00000470994 TRIM11Q96F44 468 aa9.28□□□□□ -0.92
GPNMB-208ENST00000470994 BCANQ96GW7 911 aa9.28□□□□□ -0.92
GPNMB-208ENST00000470994 LMTK3Q96Q04 1460 aa9.28□□□□□ -0.92
GPNMB-208ENST00000470994 HECW1Q76N89 1606 aa9.27□□□□□ -0.92
GPNMB-208ENST00000470994 ARHGAP5Q13017 1502 aa9.27□□□□□ -0.93
GPNMB-208ENST00000470994 SCO2A0A1W2PP80 73 aa9.27□□□□□ -0.93
GPNMB-208ENST00000470994 HNRNPMP52272 730 aaKnown RBP eCLIP9.27□□□□□ -0.93
GPNMB-208ENST00000470994 PCBP4P57723 403 aaKnown RBP9.27□□□□□ -0.93
GPNMB-208ENST00000470994 TSGA10IPQ3SY00 556 aa9.27□□□□□ -0.93
GPNMB-208ENST00000470994 SAMD5Q5TGI4 173 aa9.27□□□□□ -0.93
GPNMB-208ENST00000470994 MARK1Q9P0L2 795 aa9.27□□□□□ -0.93
GPNMB-208ENST00000470994 KLF15Q9UIH9 416 aa9.27□□□□□ -0.93
GPNMB-208ENST00000470994 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.93
GPNMB-208ENST00000470994 C9orf84Q5VXU9 1444 aa9.27□□□□□ -0.93
GPNMB-208ENST00000470994 PCF11O94913 1555 aaKnown RBP9.27□□□□□ -0.93
GPNMB-208ENST00000470994 BCORL1Q5H9F3 1711 aa9.27□□□□□ -0.93
GPNMB-208ENST00000470994 ELOA3CA0A087WX78 387 aaPredicted RBP9.26□□□□□ -0.93
GPNMB-208ENST00000470994 ELOA3DA6NLF2 546 aaPredicted RBP9.26□□□□□ -0.93
GPNMB-208ENST00000470994 ITGB7P26010 798 aa9.26□□□□□ -0.93
GPNMB-208ENST00000470994 ELOA3BQ3SY89 546 aa9.26□□□□□ -0.93
GPNMB-208ENST00000470994 BICDL1Q6ZP65 573 aa9.26□□□□□ -0.93
GPNMB-208ENST00000470994 ELOA3Q8NG57 546 aa9.26□□□□□ -0.93
GPNMB-208ENST00000470994 CFDP1Q9UEE9 299 aaPredicted RBP9.26□□□□□ -0.93
GPNMB-208ENST00000470994 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
GPNMB-208ENST00000470994 CFAP74Q9C0B2 1584 aa9.25□□□□□ -0.93
GPNMB-208ENST00000470994 CDK2AP1O14519 115 aa9.25□□□□□ -0.93
GPNMB-208ENST00000470994 CABP1Q9NZU7 370 aa9.25□□□□□ -0.93
GPNMB-208ENST00000470994 CASKIN1Q8WXD9 1431 aa9.24□□□□□ -0.93
GPNMB-208ENST00000470994 TRAPPC8Q9Y2L5 1435 aa9.24□□□□□ -0.93
GPNMB-208ENST00000470994 RIMS1Q86UR5 1692 aaKnown RBP9.24□□□□□ -0.93
GPNMB-208ENST00000470994 ZNF518AQ6AHZ1 1483 aa9.24□□□□□ -0.93
GPNMB-208ENST00000470994 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
GPNMB-208ENST00000470994 ZIC5Q96T25 663 aa9.24□□□□□ -0.93
GPNMB-208ENST00000470994 SERTAD1Q9UHV2 236 aa9.24□□□□□ -0.93
GPNMB-208ENST00000470994 ZMYM4Q5VZL5 1548 aa9.24□□□□□ -0.93
GPNMB-208ENST00000470994 SPAG9O60271 1321 aaKnown RBP9.24□□□□□ -0.93
GPNMB-208ENST00000470994 A6NJY4 79 aa9.23□□□□□ -0.93
GPNMB-208ENST00000470994 SLC4A9Q96Q91 983 aa9.23□□□□□ -0.93
GPNMB-208ENST00000470994 MTFR1Q15390 333 aa9.22□□□□□ -0.93
GPNMB-208ENST00000470994 RSPO4Q2I0M5 234 aaPredicted RBP9.22□□□□□ -0.93
GPNMB-208ENST00000470994 GGT6Q6P531 493 aa9.22□□□□□ -0.93
GPNMB-208ENST00000470994 PLPP7Q8NBV4 271 aa9.22□□□□□ -0.93
GPNMB-208ENST00000470994 RICTORQ6R327 1708 aa9.22□□□□□ -0.93
GPNMB-208ENST00000470994 KIF14Q15058 1648 aa9.21□□□□□ -0.93
GPNMB-208ENST00000470994 EFSO43281 561 aa9.21□□□□□ -0.94
GPNMB-208ENST00000470994 SYT9Q86SS6 491 aa9.21□□□□□ -0.94
GPNMB-208ENST00000470994 CCNB3Q8WWL7 1395 aa9.21□□□□□ -0.94
GPNMB-208ENST00000470994 UHRF1BP1Q6BDS2 1440 aa9.21□□□□□ -0.94
GPNMB-208ENST00000470994 BACH1O14867 736 aa9.2□□□□□ -0.94
GPNMB-208ENST00000470994 NEUROD1Q13562 356 aa9.2□□□□□ -0.94
GPNMB-208ENST00000470994 ZNF295-AS1Q8N0V1 137 aa9.2□□□□□ -0.94
GPNMB-208ENST00000470994 NEUROD4Q9HD90 331 aa9.2□□□□□ -0.94
GPNMB-208ENST00000470994 IQSEC3Q9UPP2 1182 aaPredicted RBP9.2□□□□□ -0.94
GPNMB-208ENST00000470994 MTUS2Q5JR59 1369 aa9.2□□□□□ -0.94
GPNMB-208ENST00000470994 CCDC18Q5T9S5 1454 aa9.2□□□□□ -0.94
GPNMB-208ENST00000470994 ARHGEF12Q9NZN5 1544 aa9.2□□□□□ -0.94
GPNMB-208ENST00000470994 SIN3BO75182 1162 aa9.19□□□□□ -0.94
GPNMB-208ENST00000470994 SOX11P35716 441 aa9.19□□□□□ -0.94
GPNMB-208ENST00000470994 WASHC4Q2M389 1173 aa9.19□□□□□ -0.94
GPNMB-208ENST00000470994 NKAPLQ5M9Q1 402 aa9.19□□□□□ -0.94
GPNMB-208ENST00000470994 HCN2Q9UL51 889 aa9.19□□□□□ -0.94
GPNMB-208ENST00000470994 ZNF644Q9H582 1327 aaPredicted RBP9.19□□□□□ -0.94
GPNMB-208ENST00000470994 MLH3Q9UHC1 1453 aa9.19□□□□□ -0.94
GPNMB-208ENST00000470994 TMEM229AB2RXF0 380 aa9.18□□□□□ -0.94
GPNMB-208ENST00000470994 VAC14Q08AM6 782 aa9.18□□□□□ -0.94
GPNMB-208ENST00000470994 TRIM28Q13263 835 aaKnown RBP9.18□□□□□ -0.94
GPNMB-208ENST00000470994 SEMA3FQ13275 785 aa9.18□□□□□ -0.94
GPNMB-208ENST00000470994 IRF5Q13568 498 aa9.18□□□□□ -0.94
GPNMB-208ENST00000470994 KRTAP9-2Q9BYQ4 174 aa9.18□□□□□ -0.94
GPNMB-208ENST00000470994 PRDM6Q9NQX0 595 aa9.18□□□□□ -0.94
GPNMB-208ENST00000470994 STRN4Q9NRL3 753 aa9.18□□□□□ -0.94
GPNMB-208ENST00000470994 TPSG1Q9NRR2 321 aa9.18□□□□□ -0.94
GPNMB-208ENST00000470994 GPC6Q9Y625 555 aaPredicted RBP9.18□□□□□ -0.94
GPNMB-208ENST00000470994 ZMYM3Q14202 1370 aa9.17□□□□□ -0.94
GPNMB-208ENST00000470994 ADARB2-AS1A8MUL3 147 aa9.17□□□□□ -0.94
GPNMB-208ENST00000470994 M0R082 166 aa9.17□□□□□ -0.94
GPNMB-208ENST00000470994 DYRK3O43781 588 aa9.17□□□□□ -0.94
GPNMB-208ENST00000470994 ZNF417Q8TAU3 575 aa9.17□□□□□ -0.94
GPNMB-208ENST00000470994 ZNF587Q96SQ5 575 aaPredicted RBP9.17□□□□□ -0.94
GPNMB-208ENST00000470994 ZFP64Q9NPA5 681 aa9.17□□□□□ -0.94
GPNMB-208ENST00000470994 GPATCH8Q9UKJ3 1502 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms