RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 LRP10Q7Z4F1 713 aa17.79■□□□□ 0.44
ABCA4-204ENST00000470771 CRAMP1Q96RY5 1269 aa17.79■□□□□ 0.44
ABCA4-204ENST00000470771 TNRC6CQ9HCJ0 1690 aaKnown RBP17.78■□□□□ 0.44
ABCA4-204ENST00000470771 IQCA1LA6NCM1 817 aa17.78■□□□□ 0.44
ABCA4-204ENST00000470771 APAF1O14727 1248 aa17.78■□□□□ 0.44
ABCA4-204ENST00000470771 NTSR2O95665 410 aa17.78■□□□□ 0.44
ABCA4-204ENST00000470771 ANXA1P04083 346 aa17.78■□□□□ 0.44
ABCA4-204ENST00000470771 GNAI1P63096 354 aa17.78■□□□□ 0.44
ABCA4-204ENST00000470771 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
ABCA4-204ENST00000470771 SLC10A5Q5PT55 438 aa17.78■□□□□ 0.44
ABCA4-204ENST00000470771 SYNE4Q8N205 404 aa17.78■□□□□ 0.44
ABCA4-204ENST00000470771 JDP2Q8WYK2 163 aa17.78■□□□□ 0.44
ABCA4-204ENST00000470771 ZNF277Q9NRM2 450 aaPredicted RBP17.78■□□□□ 0.44
ABCA4-204ENST00000470771 HYPKQ9NX55 129 aa17.78■□□□□ 0.44
ABCA4-204ENST00000470771 PSMD1Q99460 953 aa17.77■□□□□ 0.44
ABCA4-204ENST00000470771 IFT57Q9NWB7 429 aa17.77■□□□□ 0.44
ABCA4-204ENST00000470771 CHPF2Q9P2E5 772 aa17.77■□□□□ 0.44
ABCA4-204ENST00000470771 RIC1Q4ADV7 1423 aa17.77■□□□□ 0.44
ABCA4-204ENST00000470771 NUP98P52948 1817 aa17.77■□□□□ 0.43
ABCA4-204ENST00000470771 FER1L6Q2WGJ9 1857 aa17.76■□□□□ 0.43
ABCA4-204ENST00000470771 DDNO94850 711 aaPredicted RBP17.76■□□□□ 0.43
ABCA4-204ENST00000470771 DUSP27Q5VZP5 1158 aa17.76■□□□□ 0.43
ABCA4-204ENST00000470771 ANKRD13DQ6ZTN6 518 aa17.76■□□□□ 0.43
ABCA4-204ENST00000470771 TRMT112Q9UI30 125 aaKnown RBP17.76■□□□□ 0.43
ABCA4-204ENST00000470771 ABCC12Q96J65 1359 aa17.76■□□□□ 0.43
ABCA4-204ENST00000470771 IARSP41252 1262 aaKnown RBP17.75■□□□□ 0.43
ABCA4-204ENST00000470771 KRT24Q2M2I5 525 aa17.75■□□□□ 0.43
ABCA4-204ENST00000470771 NLRP10Q86W26 655 aa17.75■□□□□ 0.43
ABCA4-204ENST00000470771 PLBD2Q8NHP8 589 aa17.75■□□□□ 0.43
ABCA4-204ENST00000470771 MBIPQ9NS73 344 aa17.75■□□□□ 0.43
ABCA4-204ENST00000470771 CCDC88AQ3V6T2 1871 aa17.75■□□□□ 0.43
ABCA4-204ENST00000470771 SH3TC1Q8TE82 1336 aa17.74■□□□□ 0.43
ABCA4-204ENST00000470771 POTECB2RU33 542 aa17.74■□□□□ 0.43
ABCA4-204ENST00000470771 PPEF1O14829 653 aaPredicted RBP17.74■□□□□ 0.43
ABCA4-204ENST00000470771 BBOX1O75936 387 aa17.74■□□□□ 0.43
ABCA4-204ENST00000470771 OLFM4Q6UX06 510 aa17.74■□□□□ 0.43
ABCA4-204ENST00000470771 DNAJC5GQ8N7S2 189 aa17.74■□□□□ 0.43
ABCA4-204ENST00000470771 ZNF853P0CG23 659 aa17.73■□□□□ 0.43
ABCA4-204ENST00000470771 DDX46Q7L014 1031 aaKnown RBP17.73■□□□□ 0.43
ABCA4-204ENST00000470771 TIAM2Q8IVF5 1701 aa17.72■□□□□ 0.43
ABCA4-204ENST00000470771 ARFGEF2Q9Y6D5 1785 aa17.72■□□□□ 0.43
ABCA4-204ENST00000470771 TCERG1O14776 1098 aaKnown RBP17.72■□□□□ 0.43
ABCA4-204ENST00000470771 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
ABCA4-204ENST00000470771 EIF6P56537 245 aaKnown RBP17.72■□□□□ 0.43
ABCA4-204ENST00000470771 CHADLQ6NUI6 762 aa17.72■□□□□ 0.43
ABCA4-204ENST00000470771 L3MBTL3Q96JM7 780 aaPredicted RBP17.72■□□□□ 0.43
ABCA4-204ENST00000470771 VPS33BQ9H267 617 aa17.72■□□□□ 0.43
ABCA4-204ENST00000470771 DICER1Q9UPY3 1922 aaKnown RBP17.71■□□□□ 0.43
ABCA4-204ENST00000470771 ANP32CO43423 234 aa17.71■□□□□ 0.43
ABCA4-204ENST00000470771 HCLS1P14317 486 aaPredicted RBP17.71■□□□□ 0.43
ABCA4-204ENST00000470771 GOLGA2Q08379 1002 aa17.71■□□□□ 0.43
ABCA4-204ENST00000470771 GPC2Q8N158 579 aa17.71■□□□□ 0.43
ABCA4-204ENST00000470771 LARGE2Q8N3Y3 721 aa17.71■□□□□ 0.43
ABCA4-204ENST00000470771 SUPT20HQ8NEM7 779 aa17.71■□□□□ 0.43
ABCA4-204ENST00000470771 ATP6V0A2Q9Y487 856 aa17.71■□□□□ 0.43
ABCA4-204ENST00000470771 CACNA1SQ13698 1873 aa17.71■□□□□ 0.43
ABCA4-204ENST00000470771 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
ABCA4-204ENST00000470771 FZD9O00144 591 aa17.7■□□□□ 0.42
ABCA4-204ENST00000470771 RIC3Q7Z5B4 369 aa17.7■□□□□ 0.42
ABCA4-204ENST00000470771 PNMA8AQ86V59 439 aaPredicted RBP17.7■□□□□ 0.42
ABCA4-204ENST00000470771 KLRG1Q96E93 195 aa17.7■□□□□ 0.42
ABCA4-204ENST00000470771 HACL1Q9UJ83 578 aa17.7■□□□□ 0.42
ABCA4-204ENST00000470771 WDR90Q96KV7 1748 aa17.69■□□□□ 0.42
ABCA4-204ENST00000470771 ELL2O00472 640 aaPredicted RBP17.69■□□□□ 0.42
ABCA4-204ENST00000470771 TRIM28Q13263 835 aaKnown RBP17.69■□□□□ 0.42
ABCA4-204ENST00000470771 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
ABCA4-204ENST00000470771 C3orf67Q6ZVT6 689 aa17.69■□□□□ 0.42
ABCA4-204ENST00000470771 TMC4Q7Z404 712 aa17.69■□□□□ 0.42
ABCA4-204ENST00000470771 LDHDQ86WU2 507 aa17.69■□□□□ 0.42
ABCA4-204ENST00000470771 TAF1DQ9H5J8 278 aaPredicted RBP17.69■□□□□ 0.42
ABCA4-204ENST00000470771 PCNTO95613 3336 aa17.69■□□□□ 0.42
ABCA4-204ENST00000470771 DDX58O95786 925 aaKnown RBP17.68■□□□□ 0.42
ABCA4-204ENST00000470771 DPP8Q6V1X1 898 aaPredicted RBP17.68■□□□□ 0.42
ABCA4-204ENST00000470771 SP8Q8IXZ3 490 aa17.68■□□□□ 0.42
ABCA4-204ENST00000470771 NIM1KQ8IY84 436 aa17.68■□□□□ 0.42
ABCA4-204ENST00000470771 ATP5J2-PTCD1G3V325 749 aa17.67■□□□□ 0.42
ABCA4-204ENST00000470771 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
ABCA4-204ENST00000470771 HTRA3P83110 453 aa17.67■□□□□ 0.42
ABCA4-204ENST00000470771 GRAPQ13588 217 aa17.67■□□□□ 0.42
ABCA4-204ENST00000470771 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
ABCA4-204ENST00000470771 GRAPLQ8TC17 118 aaPredicted RBP17.67■□□□□ 0.42
ABCA4-204ENST00000470771 ISCA1Q9BUE6 129 aa17.67■□□□□ 0.42
ABCA4-204ENST00000470771 CLEC11AQ9Y240 323 aa17.67■□□□□ 0.42
ABCA4-204ENST00000470771 GJA3Q9Y6H8 435 aa17.67■□□□□ 0.42
ABCA4-204ENST00000470771 ABCC4O15439 1325 aa17.67■□□□□ 0.42
ABCA4-204ENST00000470771 ZNF541Q9H0D2 1346 aa17.67■□□□□ 0.42
ABCA4-204ENST00000470771 PPIP5K2O43314 1243 aa17.66■□□□□ 0.42
ABCA4-204ENST00000470771 EPHX2P34913 555 aa17.66■□□□□ 0.42
ABCA4-204ENST00000470771 EAPPQ56P03 285 aaPredicted RBP17.66■□□□□ 0.42
ABCA4-204ENST00000470771 MPNDQ8N594 471 aa17.66■□□□□ 0.42
ABCA4-204ENST00000470771 FAM89AQ96GI7 184 aa17.66■□□□□ 0.42
ABCA4-204ENST00000470771 MRS2Q9HD23 443 aa17.66■□□□□ 0.42
ABCA4-204ENST00000470771 NCBP3Q53F19 620 aaKnown RBP17.65■□□□□ 0.42
ABCA4-204ENST00000470771 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
ABCA4-204ENST00000470771 STK31Q9BXU1 1019 aa17.64■□□□□ 0.41
ABCA4-204ENST00000470771 RTFDC1Q9BY42 306 aaPredicted RBP17.64■□□□□ 0.41
ABCA4-204ENST00000470771 ZNRF3Q9ULT6 936 aa17.64■□□□□ 0.41
ABCA4-204ENST00000470771 IRS4O14654 1257 aaPredicted RBP17.63■□□□□ 0.41
ABCA4-204ENST00000470771 SF3B3Q15393 1217 aaKnown RBP17.63■□□□□ 0.41
ABCA4-204ENST00000470771 WWC1Q8IX03 1113 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms