RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 SLC4A10Q6U841 1118 aa12.29□□□□□ -0.44
NXF3-205ENST00000470724 JARID2Q92833 1246 aaPredicted RBP12.29□□□□□ -0.44
NXF3-205ENST00000470724 MASTLQ96GX5 879 aa12.29□□□□□ -0.44
NXF3-205ENST00000470724 YTHDC1Q96MU7 727 aaKnown RBP12.29□□□□□ -0.44
NXF3-205ENST00000470724 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
NXF3-205ENST00000470724 METTL22Q9BUU2 404 aaPredicted RBP12.29□□□□□ -0.44
NXF3-205ENST00000470724 CWC25Q9NXE8 425 aaPredicted RBP12.29□□□□□ -0.44
NXF3-205ENST00000470724 SH3TC1Q8TE82 1336 aa12.29□□□□□ -0.44
NXF3-205ENST00000470724 ABCC12Q96J65 1359 aa12.29□□□□□ -0.44
NXF3-205ENST00000470724 F6X3S4 739 aa12.28□□□□□ -0.44
NXF3-205ENST00000470724 NPR1P16066 1061 aa12.28□□□□□ -0.44
NXF3-205ENST00000470724 KCNA3P22001 575 aa12.28□□□□□ -0.44
NXF3-205ENST00000470724 YY1P25490 414 aa12.28□□□□□ -0.44
NXF3-205ENST00000470724 DNAAF4Q8WXU2 420 aa12.28□□□□□ -0.44
NXF3-205ENST00000470724 CNKSR1Q969H4 720 aa12.28□□□□□ -0.44
NXF3-205ENST00000470724 FAM89AQ96GI7 184 aa12.28□□□□□ -0.44
NXF3-205ENST00000470724 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
NXF3-205ENST00000470724 ISCA1Q9BUE6 129 aa12.28□□□□□ -0.44
NXF3-205ENST00000470724 CWF19L2Q2TBE0 894 aaKnown RBP12.27□□□□□ -0.45
NXF3-205ENST00000470724 STYK1Q6J9G0 422 aa12.27□□□□□ -0.45
NXF3-205ENST00000470724 SYNE4Q8N205 404 aa12.27□□□□□ -0.45
NXF3-205ENST00000470724 SSH1Q8WYL5 1049 aa12.27□□□□□ -0.45
NXF3-205ENST00000470724 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.45
NXF3-205ENST00000470724 IBTKQ9P2D0 1353 aaPredicted RBP12.27□□□□□ -0.45
NXF3-205ENST00000470724 IRS4O14654 1257 aaPredicted RBP12.26□□□□□ -0.45
NXF3-205ENST00000470724 C21orf2O43822 256 aa12.26□□□□□ -0.45
NXF3-205ENST00000470724 SRGNP10124 158 aa12.26□□□□□ -0.45
NXF3-205ENST00000470724 PRPF40BQ6NWY9 871 aaKnown RBP12.26□□□□□ -0.45
NXF3-205ENST00000470724 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
NXF3-205ENST00000470724 CCDC191Q8NCU4 936 aa12.26□□□□□ -0.45
NXF3-205ENST00000470724 ZBED9Q6R2W3 1325 aa12.26□□□□□ -0.45
NXF3-205ENST00000470724 ADCY9O60503 1353 aa12.26□□□□□ -0.45
NXF3-205ENST00000470724 HSP90B1P14625 803 aaKnown RBP12.25□□□□□ -0.45
NXF3-205ENST00000470724 ALDH1B1P30837 517 aa12.25□□□□□ -0.45
NXF3-205ENST00000470724 C3orf67Q6ZVT6 689 aa12.25□□□□□ -0.45
NXF3-205ENST00000470724 DDX46Q7L014 1031 aaKnown RBP12.25□□□□□ -0.45
NXF3-205ENST00000470724 CCDC85AQ96PX6 553 aaPredicted RBP12.25□□□□□ -0.45
NXF3-205ENST00000470724 RNF123Q5XPI4 1314 aa12.25□□□□□ -0.45
NXF3-205ENST00000470724 CT47B1P0C2W7 299 aaPredicted RBP12.24□□□□□ -0.45
NXF3-205ENST00000470724 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
NXF3-205ENST00000470724 ALDH1L2Q3SY69 923 aa12.24□□□□□ -0.45
NXF3-205ENST00000470724 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
NXF3-205ENST00000470724 TRMT2AQ8IZ69 625 aaKnown RBP12.24□□□□□ -0.45
NXF3-205ENST00000470724 ZBTB38Q8NAP3 1195 aaPredicted RBP12.24□□□□□ -0.45
NXF3-205ENST00000470724 NEURL1BA8MQ27 555 aa12.23□□□□□ -0.45
NXF3-205ENST00000470724 PCCAP05165 728 aaPredicted RBP12.23□□□□□ -0.45
NXF3-205ENST00000470724 IGKV5-2P06315 115 aa12.23□□□□□ -0.45
NXF3-205ENST00000470724 RASSF7Q02833 373 aa12.23□□□□□ -0.45
NXF3-205ENST00000470724 SLC10A5Q5PT55 438 aa12.23□□□□□ -0.45
NXF3-205ENST00000470724 UBE3BQ7Z3V4 1068 aa12.23□□□□□ -0.45
NXF3-205ENST00000470724 FRAT1Q92837 279 aaPredicted RBP12.23□□□□□ -0.45
NXF3-205ENST00000470724 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
NXF3-205ENST00000470724 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
NXF3-205ENST00000470724 PPEF1O14829 653 aaPredicted RBP12.22□□□□□ -0.45
NXF3-205ENST00000470724 SOGA3Q5TF21 947 aa12.22□□□□□ -0.45
NXF3-205ENST00000470724 LINS1Q8NG48 757 aa12.22□□□□□ -0.45
NXF3-205ENST00000470724 SRCIN1Q9C0H9 1055 aa12.22□□□□□ -0.45
NXF3-205ENST00000470724 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
NXF3-205ENST00000470724 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
NXF3-205ENST00000470724 CHMP3Q9Y3E7 222 aa12.22□□□□□ -0.45
NXF3-205ENST00000470724 PTPRCP08575 1304 aa12.21□□□□□ -0.45
NXF3-205ENST00000470724 KLRG2A4D1S0 409 aaPredicted RBP12.21□□□□□ -0.45
NXF3-205ENST00000470724 RARSP54136 660 aaKnown RBP12.21□□□□□ -0.45
NXF3-205ENST00000470724 GCKRQ14397 625 aa12.21□□□□□ -0.45
NXF3-205ENST00000470724 CCDC152Q4G0S7 254 aa12.21□□□□□ -0.45
NXF3-205ENST00000470724 CCDC93Q567U6 631 aa12.21□□□□□ -0.45
NXF3-205ENST00000470724 ZNF526Q8TF50 670 aaPredicted RBP12.21□□□□□ -0.45
NXF3-205ENST00000470724 RNF181Q9P0P0 153 aa12.21□□□□□ -0.45
NXF3-205ENST00000470724 NUP98P52948 1817 aa12.21□□□□□ -0.46
NXF3-205ENST00000470724 ABCC4O15439 1325 aa12.2□□□□□ -0.46
NXF3-205ENST00000470724 PDE8AO60658 829 aa12.2□□□□□ -0.46
NXF3-205ENST00000470724 CRY2Q49AN0 593 aa12.2□□□□□ -0.46
NXF3-205ENST00000470724 BEND3Q5T5X7 828 aa12.2□□□□□ -0.46
NXF3-205ENST00000470724 C9orf131Q5VYM1 1079 aa12.2□□□□□ -0.46
NXF3-205ENST00000470724 OLFM4Q6UX06 510 aa12.2□□□□□ -0.46
NXF3-205ENST00000470724 CRAMP1Q96RY5 1269 aa12.2□□□□□ -0.46
NXF3-205ENST00000470724 KIF13BQ9NQT8 1826 aa12.19□□□□□ -0.46
NXF3-205ENST00000470724 BCAR3O75815 825 aa12.19□□□□□ -0.46
NXF3-205ENST00000470724 HOXA10P31260 410 aaPredicted RBP12.19□□□□□ -0.46
NXF3-205ENST00000470724 GRAPQ13588 217 aa12.19□□□□□ -0.46
NXF3-205ENST00000470724 GRAPLQ8TC17 118 aaPredicted RBP12.19□□□□□ -0.46
NXF3-205ENST00000470724 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
NXF3-205ENST00000470724 TAOK3Q9H2K8 898 aa12.19□□□□□ -0.46
NXF3-205ENST00000470724 RIC1Q4ADV7 1423 aa12.19□□□□□ -0.46
NXF3-205ENST00000470724 ARFGEF2Q9Y6D5 1785 aa12.18□□□□□ -0.46
NXF3-205ENST00000470724 KIF16BQ96L93 1317 aa12.18□□□□□ -0.46
NXF3-205ENST00000470724 CDHR2Q9BYE9 1310 aa12.18□□□□□ -0.46
NXF3-205ENST00000470724 KIAA1551Q9HCM1 1747 aa12.18□□□□□ -0.46
NXF3-205ENST00000470724 IPO8O15397 1037 aaKnown RBP12.18□□□□□ -0.46
NXF3-205ENST00000470724 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
NXF3-205ENST00000470724 CTSWP56202 376 aa12.18□□□□□ -0.46
NXF3-205ENST00000470724 RTKN2Q8IZC4 609 aa12.18□□□□□ -0.46
NXF3-205ENST00000470724 TNRC6CQ9HCJ0 1690 aaKnown RBP12.18□□□□□ -0.46
NXF3-205ENST00000470724 H7C1W4 665 aa12.17□□□□□ -0.46
NXF3-205ENST00000470724 NFKBIEO00221 500 aa12.17□□□□□ -0.46
NXF3-205ENST00000470724 GRM8O00222 908 aa12.17□□□□□ -0.46
NXF3-205ENST00000470724 BBOX1O75936 387 aa12.17□□□□□ -0.46
NXF3-205ENST00000470724 LMNB1P20700 586 aa12.17□□□□□ -0.46
NXF3-205ENST00000470724 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
NXF3-205ENST00000470724 CELF1Q92879 486 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms