RNA–Protein interactions for RNA: ENST00000470695.1

IFT88-205, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-205ENST00000470695 PCCAP05165 728 aaPredicted RBP15.64■□□□□ 0.09
IFT88-205ENST00000470695 ATP8B2P98198 1209 aa15.64■□□□□ 0.09
IFT88-205ENST00000470695 EN1Q05925 392 aaPredicted RBP15.64■□□□□ 0.09
IFT88-205ENST00000470695 MTX1Q13505 466 aa15.64■□□□□ 0.09
IFT88-205ENST00000470695 EZH2Q15910 746 aaKnown RBP15.64■□□□□ 0.09
IFT88-205ENST00000470695 AMIGO3Q86WK7 504 aa15.64■□□□□ 0.09
IFT88-205ENST00000470695 FLAD1Q8NFF5 587 aa15.64■□□□□ 0.09
IFT88-205ENST00000470695 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
IFT88-205ENST00000470695 C4AP0C0L4 1744 aa15.63■□□□□ 0.09
IFT88-205ENST00000470695 SIRT2Q8IXJ6 389 aa15.63■□□□□ 0.09
IFT88-205ENST00000470695 ZBTB38Q8NAP3 1195 aaPredicted RBP15.63■□□□□ 0.09
IFT88-205ENST00000470695 BCL2L12Q9HB09 334 aa15.63■□□□□ 0.09
IFT88-205ENST00000470695 ZNF827Q17R98 1081 aa15.62■□□□□ 0.09
IFT88-205ENST00000470695 USPL1Q5W0Q7 1092 aa15.62■□□□□ 0.09
IFT88-205ENST00000470695 UBE3BQ7Z3V4 1068 aa15.62■□□□□ 0.09
IFT88-205ENST00000470695 SUCLG2Q96I99 432 aa15.62■□□□□ 0.09
IFT88-205ENST00000470695 UBN2Q6ZU65 1347 aa15.62■□□□□ 0.09
IFT88-205ENST00000470695 CDHR2Q9BYE9 1310 aa15.62■□□□□ 0.09
IFT88-205ENST00000470695 PHF14O94880 888 aa15.61■□□□□ 0.09
IFT88-205ENST00000470695 GPTP24298 496 aa15.61■□□□□ 0.09
IFT88-205ENST00000470695 PPP1R42Q7Z4L9 355 aa15.61■□□□□ 0.09
IFT88-205ENST00000470695 GCC1Q96CN9 775 aa15.61■□□□□ 0.09
IFT88-205ENST00000470695 KAZALD1Q96I82 304 aa15.61■□□□□ 0.09
IFT88-205ENST00000470695 PLA2G12BQ9BX93 195 aa15.61■□□□□ 0.09
IFT88-205ENST00000470695 TFCP2L1Q9NZI6 479 aa15.61■□□□□ 0.09
IFT88-205ENST00000470695 NIP7Q9Y221 180 aaKnown RBP eCLIP15.61■□□□□ 0.09
IFT88-205ENST00000470695 POLA2Q14181 598 aa15.6■□□□□ 0.09
IFT88-205ENST00000470695 RABL6Q3YEC7 729 aaPredicted RBP15.6■□□□□ 0.09
IFT88-205ENST00000470695 SMIM5Q71RC9 77 aa15.6■□□□□ 0.09
IFT88-205ENST00000470695 SMC5Q8IY18 1101 aa15.6■□□□□ 0.09
IFT88-205ENST00000470695 SSH3Q8TE77 659 aa15.6■□□□□ 0.09
IFT88-205ENST00000470695 UTP14AQ9BVJ6 771 aaKnown RBP15.6■□□□□ 0.09
IFT88-205ENST00000470695 SRP68Q9UHB9 627 aaKnown RBP15.6■□□□□ 0.09
IFT88-205ENST00000470695 EP400Q96L91 3159 aa15.6■□□□□ 0.09
IFT88-205ENST00000470695 HSP90B1P14625 803 aaKnown RBP15.59■□□□□ 0.09
IFT88-205ENST00000470695 SUSD4Q5VX71 490 aa15.59■□□□□ 0.09
IFT88-205ENST00000470695 BICC1Q9H694 974 aaKnown RBP15.59■□□□□ 0.09
IFT88-205ENST00000470695 DCTPP1Q9H773 170 aa15.59■□□□□ 0.09
IFT88-205ENST00000470695 TRMT112Q9UI30 125 aaKnown RBP15.59■□□□□ 0.09
IFT88-205ENST00000470695 QSER1Q2KHR3 1735 aa15.58■□□□□ 0.08
IFT88-205ENST00000470695 SLC15A2Q16348 729 aa15.58■□□□□ 0.08
IFT88-205ENST00000470695 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.08
IFT88-205ENST00000470695 DEFB132Q7Z7B7 95 aa15.58■□□□□ 0.08
IFT88-205ENST00000470695 SETDB2Q96T68 719 aa15.58■□□□□ 0.08
IFT88-205ENST00000470695 STK32BQ9NY57 414 aa15.58■□□□□ 0.08
IFT88-205ENST00000470695 SH3TC1Q8TE82 1336 aa15.58■□□□□ 0.08
IFT88-205ENST00000470695 PNMA6EA0A0J9YXQ4 647 aa15.57■□□□□ 0.08
IFT88-205ENST00000470695 NTSR2O95665 410 aa15.57■□□□□ 0.08
IFT88-205ENST00000470695 GYS1P13807 737 aa15.57■□□□□ 0.08
IFT88-205ENST00000470695 FOXO4P98177 505 aa15.57■□□□□ 0.08
IFT88-205ENST00000470695 COL23A1Q86Y22 540 aaPredicted RBP15.57■□□□□ 0.08
IFT88-205ENST00000470695 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
IFT88-205ENST00000470695 NYXQ9GZU5 481 aa15.57■□□□□ 0.08
IFT88-205ENST00000470695 COL24A1Q17RW2 1714 aa15.57■□□□□ 0.08
IFT88-205ENST00000470695 IRS4O14654 1257 aaPredicted RBP15.56■□□□□ 0.08
IFT88-205ENST00000470695 SRGAP3O43295 1099 aa15.56■□□□□ 0.08
IFT88-205ENST00000470695 EPHA10Q5JZY3 1008 aa15.56■□□□□ 0.08
IFT88-205ENST00000470695 JARID2Q92833 1246 aaPredicted RBP15.56■□□□□ 0.08
IFT88-205ENST00000470695 PNPLA7Q6ZV29 1317 aa15.56■□□□□ 0.08
IFT88-205ENST00000470695 TUBGCP6Q96RT7 1819 aa15.56■□□□□ 0.08
IFT88-205ENST00000470695 PDE8AO60658 829 aa15.55■□□□□ 0.08
IFT88-205ENST00000470695 CSF1RP07333 972 aa15.55■□□□□ 0.08
IFT88-205ENST00000470695 NLGN1Q8N2Q7 840 aa15.55■□□□□ 0.08
IFT88-205ENST00000470695 UPF1Q92900 1129 aaKnown RBP eCLIP15.55■□□□□ 0.08
IFT88-205ENST00000470695 CARMIL3Q8ND23 1372 aa15.54■□□□□ 0.08
IFT88-205ENST00000470695 TM4SF1P30408 202 aa15.54■□□□□ 0.08
IFT88-205ENST00000470695 NFIXQ14938 502 aa15.54■□□□□ 0.08
IFT88-205ENST00000470695 HSP90AB4PQ58FF6 505 aa15.54■□□□□ 0.08
IFT88-205ENST00000470695 SLC10A5Q5PT55 438 aa15.54■□□□□ 0.08
IFT88-205ENST00000470695 LMBR1LQ6UX01 489 aa15.54■□□□□ 0.08
IFT88-205ENST00000470695 TPTE2Q6XPS3 522 aa15.54■□□□□ 0.08
IFT88-205ENST00000470695 ANO8Q9HCE9 1232 aaPredicted RBP15.54■□□□□ 0.08
IFT88-205ENST00000470695 NOP58Q9Y2X3 529 aaKnown RBP15.54■□□□□ 0.08
IFT88-205ENST00000470695 NUCB1Q02818 461 aa15.53■□□□□ 0.08
IFT88-205ENST00000470695 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
IFT88-205ENST00000470695 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
IFT88-205ENST00000470695 LAMB2P55268 1798 aa15.53■□□□□ 0.08
IFT88-205ENST00000470695 RAB11FIP3O75154 756 aa15.52■□□□□ 0.08
IFT88-205ENST00000470695 RFX5P48382 616 aaPredicted RBP15.52■□□□□ 0.08
IFT88-205ENST00000470695 CTSWP56202 376 aa15.52■□□□□ 0.08
IFT88-205ENST00000470695 NBPF5PQ86XG9 351 aaPredicted RBP15.52■□□□□ 0.08
IFT88-205ENST00000470695 SYNE4Q8N205 404 aa15.52■□□□□ 0.08
IFT88-205ENST00000470695 COPRSQ9NQ92 184 aa15.52■□□□□ 0.08
IFT88-205ENST00000470695 PDZRN3Q9UPQ7 1066 aa15.52■□□□□ 0.08
IFT88-205ENST00000470695 TTLL11Q8NHH1 800 aa15.51■□□□□ 0.07
IFT88-205ENST00000470695 RIC1Q4ADV7 1423 aa15.51■□□□□ 0.07
IFT88-205ENST00000470695 MYH3P11055 1940 aa15.51■□□□□ 0.07
IFT88-205ENST00000470695 FAM177BA6PVY3 158 aa15.5■□□□□ 0.07
IFT88-205ENST00000470695 SURF6O75683 361 aaKnown RBP15.5■□□□□ 0.07
IFT88-205ENST00000470695 GTF2E1P29083 439 aaPredicted RBP15.5■□□□□ 0.07
IFT88-205ENST00000470695 ERFEQ4G0M1 354 aa15.5■□□□□ 0.07
IFT88-205ENST00000470695 CHD1LQ86WJ1 897 aa15.5■□□□□ 0.07
IFT88-205ENST00000470695 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
IFT88-205ENST00000470695 DDX60Q8IY21 1712 aaKnown RBP15.5■□□□□ 0.07
IFT88-205ENST00000470695 RTL9Q8NET4 1388 aa15.49■□□□□ 0.07
IFT88-205ENST00000470695 SERPINB2P05120 415 aa15.49■□□□□ 0.07
IFT88-205ENST00000470695 PTPN12Q05209 780 aaKnown RBP15.49■□□□□ 0.07
IFT88-205ENST00000470695 SF3B3Q15393 1217 aaKnown RBP15.49■□□□□ 0.07
IFT88-205ENST00000470695 CCDC57Q2TAC2 916 aa15.49■□□□□ 0.07
IFT88-205ENST00000470695 ANKRD45Q5TZF3 282 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms