RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SLCO4C1Q6ZQN7 724 aa7.94□□□□□ -1.14
COL9A1-206ENST00000470652 KHNYNO15037 678 aaKnown RBP7.93□□□□□ -1.14
COL9A1-206ENST00000470652 MAPTP10636 758 aaKnown RBP7.93□□□□□ -1.14
COL9A1-206ENST00000470652 EPXP11678 715 aa7.93□□□□□ -1.14
COL9A1-206ENST00000470652 TNP2Q05952 138 aa7.93□□□□□ -1.14
COL9A1-206ENST00000470652 FKBP5Q13451 457 aaPredicted RBP7.93□□□□□ -1.14
COL9A1-206ENST00000470652 CD163Q86VB7 1156 aa7.93□□□□□ -1.14
COL9A1-206ENST00000470652 SUSD3Q96L08 255 aa7.93□□□□□ -1.14
COL9A1-206ENST00000470652 CXXC1Q9P0U4 656 aaPredicted RBP7.93□□□□□ -1.14
COL9A1-206ENST00000470652 DCDC2BA2VCK2 349 aa7.92□□□□□ -1.14
COL9A1-206ENST00000470652 NEURL1BA8MQ27 555 aa7.92□□□□□ -1.14
COL9A1-206ENST00000470652 LAMC2Q13753 1193 aa7.92□□□□□ -1.14
COL9A1-206ENST00000470652 COL26A1Q96A83 441 aa7.92□□□□□ -1.14
COL9A1-206ENST00000470652 TMEM88BA6NKF7 163 aa7.91□□□□□ -1.14
COL9A1-206ENST00000470652 PTCD1O75127 700 aaKnown RBP7.91□□□□□ -1.14
COL9A1-206ENST00000470652 FAM182BQ5T319 152 aa7.91□□□□□ -1.14
COL9A1-206ENST00000470652 MYO19Q96H55 970 aa7.91□□□□□ -1.14
COL9A1-206ENST00000470652 HSH2DQ96JZ2 352 aa7.91□□□□□ -1.14
COL9A1-206ENST00000470652 QTRT2Q9H974 415 aaKnown RBP7.91□□□□□ -1.14
COL9A1-206ENST00000470652 EFSO43281 561 aa7.9□□□□□ -1.14
COL9A1-206ENST00000470652 ARAFP10398 606 aa7.9□□□□□ -1.14
COL9A1-206ENST00000470652 ATP2B4P23634 1241 aa7.9□□□□□ -1.14
COL9A1-206ENST00000470652 ZNF280CQ8ND82 737 aa7.9□□□□□ -1.14
COL9A1-206ENST00000470652 CEP63Q96MT8 703 aa7.9□□□□□ -1.14
COL9A1-206ENST00000470652 MARK1Q9P0L2 795 aa7.9□□□□□ -1.14
COL9A1-206ENST00000470652 CHRNA4P43681 627 aa7.89□□□□□ -1.15
COL9A1-206ENST00000470652 C11orf91Q3C1V1 193 aa7.89□□□□□ -1.15
COL9A1-206ENST00000470652 IER5Q5VY09 327 aa7.89□□□□□ -1.15
COL9A1-206ENST00000470652 NOP53Q9NZM5 478 aaKnown RBP7.89□□□□□ -1.15
COL9A1-206ENST00000470652 SLAIN2Q9P270 581 aa7.89□□□□□ -1.15
COL9A1-206ENST00000470652 USTQ9Y2C2 406 aa7.89□□□□□ -1.15
COL9A1-206ENST00000470652 TGFBR3LH3BV60 316 aa7.88□□□□□ -1.15
COL9A1-206ENST00000470652 CD33P20138 364 aa7.88□□□□□ -1.15
COL9A1-206ENST00000470652 DGKGP49619 791 aa7.88□□□□□ -1.15
COL9A1-206ENST00000470652 DGKZQ13574 1117 aa7.88□□□□□ -1.15
COL9A1-206ENST00000470652 C16orf46Q6P387 395 aa7.88□□□□□ -1.15
COL9A1-206ENST00000470652 BTLAQ7Z6A9 289 aa7.88□□□□□ -1.15
COL9A1-206ENST00000470652 BRD7Q9NPI1 651 aa7.88□□□□□ -1.15
COL9A1-206ENST00000470652 KLK14Q9P0G3 267 aa7.88□□□□□ -1.15
COL9A1-206ENST00000470652 KCNQ4P56696 695 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 TYRO3Q06418 890 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 PDE4CQ08493 712 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 DOC2BQ14184 412 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 COX20Q5RI15 118 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 CHSY3Q70JA7 882 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 MKNK1Q9BUB5 465 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 SEMA6BQ9H3T3 888 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 STRN4Q9NRL3 753 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 HCN2Q9UL51 889 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 LRFN2Q9ULH4 789 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 BCS1LQ9Y276 419 aa7.87□□□□□ -1.15
COL9A1-206ENST00000470652 SSFA2P28290 1259 aa7.86□□□□□ -1.15
COL9A1-206ENST00000470652 AVENQ9NQS1 362 aaPredicted RBP7.86□□□□□ -1.15
COL9A1-206ENST00000470652 DMGDHQ9UI17 866 aaKnown RBP7.86□□□□□ -1.15
COL9A1-206ENST00000470652 PRR12Q9ULL5 1215 aa7.86□□□□□ -1.15
COL9A1-206ENST00000470652 ADH6P28332 368 aa7.85□□□□□ -1.15
COL9A1-206ENST00000470652 SFSWAPQ12872 951 aaKnown RBP7.85□□□□□ -1.15
COL9A1-206ENST00000470652 IFT43Q96FT9 208 aa7.85□□□□□ -1.15
COL9A1-206ENST00000470652 KLF15Q9UIH9 416 aa7.85□□□□□ -1.15
COL9A1-206ENST00000470652 KCNH4Q9UQ05 1017 aa7.85□□□□□ -1.15
COL9A1-206ENST00000470652 MICAL2O94851 1124 aa7.84□□□□□ -1.15
COL9A1-206ENST00000470652 EPB42P16452 691 aa7.84□□□□□ -1.15
COL9A1-206ENST00000470652 BRD2P25440 801 aaKnown RBP7.84□□□□□ -1.15
COL9A1-206ENST00000470652 NAA30Q147X3 362 aaPredicted RBP7.84□□□□□ -1.15
COL9A1-206ENST00000470652 CAPN12Q6ZSI9 719 aa7.84□□□□□ -1.15
COL9A1-206ENST00000470652 PSMG3-AS1Q96PY0 264 aa7.84□□□□□ -1.15
COL9A1-206ENST00000470652 SAP130Q9H0E3 1048 aa7.84□□□□□ -1.15
COL9A1-206ENST00000470652 ITGB7P26010 798 aa7.83□□□□□ -1.16
COL9A1-206ENST00000470652 INPP5BP32019 993 aa7.83□□□□□ -1.16
COL9A1-206ENST00000470652 NEUROD1Q13562 356 aa7.83□□□□□ -1.16
COL9A1-206ENST00000470652 ZNF468Q5VIY5 522 aaPredicted RBP7.83□□□□□ -1.16
COL9A1-206ENST00000470652 FCHSD1Q86WN1 690 aa7.83□□□□□ -1.16
COL9A1-206ENST00000470652 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
COL9A1-206ENST00000470652 CARNS1A5YM72 827 aa7.82□□□□□ -1.16
COL9A1-206ENST00000470652 GATA4P43694 442 aa7.82□□□□□ -1.16
COL9A1-206ENST00000470652 IDH3AP50213 366 aa7.82□□□□□ -1.16
COL9A1-206ENST00000470652 ARSDP51689 593 aa7.82□□□□□ -1.16
COL9A1-206ENST00000470652 PCBP4P57723 403 aaKnown RBP7.82□□□□□ -1.16
COL9A1-206ENST00000470652 B4GALNT3Q6L9W6 998 aa7.82□□□□□ -1.16
COL9A1-206ENST00000470652 RETREG2Q8NC44 543 aa7.82□□□□□ -1.16
COL9A1-206ENST00000470652 EFCC1Q9HA90 598 aa7.82□□□□□ -1.16
COL9A1-206ENST00000470652 C11orf16Q9NQ32 467 aa7.82□□□□□ -1.16
COL9A1-206ENST00000470652 SPEM2Q0P670 501 aa7.81□□□□□ -1.16
COL9A1-206ENST00000470652 TREML1Q86YW5 311 aa7.81□□□□□ -1.16
COL9A1-206ENST00000470652 TRIM11Q96F44 468 aa7.81□□□□□ -1.16
COL9A1-206ENST00000470652 SEPT3Q9UH03 358 aa7.81□□□□□ -1.16
COL9A1-206ENST00000470652 MTMR7Q9Y216 660 aa7.81□□□□□ -1.16
COL9A1-206ENST00000470652 ZMYM1Q5SVZ6 1142 aa7.8□□□□□ -1.16
COL9A1-206ENST00000470652 SYT9Q86SS6 491 aa7.8□□□□□ -1.16
COL9A1-206ENST00000470652 SLC30A3Q99726 388 aa7.8□□□□□ -1.16
COL9A1-206ENST00000470652 STIM2Q9P246 746 aa7.8□□□□□ -1.16
COL9A1-206ENST00000470652 TNFRSF10BO14763 440 aa7.79□□□□□ -1.16
COL9A1-206ENST00000470652 SIN3BO75182 1162 aa7.79□□□□□ -1.16
COL9A1-206ENST00000470652 PHLDB3Q6NSJ2 640 aa7.79□□□□□ -1.16
COL9A1-206ENST00000470652 ETFBKMTQ8IXQ9 262 aa7.79□□□□□ -1.16
COL9A1-206ENST00000470652 OPLAHO14841 1288 aa7.78□□□□□ -1.16
COL9A1-206ENST00000470652 SPATA31C1P0DKV0 1188 aa7.78□□□□□ -1.16
COL9A1-206ENST00000470652 CCINQ13939 588 aa7.78□□□□□ -1.16
COL9A1-206ENST00000470652 ABTB2Q8N961 1025 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms