RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 FLIIQ13045 1269 aa24.72■■□□□ 1.55
PCGF3-208ENST00000470161 FKBP5Q13451 457 aaPredicted RBP24.72■■□□□ 1.55
PCGF3-208ENST00000470161 KSR2Q6VAB6 950 aa24.72■■□□□ 1.55
PCGF3-208ENST00000470161 TTLL6Q8N841 843 aa24.72■■□□□ 1.55
PCGF3-208ENST00000470161 MAP3K2Q9Y2U5 619 aa24.72■■□□□ 1.55
PCGF3-208ENST00000470161 PI4KAP2A4QPH2 592 aa24.71■■□□□ 1.55
PCGF3-208ENST00000470161 NEXNQ0ZGT2 675 aa24.71■■□□□ 1.55
PCGF3-208ENST00000470161 G2E3Q7L622 706 aa24.71■■□□□ 1.55
PCGF3-208ENST00000470161 PI4KAP1Q8N8J0 262 aa24.71■■□□□ 1.55
PCGF3-208ENST00000470161 MYD88Q99836 296 aa24.71■■□□□ 1.55
PCGF3-208ENST00000470161 RCAN3Q9UKA8 241 aa24.7■■□□□ 1.54
PCGF3-208ENST00000470161 KIAA1551Q9HCM1 1747 aa24.69■■□□□ 1.54
PCGF3-208ENST00000470161 MASTLQ96GX5 879 aa24.69■■□□□ 1.54
PCGF3-208ENST00000470161 ISCA1Q9BUE6 129 aa24.69■■□□□ 1.54
PCGF3-208ENST00000470161 METTL22Q9BUU2 404 aaPredicted RBP24.69■■□□□ 1.54
PCGF3-208ENST00000470161 RNF123Q5XPI4 1314 aa24.69■■□□□ 1.54
PCGF3-208ENST00000470161 SRGNP10124 158 aa24.69■■□□□ 1.54
PCGF3-208ENST00000470161 ZNF428Q96B54 188 aa24.69■■□□□ 1.54
PCGF3-208ENST00000470161 TRIM28Q13263 835 aaKnown RBP24.68■■□□□ 1.54
PCGF3-208ENST00000470161 CNKSR1Q969H4 720 aa24.68■■□□□ 1.54
PCGF3-208ENST00000470161 SH3TC1Q8TE82 1336 aa24.68■■□□□ 1.54
PCGF3-208ENST00000470161 NLRP3Q96P20 1036 aa24.67■■□□□ 1.54
PCGF3-208ENST00000470161 NPR1P16066 1061 aa24.66■■□□□ 1.54
PCGF3-208ENST00000470161 STYK1Q6J9G0 422 aa24.66■■□□□ 1.54
PCGF3-208ENST00000470161 ANKRD36CQ5JPF3 1778 aa24.66■■□□□ 1.54
PCGF3-208ENST00000470161 KLRG2A4D1S0 409 aaPredicted RBP24.66■■□□□ 1.54
PCGF3-208ENST00000470161 ARHGAP27Q6ZUM4 889 aa24.66■■□□□ 1.54
PCGF3-208ENST00000470161 CCDC191Q8NCU4 936 aa24.66■■□□□ 1.54
PCGF3-208ENST00000470161 RPGRQ92834 1020 aaKnown RBP24.66■■□□□ 1.54
PCGF3-208ENST00000470161 ABCC12Q96J65 1359 aa24.65■■□□□ 1.54
PCGF3-208ENST00000470161 ANKRD31Q8N7Z5 1873 aa24.65■■□□□ 1.54
PCGF3-208ENST00000470161 ARFGEF2Q9Y6D5 1785 aa24.65■■□□□ 1.54
PCGF3-208ENST00000470161 CT47B1P0C2W7 299 aaPredicted RBP24.65■■□□□ 1.54
PCGF3-208ENST00000470161 FAM89AQ96GI7 184 aa24.64■■□□□ 1.53
PCGF3-208ENST00000470161 CWC25Q9NXE8 425 aaPredicted RBP24.64■■□□□ 1.53
PCGF3-208ENST00000470161 ADCY9O60503 1353 aa24.63■■□□□ 1.53
PCGF3-208ENST00000470161 ALDH1B1P30837 517 aa24.63■■□□□ 1.53
PCGF3-208ENST00000470161 RTL5Q5HYW3 569 aaPredicted RBP24.63■■□□□ 1.53
PCGF3-208ENST00000470161 SLC10A5Q5PT55 438 aa24.63■■□□□ 1.53
PCGF3-208ENST00000470161 DNAAF4Q8WXU2 420 aa24.63■■□□□ 1.53
PCGF3-208ENST00000470161 HCLS1P14317 486 aaPredicted RBP24.62■■□□□ 1.53
PCGF3-208ENST00000470161 YY1P25490 414 aa24.62■■□□□ 1.53
PCGF3-208ENST00000470161 HSP90B1P14625 803 aaKnown RBP24.62■■□□□ 1.53
PCGF3-208ENST00000470161 SYNE4Q8N205 404 aa24.62■■□□□ 1.53
PCGF3-208ENST00000470161 BRCA1P38398 1863 aaKnown RBP24.61■■□□□ 1.53
PCGF3-208ENST00000470161 RRP1P56182 461 aaKnown RBP24.61■■□□□ 1.53
PCGF3-208ENST00000470161 ALDH1L2Q3SY69 923 aa24.61■■□□□ 1.53
PCGF3-208ENST00000470161 ZBTB38Q8NAP3 1195 aaPredicted RBP24.61■■□□□ 1.53
PCGF3-208ENST00000470161 SSH1Q8WYL5 1049 aa24.61■■□□□ 1.53
PCGF3-208ENST00000470161 ZNF219Q9P2Y4 722 aaPredicted RBP24.61■■□□□ 1.53
PCGF3-208ENST00000470161 RIC1Q4ADV7 1423 aa24.61■■□□□ 1.53
PCGF3-208ENST00000470161 CRY2Q49AN0 593 aa24.6■■□□□ 1.53
PCGF3-208ENST00000470161 PRPF40BQ6NWY9 871 aaKnown RBP24.6■■□□□ 1.53
PCGF3-208ENST00000470161 RBM17Q96I25 401 aaKnown RBP24.6■■□□□ 1.53
PCGF3-208ENST00000470161 SMC4Q9NTJ3 1288 aa24.6■■□□□ 1.53
PCGF3-208ENST00000470161 BCL2L13Q9BXK5 485 aa24.59■■□□□ 1.53
PCGF3-208ENST00000470161 DLEC1Q9Y238 1755 aa24.59■■□□□ 1.53
PCGF3-208ENST00000470161 C21orf2O43822 256 aa24.59■■□□□ 1.53
PCGF3-208ENST00000470161 IGKV5-2P06315 115 aa24.59■■□□□ 1.53
PCGF3-208ENST00000470161 CWF19L2Q2TBE0 894 aaKnown RBP24.59■■□□□ 1.53
PCGF3-208ENST00000470161 MRPL50Q8N5N7 158 aaKnown RBP24.59■■□□□ 1.53
PCGF3-208ENST00000470161 F6X3S4 739 aa24.58■■□□□ 1.53
PCGF3-208ENST00000470161 IRS4O14654 1257 aaPredicted RBP24.58■■□□□ 1.53
PCGF3-208ENST00000470161 COL11A2P13942 1736 aaPredicted RBP24.58■■□□□ 1.52
PCGF3-208ENST00000470161 NEURL1BA8MQ27 555 aa24.57■■□□□ 1.52
PCGF3-208ENST00000470161 PCCAP05165 728 aaPredicted RBP24.57■■□□□ 1.52
PCGF3-208ENST00000470161 ERICH6BQ5W0A0 696 aa24.57■■□□□ 1.52
PCGF3-208ENST00000470161 LINS1Q8NG48 757 aa24.57■■□□□ 1.52
PCGF3-208ENST00000470161 SOGA3Q5TF21 947 aa24.56■■□□□ 1.52
PCGF3-208ENST00000470161 SLC4A10Q6U841 1118 aa24.56■■□□□ 1.52
PCGF3-208ENST00000470161 HOXA10P31260 410 aaPredicted RBP24.56■■□□□ 1.52
PCGF3-208ENST00000470161 C3orf67Q6ZVT6 689 aa24.56■■□□□ 1.52
PCGF3-208ENST00000470161 ARFGEF1Q9Y6D6 1849 aa24.55■■□□□ 1.52
PCGF3-208ENST00000470161 PTPRCP08575 1304 aa24.55■■□□□ 1.52
PCGF3-208ENST00000470161 TNRC6CQ9HCJ0 1690 aaKnown RBP24.55■■□□□ 1.52
PCGF3-208ENST00000470161 DDX46Q7L014 1031 aaKnown RBP24.55■■□□□ 1.52
PCGF3-208ENST00000470161 JARID2Q92833 1246 aaPredicted RBP24.54■■□□□ 1.52
PCGF3-208ENST00000470161 CRAMP1Q96RY5 1269 aa24.54■■□□□ 1.52
PCGF3-208ENST00000470161 TMX4Q9H1E5 349 aaPredicted RBP24.54■■□□□ 1.52
PCGF3-208ENST00000470161 CHD4Q14839 1912 aa24.54■■□□□ 1.52
PCGF3-208ENST00000470161 GCKRQ14397 625 aa24.53■■□□□ 1.52
PCGF3-208ENST00000470161 RARSP54136 660 aaKnown RBP24.51■■□□□ 1.51
PCGF3-208ENST00000470161 BEND3Q5T5X7 828 aa24.51■■□□□ 1.51
PCGF3-208ENST00000470161 UBE3BQ7Z3V4 1068 aa24.51■■□□□ 1.51
PCGF3-208ENST00000470161 PDE8AO60658 829 aa24.5■■□□□ 1.51
PCGF3-208ENST00000470161 SF3B3Q15393 1217 aaKnown RBP24.5■■□□□ 1.51
PCGF3-208ENST00000470161 CCDC93Q567U6 631 aa24.5■■□□□ 1.51
PCGF3-208ENST00000470161 SRCIN1Q9C0H9 1055 aa24.5■■□□□ 1.51
PCGF3-208ENST00000470161 CDHR2Q9BYE9 1310 aa24.5■■□□□ 1.51
PCGF3-208ENST00000470161 SLX4Q8IY92 1834 aa24.49■■□□□ 1.51
PCGF3-208ENST00000470161 PPEF1O14829 653 aaPredicted RBP24.49■■□□□ 1.51
PCGF3-208ENST00000470161 PPP4R2Q9NY27 417 aa24.49■■□□□ 1.51
PCGF3-208ENST00000470161 C9orf78Q9NZ63 289 aaPredicted RBP24.49■■□□□ 1.51
PCGF3-208ENST00000470161 ABCC4O15439 1325 aa24.49■■□□□ 1.51
PCGF3-208ENST00000470161 CACNA1SQ13698 1873 aa24.48■■□□□ 1.51
PCGF3-208ENST00000470161 H7C1W4 665 aa24.48■■□□□ 1.51
PCGF3-208ENST00000470161 PLIN1O60240 522 aa24.48■■□□□ 1.51
PCGF3-208ENST00000470161 BBOX1O75936 387 aa24.48■■□□□ 1.51
PCGF3-208ENST00000470161 CCDC152Q4G0S7 254 aa24.48■■□□□ 1.51
PCGF3-208ENST00000470161 CC2D2BQ6DHV5 1058 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms