RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 TOMM70O94826 608 aa21.26■□□□□ 0.99
GTF3C2-209ENST00000470115 TCIRG1Q13488 830 aa21.26■□□□□ 0.99
GTF3C2-209ENST00000470115 CCDC93Q567U6 631 aa21.26■□□□□ 0.99
GTF3C2-209ENST00000470115 HSP90AB3PQ58FF7 597 aa21.26■□□□□ 0.99
GTF3C2-209ENST00000470115 GLTPD2A6NH11 291 aa21.25■□□□□ 0.99
GTF3C2-209ENST00000470115 RIC1Q4ADV7 1423 aa21.25■□□□□ 0.99
GTF3C2-209ENST00000470115 C3orf67Q6ZVT6 689 aa21.25■□□□□ 0.99
GTF3C2-209ENST00000470115 NLRP10Q86W26 655 aa21.25■□□□□ 0.99
GTF3C2-209ENST00000470115 C8orf58Q8NAV2 365 aa21.25■□□□□ 0.99
GTF3C2-209ENST00000470115 RPGRQ92834 1020 aaKnown RBP21.25■□□□□ 0.99
GTF3C2-209ENST00000470115 HYPKQ9NX55 129 aa21.25■□□□□ 0.99
GTF3C2-209ENST00000470115 CEP350Q5VT06 3117 aa21.24■□□□□ 0.99
GTF3C2-209ENST00000470115 HOXA10P31260 410 aaPredicted RBP21.24■□□□□ 0.99
GTF3C2-209ENST00000470115 ANKRD13DQ6ZTN6 518 aa21.24■□□□□ 0.99
GTF3C2-209ENST00000470115 PLBD2Q8NHP8 589 aa21.24■□□□□ 0.99
GTF3C2-209ENST00000470115 CCDC27Q2M243 656 aa21.23■□□□□ 0.99
GTF3C2-209ENST00000470115 SLC10A5Q5PT55 438 aa21.23■□□□□ 0.99
GTF3C2-209ENST00000470115 WWC1Q8IX03 1113 aa21.23■□□□□ 0.99
GTF3C2-209ENST00000470115 C16orf71Q8IYS4 520 aaPredicted RBP21.23■□□□□ 0.99
GTF3C2-209ENST00000470115 SYNE4Q8N205 404 aa21.23■□□□□ 0.99
GTF3C2-209ENST00000470115 NLRP3Q96P20 1036 aa21.23■□□□□ 0.99
GTF3C2-209ENST00000470115 TIAM2Q8IVF5 1701 aa21.22■□□□□ 0.99
GTF3C2-209ENST00000470115 HSPA6P17066 643 aa21.22■□□□□ 0.99
GTF3C2-209ENST00000470115 RTKN2Q8IZC4 609 aa21.22■□□□□ 0.99
GTF3C2-209ENST00000470115 ZNF428Q96B54 188 aa21.22■□□□□ 0.99
GTF3C2-209ENST00000470115 RBM17Q96I25 401 aaKnown RBP21.22■□□□□ 0.99
GTF3C2-209ENST00000470115 TRMT112Q9UI30 125 aaKnown RBP21.22■□□□□ 0.99
GTF3C2-209ENST00000470115 FKBP4Q02790 459 aaKnown RBP eCLIP21.21■□□□□ 0.99
GTF3C2-209ENST00000470115 DPY19L2Q6NUT2 758 aa21.21■□□□□ 0.99
GTF3C2-209ENST00000470115 TSR2Q969E8 191 aaKnown RBP21.21■□□□□ 0.99
GTF3C2-209ENST00000470115 CRAMP1Q96RY5 1269 aa21.21■□□□□ 0.99
GTF3C2-209ENST00000470115 ZNF277Q9NRM2 450 aaPredicted RBP21.21■□□□□ 0.99
GTF3C2-209ENST00000470115 ANKRD36CQ5JPF3 1778 aa21.2■□□□□ 0.99
GTF3C2-209ENST00000470115 DICER1Q9UPY3 1922 aaKnown RBP21.2■□□□□ 0.98
GTF3C2-209ENST00000470115 HCLS1P14317 486 aaPredicted RBP21.2■□□□□ 0.98
GTF3C2-209ENST00000470115 RBM46Q8TBY0 533 aaKnown RBP21.2■□□□□ 0.98
GTF3C2-209ENST00000470115 PHAXQ9H814 394 aaKnown RBP21.2■□□□□ 0.98
GTF3C2-209ENST00000470115 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
GTF3C2-209ENST00000470115 ATP5J2-PTCD1G3V325 749 aa21.19■□□□□ 0.98
GTF3C2-209ENST00000470115 TCERG1O14776 1098 aaKnown RBP21.19■□□□□ 0.98
GTF3C2-209ENST00000470115 VEGFAP15692 232 aaPredicted RBP21.19■□□□□ 0.98
GTF3C2-209ENST00000470115 TSPYL6Q8N831 410 aa21.19■□□□□ 0.98
GTF3C2-209ENST00000470115 SLC51AQ86UW1 340 aa21.18■□□□□ 0.98
GTF3C2-209ENST00000470115 ISCA1Q9BUE6 129 aa21.18■□□□□ 0.98
GTF3C2-209ENST00000470115 SALL2Q9Y467 1007 aaPredicted RBP21.18■□□□□ 0.98
GTF3C2-209ENST00000470115 NCBP3Q53F19 620 aaKnown RBP21.17■□□□□ 0.98
GTF3C2-209ENST00000470115 CC2D2BQ6DHV5 1058 aa21.17■□□□□ 0.98
GTF3C2-209ENST00000470115 RIC3Q7Z5B4 369 aa21.17■□□□□ 0.98
GTF3C2-209ENST00000470115 SH3TC1Q8TE82 1336 aa21.17■□□□□ 0.98
GTF3C2-209ENST00000470115 POTECB2RU33 542 aa21.16■□□□□ 0.98
GTF3C2-209ENST00000470115 PPEF1O14829 653 aaPredicted RBP21.16■□□□□ 0.98
GTF3C2-209ENST00000470115 GOLGA2Q08379 1002 aa21.16■□□□□ 0.98
GTF3C2-209ENST00000470115 CCDC30Q5VVM6 783 aa21.16■□□□□ 0.98
GTF3C2-209ENST00000470115 IL16Q14005 1332 aa21.15■□□□□ 0.98
GTF3C2-209ENST00000470115 DDNO94850 711 aaPredicted RBP21.15■□□□□ 0.98
GTF3C2-209ENST00000470115 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
GTF3C2-209ENST00000470115 FAM89AQ96GI7 184 aa21.15■□□□□ 0.98
GTF3C2-209ENST00000470115 PSMD1Q99460 953 aa21.15■□□□□ 0.98
GTF3C2-209ENST00000470115 CHMP4AQ9BY43 222 aa21.15■□□□□ 0.98
GTF3C2-209ENST00000470115 SNED1Q8TER0 1413 aa21.14■□□□□ 0.98
GTF3C2-209ENST00000470115 ABCC4O15439 1325 aa21.14■□□□□ 0.97
GTF3C2-209ENST00000470115 IARSP41252 1262 aaKnown RBP21.14■□□□□ 0.97
GTF3C2-209ENST00000470115 TRIM28Q13263 835 aaKnown RBP21.14■□□□□ 0.97
GTF3C2-209ENST00000470115 FSTL1Q12841 308 aa21.13■□□□□ 0.97
GTF3C2-209ENST00000470115 RTL5Q5HYW3 569 aaPredicted RBP21.13■□□□□ 0.97
GTF3C2-209ENST00000470115 GRIPAP1Q4V328 841 aa21.12■□□□□ 0.97
GTF3C2-209ENST00000470115 DDX46Q7L014 1031 aaKnown RBP21.12■□□□□ 0.97
GTF3C2-209ENST00000470115 ATP6V0A2Q9Y487 856 aa21.12■□□□□ 0.97
GTF3C2-209ENST00000470115 WDR90Q96KV7 1748 aa21.12■□□□□ 0.97
GTF3C2-209ENST00000470115 LAMB2P55268 1798 aa21.11■□□□□ 0.97
GTF3C2-209ENST00000470115 BBOX1O75936 387 aa21.11■□□□□ 0.97
GTF3C2-209ENST00000470115 APLP1P51693 650 aa21.11■□□□□ 0.97
GTF3C2-209ENST00000470115 TWISTNBQ3B726 338 aaPredicted RBP21.11■□□□□ 0.97
GTF3C2-209ENST00000470115 WDR63Q8IWG1 891 aa21.11■□□□□ 0.97
GTF3C2-209ENST00000470115 SMC1BQ8NDV3 1235 aa21.11■□□□□ 0.97
GTF3C2-209ENST00000470115 MYD88Q99836 296 aa21.11■□□□□ 0.97
GTF3C2-209ENST00000470115 TMX4Q9H1E5 349 aaPredicted RBP21.11■□□□□ 0.97
GTF3C2-209ENST00000470115 ZNF541Q9H0D2 1346 aa21.1■□□□□ 0.97
GTF3C2-209ENST00000470115 FZD9O00144 591 aa21.09■□□□□ 0.97
GTF3C2-209ENST00000470115 DDX58O95786 925 aaKnown RBP21.09■□□□□ 0.97
GTF3C2-209ENST00000470115 JDP2Q8WYK2 163 aa21.09■□□□□ 0.97
GTF3C2-209ENST00000470115 STK31Q9BXU1 1019 aa21.09■□□□□ 0.97
GTF3C2-209ENST00000470115 FANCIQ9NVI1 1328 aa21.08■□□□□ 0.97
GTF3C2-209ENST00000470115 IRS4O14654 1257 aaPredicted RBP21.08■□□□□ 0.97
GTF3C2-209ENST00000470115 GRAPQ13588 217 aa21.08■□□□□ 0.97
GTF3C2-209ENST00000470115 SP8Q8IXZ3 490 aa21.08■□□□□ 0.97
GTF3C2-209ENST00000470115 GRAPLQ8TC17 118 aaPredicted RBP21.08■□□□□ 0.97
GTF3C2-209ENST00000470115 METTL22Q9BUU2 404 aaPredicted RBP21.08■□□□□ 0.97
GTF3C2-209ENST00000470115 MAP3K2Q9Y2U5 619 aa21.08■□□□□ 0.97
GTF3C2-209ENST00000470115 SF3B3Q15393 1217 aaKnown RBP21.07■□□□□ 0.96
GTF3C2-209ENST00000470115 LARGE2Q8N3Y3 721 aa21.07■□□□□ 0.96
GTF3C2-209ENST00000470115 CCDC191Q8NCU4 936 aa21.07■□□□□ 0.96
GTF3C2-209ENST00000470115 L3MBTL3Q96JM7 780 aaPredicted RBP21.07■□□□□ 0.96
GTF3C2-209ENST00000470115 DDX60Q8IY21 1712 aaKnown RBP21.07■□□□□ 0.96
GTF3C2-209ENST00000470115 PI4KAP2A4QPH2 592 aa21.06■□□□□ 0.96
GTF3C2-209ENST00000470115 SLC4A2P04920 1241 aa21.06■□□□□ 0.96
GTF3C2-209ENST00000470115 KSR2Q6VAB6 950 aa21.06■□□□□ 0.96
GTF3C2-209ENST00000470115 G2E3Q7L622 706 aa21.06■□□□□ 0.96
GTF3C2-209ENST00000470115 PI4KAP1Q8N8J0 262 aa21.06■□□□□ 0.96
GTF3C2-209ENST00000470115 ZBTB38Q8NAP3 1195 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms