RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 DUOX1Q9NRD9 1551 aa11.38□□□□□ -0.59
LSM2-210ENST00000470086 CAMTA2O94983 1202 aa11.38□□□□□ -0.59
LSM2-210ENST00000470086 PDE6BP35913 854 aa11.38□□□□□ -0.59
LSM2-210ENST00000470086 PIP4K2AP48426 406 aaPredicted RBP11.38□□□□□ -0.59
LSM2-210ENST00000470086 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
LSM2-210ENST00000470086 CIAPIN1Q6FI81 312 aa11.38□□□□□ -0.59
LSM2-210ENST00000470086 STYK1Q6J9G0 422 aa11.38□□□□□ -0.59
LSM2-210ENST00000470086 COL4A1P02462 1669 aa11.38□□□□□ -0.59
LSM2-210ENST00000470086 LRRC37AA6NMS7 1700 aa11.38□□□□□ -0.59
LSM2-210ENST00000470086 CCDC93Q567U6 631 aa11.37□□□□□ -0.59
LSM2-210ENST00000470086 C1orf141Q5JVX7 400 aa11.37□□□□□ -0.59
LSM2-210ENST00000470086 CNBD1Q8NA66 436 aa11.37□□□□□ -0.59
LSM2-210ENST00000470086 ANKRD36CQ5JPF3 1778 aa11.36□□□□□ -0.59
LSM2-210ENST00000470086 RNMTO43148 476 aaKnown RBP11.36□□□□□ -0.59
LSM2-210ENST00000470086 IARSP41252 1262 aaKnown RBP11.36□□□□□ -0.59
LSM2-210ENST00000470086 SAPCD2Q86UD0 394 aa11.36□□□□□ -0.59
LSM2-210ENST00000470086 MASTLQ96GX5 879 aa11.36□□□□□ -0.59
LSM2-210ENST00000470086 TSPYL2Q9H2G4 693 aaPredicted RBP11.36□□□□□ -0.59
LSM2-210ENST00000470086 ZNF646O15015 1829 aaPredicted RBP11.36□□□□□ -0.59
LSM2-210ENST00000470086 AMOTQ4VCS5 1084 aa11.35□□□□□ -0.59
LSM2-210ENST00000470086 SULT6B1Q6IMI4 303 aa11.35□□□□□ -0.59
LSM2-210ENST00000470086 CNKSR1Q969H4 720 aa11.35□□□□□ -0.59
LSM2-210ENST00000470086 GLIS2Q9BZE0 524 aaPredicted RBP11.35□□□□□ -0.59
LSM2-210ENST00000470086 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
LSM2-210ENST00000470086 SCN9AQ15858 1988 aa11.35□□□□□ -0.59
LSM2-210ENST00000470086 HEG1Q9ULI3 1381 aa11.34□□□□□ -0.59
LSM2-210ENST00000470086 COL6A3P12111 3177 aa11.34□□□□□ -0.59
LSM2-210ENST00000470086 ECE1P42892 770 aa11.34□□□□□ -0.59
LSM2-210ENST00000470086 BRPF1P55201 1214 aaPredicted RBP11.34□□□□□ -0.59
LSM2-210ENST00000470086 PNMA8AQ86V59 439 aaPredicted RBP11.34□□□□□ -0.59
LSM2-210ENST00000470086 GPC2Q8N158 579 aa11.34□□□□□ -0.59
LSM2-210ENST00000470086 PHF12Q96QT6 1004 aa11.34□□□□□ -0.59
LSM2-210ENST00000470086 GJA3Q9Y6H8 435 aa11.34□□□□□ -0.59
LSM2-210ENST00000470086 DDX60Q8IY21 1712 aaKnown RBP11.34□□□□□ -0.59
LSM2-210ENST00000470086 LAMB1P07942 1786 aa11.33□□□□□ -0.59
LSM2-210ENST00000470086 DLG5Q8TDM6 1919 aa11.33□□□□□ -0.6
LSM2-210ENST00000470086 COL3A1P02461 1466 aaPredicted RBP11.33□□□□□ -0.6
LSM2-210ENST00000470086 PSME4Q14997 1843 aa11.33□□□□□ -0.6
LSM2-210ENST00000470086 SHTN1A0MZ66 631 aa11.33□□□□□ -0.6
LSM2-210ENST00000470086 PRAMEF22A3QJZ6 481 aa11.33□□□□□ -0.6
LSM2-210ENST00000470086 AKAP4Q5JQC9 854 aa11.33□□□□□ -0.6
LSM2-210ENST00000470086 SYNE4Q8N205 404 aa11.33□□□□□ -0.6
LSM2-210ENST00000470086 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
LSM2-210ENST00000470086 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
LSM2-210ENST00000470086 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.6
LSM2-210ENST00000470086 CELF2O95319 508 aaKnown RBP11.32□□□□□ -0.6
LSM2-210ENST00000470086 A1BGP04217 495 aa11.32□□□□□ -0.6
LSM2-210ENST00000470086 MAP2K2P36507 400 aa11.32□□□□□ -0.6
LSM2-210ENST00000470086 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
LSM2-210ENST00000470086 KLRG2A4D1S0 409 aaPredicted RBP11.31□□□□□ -0.6
LSM2-210ENST00000470086 FAM155AB1AL88 458 aaPredicted RBP11.31□□□□□ -0.6
LSM2-210ENST00000470086 IL13P35225 146 aa11.31□□□□□ -0.6
LSM2-210ENST00000470086 ST5P78524 1137 aa11.31□□□□□ -0.6
LSM2-210ENST00000470086 SOGA3Q5TF21 947 aa11.31□□□□□ -0.6
LSM2-210ENST00000470086 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
LSM2-210ENST00000470086 KCNQ3O43525 872 aa11.3□□□□□ -0.6
LSM2-210ENST00000470086 HIRAP54198 1017 aaPredicted RBP11.3□□□□□ -0.6
LSM2-210ENST00000470086 MTHFSDQ2M296 383 aaKnown RBP11.3□□□□□ -0.6
LSM2-210ENST00000470086 TRPM4Q8TD43 1214 aa11.3□□□□□ -0.6
LSM2-210ENST00000470086 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
LSM2-210ENST00000470086 ZNF408Q9H9D4 720 aa11.3□□□□□ -0.6
LSM2-210ENST00000470086 PDZRN3Q9UPQ7 1066 aa11.3□□□□□ -0.6
LSM2-210ENST00000470086 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
LSM2-210ENST00000470086 HMOX1P09601 288 aa11.29□□□□□ -0.6
LSM2-210ENST00000470086 NPR1P16066 1061 aa11.29□□□□□ -0.6
LSM2-210ENST00000470086 IL6STP40189 918 aaPredicted RBP11.28□□□□□ -0.6
LSM2-210ENST00000470086 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
LSM2-210ENST00000470086 SETDB2Q96T68 719 aa11.28□□□□□ -0.6
LSM2-210ENST00000470086 PSMD1Q99460 953 aa11.28□□□□□ -0.6
LSM2-210ENST00000470086 RANBP2P49792 3224 aaKnown RBP11.28□□□□□ -0.6
LSM2-210ENST00000470086 ZSWIM8A7E2V4 1837 aa11.28□□□□□ -0.6
LSM2-210ENST00000470086 CA12O43570 354 aa11.27□□□□□ -0.61
LSM2-210ENST00000470086 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.61
LSM2-210ENST00000470086 USP50Q70EL3 339 aaPredicted RBP11.27□□□□□ -0.61
LSM2-210ENST00000470086 NBPF5PQ86XG9 351 aaPredicted RBP11.27□□□□□ -0.61
LSM2-210ENST00000470086 KIF12Q96FN5 646 aa11.27□□□□□ -0.61
LSM2-210ENST00000470086 GPRC5DQ9NZD1 345 aa11.27□□□□□ -0.61
LSM2-210ENST00000470086 HPS5Q9UPZ3 1129 aa11.27□□□□□ -0.61
LSM2-210ENST00000470086 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
LSM2-210ENST00000470086 A0A087WZG4 1122 aa11.26□□□□□ -0.61
LSM2-210ENST00000470086 NPHP1O15259 732 aa11.26□□□□□ -0.61
LSM2-210ENST00000470086 EGFRP00533 1210 aa11.26□□□□□ -0.61
LSM2-210ENST00000470086 LMOD1P29536 600 aaPredicted RBP11.26□□□□□ -0.61
LSM2-210ENST00000470086 HABP4Q5JVS0 413 aaKnown RBP11.26□□□□□ -0.61
LSM2-210ENST00000470086 HHIPL1Q96JK4 782 aa11.26□□□□□ -0.61
LSM2-210ENST00000470086 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
LSM2-210ENST00000470086 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
LSM2-210ENST00000470086 EIF6P56537 245 aaKnown RBP11.25□□□□□ -0.61
LSM2-210ENST00000470086 HLFQ16534 295 aa11.25□□□□□ -0.61
LSM2-210ENST00000470086 AOC3Q16853 763 aa11.25□□□□□ -0.61
LSM2-210ENST00000470086 ZNF790Q6PG37 636 aa11.25□□□□□ -0.61
LSM2-210ENST00000470086 NUTM1Q86Y26 1132 aa11.25□□□□□ -0.61
LSM2-210ENST00000470086 RTKN2Q8IZC4 609 aa11.25□□□□□ -0.61
LSM2-210ENST00000470086 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
LSM2-210ENST00000470086 STARD3NLO95772 234 aa11.24□□□□□ -0.61
LSM2-210ENST00000470086 GMPSP49915 693 aaPredicted RBP11.24□□□□□ -0.61
LSM2-210ENST00000470086 CRY2Q49AN0 593 aa11.24□□□□□ -0.61
LSM2-210ENST00000470086 NBPF10Q6P3W6 841 aaKnown RBP11.24□□□□□ -0.61
LSM2-210ENST00000470086 NBPF15Q8N660 670 aa11.24□□□□□ -0.61
LSM2-210ENST00000470086 IL17REQ8NFR9 667 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms