RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 CCDC57Q2TAC2 916 aa8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 IL15P40933 162 aaPredicted RBP8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 USP42Q9H9J4 1324 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 CWC15Q9P013 229 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 CAVIN1Q6NZI2 390 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 ARGLU1Q9NWB6 273 aaPredicted RBP8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 ADAMTS2O95450 1211 aa8.35□□□□□ -1.07
GAPVD1-215ENST00000470056 PSMA5P28066 241 aa8.35□□□□□ -1.07
GAPVD1-215ENST00000470056 ZBTB3Q9H5J0 574 aa8.35□□□□□ -1.07
GAPVD1-215ENST00000470056 CCDC39Q9UFE4 941 aa8.35□□□□□ -1.07
GAPVD1-215ENST00000470056 ATG3Q9NT62 314 aa8.35□□□□□ -1.07
GAPVD1-215ENST00000470056 IGKV5-2P06315 115 aa8.35□□□□□ -1.07
GAPVD1-215ENST00000470056 SPRYD3Q8NCJ5 442 aa8.35□□□□□ -1.07
GAPVD1-215ENST00000470056 ADAMTS7Q9UKP4 1686 aa8.35□□□□□ -1.07
GAPVD1-215ENST00000470056 SIL1Q9H173 461 aa8.35□□□□□ -1.07
GAPVD1-215ENST00000470056 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 NUTM2AQ8IVF1 878 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 TSPYL1Q9H0U9 437 aa8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 GPR108Q9NPR9 543 aa8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 CEP126Q9P2H0 1117 aa8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 AHDC1Q5TGY3 1603 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 ATP5J2-PTCD1G3V325 749 aa8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 MBD3O95983 291 aa8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 PIP4K2BP78356 416 aa8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 STRCQ7RTU9 1775 aa8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 DDX49Q9Y6V7 483 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 PDIA4P13667 645 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 ACBD3Q9H3P7 528 aa8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 ZNF652Q9Y2D9 606 aa8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 PKD1L3Q7Z443 1732 aa8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 VIRMAQ69YN4 1812 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 COL14A1Q05707 1796 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-215ENST00000470056 UBAP1LF5GYI3 381 aa8.34□□□□□ -1.08
GAPVD1-215ENST00000470056 TCIRG1Q13488 830 aa8.34□□□□□ -1.08
GAPVD1-215ENST00000470056 SALL3Q9BXA9 1300 aa8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 COL18A1P39060 1754 aa8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 CCDC158Q5M9N0 1113 aa8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 LMBR1LQ6UX01 489 aa8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 GZF1Q9H116 711 aaPredicted RBP8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 NHSL1Q5SYE7 1610 aa8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 NEK4P51957 841 aa8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 H7C1W4 665 aa8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 RABL6Q3YEC7 729 aaPredicted RBP8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 CCDC70Q6NSX1 233 aa8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 CCDC173Q0VFZ6 552 aa8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 IFIT5Q13325 482 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 PA2G4Q9UQ80 394 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 TRIM28Q13263 835 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 PIGBQ92521 554 aa8.33□□□□□ -1.08
GAPVD1-215ENST00000470056 PCCAP05165 728 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 KRT32Q14532 448 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 NEUROD6Q96NK8 337 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 RFX7Q2KHR2 1363 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 TNS2Q63HR2 1409 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 CIAO1O76071 339 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 DNAJC10Q8IXB1 793 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 LETM1O95202 739 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 IL6STP40189 918 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 MEX3CQ5U5Q3 659 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 SGSM2O43147 1006 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 A1BGP04217 495 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 BARGINQ6ZT62 677 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 NGLY1Q96IV0 654 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 MAP3K15Q6ZN16 1313 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 ERVV-1B6SEH8 477 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 AK7Q96M32 723 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 HMG20BQ9P0W2 317 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 PARP10Q53GL7 1025 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 TSHZ3Q63HK5 1081 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 PDCL2Q8N4E4 241 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 ZSCAN31Q96LW9 406 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 EYA2O00167 538 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 ANKRD1Q15327 319 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 TNNI3KQ59H18 835 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 CWC27Q6UX04 472 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 FPGT-TNNI3KV9GXZ4 949 aa8.32□□□□□ -1.08
GAPVD1-215ENST00000470056 ANKRD18BA2A2Z9 1011 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 PI4K2BQ8TCG2 481 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 CCDC8Q9H0W5 538 aaPredicted RBP8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 SPATA31A1Q5TZJ5 1347 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 ZSCAN25Q6NSZ9 544 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 GIGYF2Q6Y7W6 1299 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 NBPF26B4DH59 902 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 CCP110O43303 1012 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 ATP5JP18859 108 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 NBPF14Q5TI25 921 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 NBPF10Q6P3W6 841 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 NBPF15Q8N660 670 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 TRMT112Q9UI30 125 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 CDHR2Q9BYE9 1310 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 JCADQ9P266 1359 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 PRKCSHP14314 528 aaPredicted RBP8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 PIP4K2AP48426 406 aaPredicted RBP8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 CCDC87Q9NVE4 849 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 CYP46A1Q9Y6A2 500 aa8.31□□□□□ -1.08
GAPVD1-215ENST00000470056 ZNF771Q7L3S4 317 aaPredicted RBP8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 FRAT2O75474 233 aaPredicted RBP8.3□□□□□ -1.08
GAPVD1-215ENST00000470056 DZIP3Q86Y13 1208 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms