RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 BRIP1Q9BX63 1249 aa32.51■■■□□ 2.79
KPNA4-202ENST00000469804 PPP1R42Q7Z4L9 355 aa32.5■■■□□ 2.79
KPNA4-202ENST00000469804 C2CD5Q86YS7 1000 aa32.5■■■□□ 2.79
KPNA4-202ENST00000469804 SSH1Q8WYL5 1049 aa32.5■■■□□ 2.79
KPNA4-202ENST00000469804 METTL22Q9BUU2 404 aaPredicted RBP32.5■■■□□ 2.79
KPNA4-202ENST00000469804 DDX60Q8IY21 1712 aaKnown RBP32.5■■■□□ 2.79
KPNA4-202ENST00000469804 GPR162Q16538 588 aa32.49■■■□□ 2.79
KPNA4-202ENST00000469804 MRPL50Q8N5N7 158 aaKnown RBP32.49■■■□□ 2.79
KPNA4-202ENST00000469804 UTP14AQ9BVJ6 771 aaKnown RBP32.49■■■□□ 2.79
KPNA4-202ENST00000469804 ARFGEF1Q9Y6D6 1849 aa32.49■■■□□ 2.79
KPNA4-202ENST00000469804 PDE6BP35913 854 aa32.47■■■□□ 2.79
KPNA4-202ENST00000469804 SYNE4Q8N205 404 aa32.46■■■□□ 2.79
KPNA4-202ENST00000469804 H0YIN7 160 aa32.45■■■□□ 2.79
KPNA4-202ENST00000469804 TRMT112Q9UI30 125 aaKnown RBP32.45■■■□□ 2.79
KPNA4-202ENST00000469804 F6X3S4 739 aa32.44■■■□□ 2.78
KPNA4-202ENST00000469804 CT47B1P0C2W7 299 aaPredicted RBP32.44■■■□□ 2.78
KPNA4-202ENST00000469804 BCS1LQ9Y276 419 aa32.44■■■□□ 2.78
KPNA4-202ENST00000469804 RIC1Q4ADV7 1423 aa32.43■■■□□ 2.78
KPNA4-202ENST00000469804 DCAF8L1A6NGE4 600 aa32.43■■■□□ 2.78
KPNA4-202ENST00000469804 IGKV5-2P06315 115 aa32.43■■■□□ 2.78
KPNA4-202ENST00000469804 SMC4Q9NTJ3 1288 aa32.43■■■□□ 2.78
KPNA4-202ENST00000469804 PIM2Q9P1W9 311 aa32.43■■■□□ 2.78
KPNA4-202ENST00000469804 TRIM28Q13263 835 aaKnown RBP32.42■■■□□ 2.78
KPNA4-202ENST00000469804 ALDH1L2Q3SY69 923 aa32.42■■■□□ 2.78
KPNA4-202ENST00000469804 RTL5Q5HYW3 569 aaPredicted RBP32.42■■■□□ 2.78
KPNA4-202ENST00000469804 DNAAF4Q8WXU2 420 aa32.42■■■□□ 2.78
KPNA4-202ENST00000469804 CWF19L2Q2TBE0 894 aaKnown RBP32.41■■■□□ 2.78
KPNA4-202ENST00000469804 C3orf67Q6ZVT6 689 aa32.41■■■□□ 2.78
KPNA4-202ENST00000469804 ZNF622Q969S3 477 aaKnown RBP eCLIP32.41■■■□□ 2.782e-8■■□□□ 12.8
KPNA4-202ENST00000469804 FAM89AQ96GI7 184 aa32.41■■■□□ 2.78
KPNA4-202ENST00000469804 SH3TC1Q8TE82 1336 aa32.41■■■□□ 2.78
KPNA4-202ENST00000469804 SLX4Q8IY92 1834 aa32.4■■■□□ 2.78
KPNA4-202ENST00000469804 RNF123Q5XPI4 1314 aa32.4■■■□□ 2.78
KPNA4-202ENST00000469804 GOLGB1Q14789 3259 aaKnown RBP32.39■■■□□ 2.78
KPNA4-202ENST00000469804 SRGNP10124 158 aa32.39■■■□□ 2.78
KPNA4-202ENST00000469804 HCLS1P14317 486 aaPredicted RBP32.39■■■□□ 2.78
KPNA4-202ENST00000469804 NEXNQ0ZGT2 675 aa32.39■■■□□ 2.78
KPNA4-202ENST00000469804 CWC25Q9NXE8 425 aaPredicted RBP32.39■■■□□ 2.78
KPNA4-202ENST00000469804 KLRG2A4D1S0 409 aaPredicted RBP32.38■■■□□ 2.77
KPNA4-202ENST00000469804 DALRD3Q5D0E6 543 aaKnown RBP32.38■■■□□ 2.77
KPNA4-202ENST00000469804 CCDC191Q8NCU4 936 aa32.38■■■□□ 2.77
KPNA4-202ENST00000469804 JARID2Q92833 1246 aaPredicted RBP32.38■■■□□ 2.77
KPNA4-202ENST00000469804 PDZRN3Q9UPQ7 1066 aa32.38■■■□□ 2.77
KPNA4-202ENST00000469804 NEURL1BA8MQ27 555 aa32.37■■■□□ 2.77
KPNA4-202ENST00000469804 RARSP54136 660 aaKnown RBP32.37■■■□□ 2.77
KPNA4-202ENST00000469804 SLC10A5Q5PT55 438 aa32.36■■■□□ 2.77
KPNA4-202ENST00000469804 YTHDC1Q96MU7 727 aaKnown RBP32.36■■■□□ 2.77
KPNA4-202ENST00000469804 CHD4Q14839 1912 aa32.36■■■□□ 2.77
KPNA4-202ENST00000469804 TAF1P21675 1872 aa32.35■■■□□ 2.77
KPNA4-202ENST00000469804 MASTLQ96GX5 879 aa32.35■■■□□ 2.77
KPNA4-202ENST00000469804 CRY2Q49AN0 593 aa32.34■■■□□ 2.77
KPNA4-202ENST00000469804 STYK1Q6J9G0 422 aa32.34■■■□□ 2.77
KPNA4-202ENST00000469804 TTLL6Q8N841 843 aa32.34■■■□□ 2.77
KPNA4-202ENST00000469804 MYH3P11055 1940 aa32.34■■■□□ 2.77
KPNA4-202ENST00000469804 NPR1P16066 1061 aa32.33■■■□□ 2.77
KPNA4-202ENST00000469804 ZBTB38Q8NAP3 1195 aaPredicted RBP32.33■■■□□ 2.77
KPNA4-202ENST00000469804 PTPRCP08575 1304 aa32.32■■■□□ 2.76
KPNA4-202ENST00000469804 BEND3Q5T5X7 828 aa32.32■■■□□ 2.76
KPNA4-202ENST00000469804 SLC4A10Q6U841 1118 aa32.32■■■□□ 2.76
KPNA4-202ENST00000469804 LINS1Q8NG48 757 aa32.32■■■□□ 2.76
KPNA4-202ENST00000469804 NLRP3Q96P20 1036 aa32.32■■■□□ 2.76
KPNA4-202ENST00000469804 IRS4O14654 1257 aaPredicted RBP32.31■■■□□ 2.76
KPNA4-202ENST00000469804 PCCAP05165 728 aaPredicted RBP32.31■■■□□ 2.76
KPNA4-202ENST00000469804 GRIN3BO60391 1043 aa32.3■■■□□ 2.76
KPNA4-202ENST00000469804 RPGRQ92834 1020 aaKnown RBP32.3■■■□□ 2.76
KPNA4-202ENST00000469804 ZNF219Q9P2Y4 722 aaPredicted RBP32.3■■■□□ 2.76
KPNA4-202ENST00000469804 NOB1Q9ULX3 412 aaKnown RBP32.3■■■□□ 2.76
KPNA4-202ENST00000469804 BCAR3O75815 825 aa32.29■■■□□ 2.76
KPNA4-202ENST00000469804 GCKRQ14397 625 aa32.29■■■□□ 2.76
KPNA4-202ENST00000469804 PRPF40BQ6NWY9 871 aaKnown RBP32.29■■■□□ 2.76
KPNA4-202ENST00000469804 CNKSR1Q969H4 720 aa32.29■■■□□ 2.76
KPNA4-202ENST00000469804 UTRNP46939 3433 aa32.27■■■□□ 2.76
KPNA4-202ENST00000469804 BRPF1P55201 1214 aaPredicted RBP32.27■■■□□ 2.76
KPNA4-202ENST00000469804 COL4A1P02462 1669 aa32.27■■■□□ 2.76
KPNA4-202ENST00000469804 UBE3BQ7Z3V4 1068 aa32.26■■■□□ 2.75
KPNA4-202ENST00000469804 FER1L6Q2WGJ9 1857 aa32.25■■■□□ 2.75
KPNA4-202ENST00000469804 CDHR2Q9BYE9 1310 aa32.25■■■□□ 2.75
KPNA4-202ENST00000469804 C21orf2O43822 256 aa32.24■■■□□ 2.75
KPNA4-202ENST00000469804 HOXA10P31260 410 aaPredicted RBP32.24■■■□□ 2.75
KPNA4-202ENST00000469804 ARHGAP27Q6ZUM4 889 aa32.24■■■□□ 2.75
KPNA4-202ENST00000469804 SRCIN1Q9C0H9 1055 aa32.24■■■□□ 2.75
KPNA4-202ENST00000469804 KIF16BQ96L93 1317 aa32.24■■■□□ 2.75
KPNA4-202ENST00000469804 CCDC88AQ3V6T2 1871 aa32.23■■■□□ 2.75
KPNA4-202ENST00000469804 H7C1W4 665 aa32.23■■■□□ 2.75
KPNA4-202ENST00000469804 SLC51AQ86UW1 340 aa32.23■■■□□ 2.75
KPNA4-202ENST00000469804 RBM17Q96I25 401 aaKnown RBP32.23■■■□□ 2.75
KPNA4-202ENST00000469804 SBF1O95248 1867 aa32.23■■■□□ 2.75
KPNA4-202ENST00000469804 ABCC4O15439 1325 aa32.22■■■□□ 2.75
KPNA4-202ENST00000469804 ALDH1B1P30837 517 aa32.21■■■□□ 2.75
KPNA4-202ENST00000469804 CASP7P55210 303 aa32.21■■■□□ 2.75
KPNA4-202ENST00000469804 OLFM4Q6UX06 510 aa32.21■■■□□ 2.75
KPNA4-202ENST00000469804 SPEF2Q9C093 1822 aa32.21■■■□□ 2.75
KPNA4-202ENST00000469804 PDE8AO60658 829 aa32.2■■■□□ 2.75
KPNA4-202ENST00000469804 ALDH1L1O75891 902 aa32.2■■■□□ 2.75
KPNA4-202ENST00000469804 SF3B3Q15393 1217 aaKnown RBP32.2■■■□□ 2.75
KPNA4-202ENST00000469804 CRAMP1Q96RY5 1269 aa32.2■■■□□ 2.75
KPNA4-202ENST00000469804 TNNQ9UQP3 1299 aa32.2■■■□□ 2.75
KPNA4-202ENST00000469804 FRAT1Q92837 279 aaPredicted RBP32.19■■■□□ 2.74
KPNA4-202ENST00000469804 CCDC85AQ96PX6 553 aaPredicted RBP32.19■■■□□ 2.74
KPNA4-202ENST00000469804 RASSF7Q02833 373 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms