RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 CFAP53Q96M91 514 aa24.38■■□□□ 1.49
TTC28-205ENST00000469670 BEGAINQ9BUH8 593 aa24.38■■□□□ 1.49
TTC28-205ENST00000469670 NYXQ9GZU5 481 aa24.38■■□□□ 1.49
TTC28-205ENST00000469670 COL4A5P29400 1685 aa24.37■■□□□ 1.49
TTC28-205ENST00000469670 EPS15P42566 896 aa24.37■■□□□ 1.49
TTC28-205ENST00000469670 DCTN1Q14203 1278 aa24.37■■□□□ 1.49
TTC28-205ENST00000469670 GRM1Q13255 1194 aa24.36■■□□□ 1.49
TTC28-205ENST00000469670 CYP4F22Q6NT55 531 aa24.36■■□□□ 1.49
TTC28-205ENST00000469670 LARGE2Q8N3Y3 721 aa24.36■■□□□ 1.49
TTC28-205ENST00000469670 GPR101Q96P66 508 aaPredicted RBP24.36■■□□□ 1.49
TTC28-205ENST00000469670 NUDCQ9Y266 331 aa24.36■■□□□ 1.49
TTC28-205ENST00000469670 LTBP1Q14766 1721 aa24.35■■□□□ 1.49
TTC28-205ENST00000469670 USP50Q70EL3 339 aaPredicted RBP24.35■■□□□ 1.49
TTC28-205ENST00000469670 RPGRQ92834 1020 aaKnown RBP24.35■■□□□ 1.49
TTC28-205ENST00000469670 CCDC85CA6NKD9 419 aa24.34■■□□□ 1.49
TTC28-205ENST00000469670 U2AF1L5P0DN76 240 aaPredicted RBP24.34■■□□□ 1.49
TTC28-205ENST00000469670 HOXA10P31260 410 aaPredicted RBP24.34■■□□□ 1.49
TTC28-205ENST00000469670 U2AF1Q01081 240 aaKnown RBP eCLIP24.34■■□□□ 1.49
TTC28-205ENST00000469670 GRIPAP1Q4V328 841 aa24.34■■□□□ 1.49
TTC28-205ENST00000469670 CST9Q5W186 159 aa24.34■■□□□ 1.49
TTC28-205ENST00000469670 NGEFQ8N5V2 710 aa24.34■■□□□ 1.49
TTC28-205ENST00000469670 CCER1Q8TC90 406 aaPredicted RBP24.34■■□□□ 1.49
TTC28-205ENST00000469670 THSD7BQ9C0I4 1608 aa24.34■■□□□ 1.49
TTC28-205ENST00000469670 ERVV-1B6SEH8 477 aa24.33■■□□□ 1.49
TTC28-205ENST00000469670 TRAF5O00463 557 aa24.33■■□□□ 1.49
TTC28-205ENST00000469670 HTATSF1O43719 755 aaKnown RBP24.33■■□□□ 1.49
TTC28-205ENST00000469670 TAF7Q15545 349 aaPredicted RBP24.32■■□□□ 1.48
TTC28-205ENST00000469670 TLL2Q9Y6L7 1015 aa24.32■■□□□ 1.48
TTC28-205ENST00000469670 MLLT1Q03111 559 aaPredicted RBP24.31■■□□□ 1.48
TTC28-205ENST00000469670 NIM1KQ8IY84 436 aa24.31■■□□□ 1.48
TTC28-205ENST00000469670 MIS18AQ9NYP9 233 aa24.31■■□□□ 1.48
TTC28-205ENST00000469670 MAP3K15Q6ZN16 1313 aa24.31■■□□□ 1.48
TTC28-205ENST00000469670 TCERG1O14776 1098 aaKnown RBP24.3■■□□□ 1.48
TTC28-205ENST00000469670 PPEF1O14829 653 aaPredicted RBP24.3■■□□□ 1.48
TTC28-205ENST00000469670 SLC51AQ86UW1 340 aa24.3■■□□□ 1.48
TTC28-205ENST00000469670 RBM17Q96I25 401 aaKnown RBP24.3■■□□□ 1.48
TTC28-205ENST00000469670 CRAMP1Q96RY5 1269 aa24.3■■□□□ 1.48
TTC28-205ENST00000469670 RIC1Q4ADV7 1423 aa24.29■■□□□ 1.48
TTC28-205ENST00000469670 AOC2O75106 756 aa24.29■■□□□ 1.48
TTC28-205ENST00000469670 GPTP24298 496 aa24.29■■□□□ 1.48
TTC28-205ENST00000469670 MAP2K2P36507 400 aa24.29■■□□□ 1.48
TTC28-205ENST00000469670 RGS19P49795 217 aa24.29■■□□□ 1.48
TTC28-205ENST00000469670 KIF6Q6ZMV9 814 aa24.29■■□□□ 1.48
TTC28-205ENST00000469670 TSKSQ9UJT2 592 aa24.29■■□□□ 1.48
TTC28-205ENST00000469670 UBN2Q6ZU65 1347 aa24.29■■□□□ 1.48
TTC28-205ENST00000469670 IBTKQ9P2D0 1353 aaPredicted RBP24.29■■□□□ 1.48
TTC28-205ENST00000469670 SUSD4Q5VX71 490 aa24.28■■□□□ 1.48
TTC28-205ENST00000469670 TTLL7Q6ZT98 887 aa24.28■■□□□ 1.48
TTC28-205ENST00000469670 ADARB2Q9NS39 739 aaKnown RBP24.28■■□□□ 1.48
TTC28-205ENST00000469670 RRP7AQ9Y3A4 280 aaKnown RBP24.28■■□□□ 1.48
TTC28-205ENST00000469670 PPIP5K2O43314 1243 aa24.27■■□□□ 1.48
TTC28-205ENST00000469670 GPRC5DQ9NZD1 345 aa24.27■■□□□ 1.48
TTC28-205ENST00000469670 ZBTB3Q9H5J0 574 aa24.26■■□□□ 1.47
TTC28-205ENST00000469670 AOC3Q16853 763 aa24.25■■□□□ 1.47
TTC28-205ENST00000469670 SAPCD2Q86UD0 394 aa24.25■■□□□ 1.47
TTC28-205ENST00000469670 LAMB4A4D0S4 1761 aa24.24■■□□□ 1.47
TTC28-205ENST00000469670 CELF2O95319 508 aaKnown RBP24.24■■□□□ 1.47
TTC28-205ENST00000469670 NTSR2O95665 410 aa24.24■■□□□ 1.47
TTC28-205ENST00000469670 MYL6BP14649 208 aa24.24■■□□□ 1.47
TTC28-205ENST00000469670 C3orf67Q6ZVT6 689 aa24.24■■□□□ 1.47
TTC28-205ENST00000469670 ZNF34Q8IZ26 560 aa24.24■■□□□ 1.47
TTC28-205ENST00000469670 PNISRQ8TF01 805 aaKnown RBP24.24■■□□□ 1.47
TTC28-205ENST00000469670 TMX4Q9H1E5 349 aaPredicted RBP24.24■■□□□ 1.47
TTC28-205ENST00000469670 VPS33BQ9H267 617 aa24.24■■□□□ 1.47
TTC28-205ENST00000469670 CA12O43570 354 aa24.23■■□□□ 1.47
TTC28-205ENST00000469670 PPP2R1AP30153 589 aa24.22■■□□□ 1.47
TTC28-205ENST00000469670 CXCL9Q07325 125 aa24.22■■□□□ 1.47
TTC28-205ENST00000469670 MCOLN1Q9GZU1 580 aa24.22■■□□□ 1.47
TTC28-205ENST00000469670 ZNRF3Q9ULT6 936 aa24.22■■□□□ 1.47
TTC28-205ENST00000469670 ATP6V0A2Q9Y487 856 aa24.22■■□□□ 1.47
TTC28-205ENST00000469670 TRPM7Q96QT4 1865 aa24.21■■□□□ 1.47
TTC28-205ENST00000469670 EIF4A1P60842 406 aaKnown RBP24.21■■□□□ 1.47
TTC28-205ENST00000469670 PPP1R42Q7Z4L9 355 aa24.21■■□□□ 1.47
TTC28-205ENST00000469670 HHIPL1Q96JK4 782 aa24.21■■□□□ 1.47
TTC28-205ENST00000469670 NLRP3Q96P20 1036 aa24.21■■□□□ 1.47
TTC28-205ENST00000469670 GLIS2Q9BZE0 524 aaPredicted RBP24.21■■□□□ 1.47
TTC28-205ENST00000469670 NUP98P52948 1817 aa24.2■■□□□ 1.46
TTC28-205ENST00000469670 GMPSP49915 693 aaPredicted RBP24.2■■□□□ 1.46
TTC28-205ENST00000469670 BRPF1P55201 1214 aaPredicted RBP24.2■■□□□ 1.46
TTC28-205ENST00000469670 GIGYF2Q6Y7W6 1299 aaKnown RBP24.2■■□□□ 1.46
TTC28-205ENST00000469670 SUPT20HQ8NEM7 779 aa24.2■■□□□ 1.46
TTC28-205ENST00000469670 CFAP44Q96MT7 982 aa24.2■■□□□ 1.46
TTC28-205ENST00000469670 PGAP2Q9UHJ9 254 aa24.19■■□□□ 1.46
TTC28-205ENST00000469670 PARP10Q53GL7 1025 aa24.18■■□□□ 1.46
TTC28-205ENST00000469670 RTFDC1Q9BY42 306 aaPredicted RBP24.18■■□□□ 1.46
TTC28-205ENST00000469670 ZNF408Q9H9D4 720 aa24.18■■□□□ 1.46
TTC28-205ENST00000469670 ABCC4O15439 1325 aa24.17■■□□□ 1.46
TTC28-205ENST00000469670 CIAPIN1Q6FI81 312 aa24.17■■□□□ 1.46
TTC28-205ENST00000469670 ZC3H15Q8WU90 426 aaKnown RBP24.17■■□□□ 1.46
TTC28-205ENST00000469670 CDHR2Q9BYE9 1310 aa24.16■■□□□ 1.46
TTC28-205ENST00000469670 SLC10A5Q5PT55 438 aa24.16■■□□□ 1.46
TTC28-205ENST00000469670 DPP8Q6V1X1 898 aaPredicted RBP24.16■■□□□ 1.46
TTC28-205ENST00000469670 BCL2L13Q9BXK5 485 aa24.16■■□□□ 1.46
TTC28-205ENST00000469670 NEFMP07197 916 aa24.15■■□□□ 1.46
TTC28-205ENST00000469670 HIRAP54198 1017 aaPredicted RBP24.15■■□□□ 1.46
TTC28-205ENST00000469670 UTP14AQ9BVJ6 771 aaKnown RBP24.15■■□□□ 1.46
TTC28-205ENST00000469670 KDM3BQ7LBC6 1761 aa24.15■■□□□ 1.46
TTC28-205ENST00000469670 ERBB4Q15303 1308 aa24.14■■□□□ 1.46
TTC28-205ENST00000469670 RAD17O75943 681 aa24.14■■□□□ 1.45
TTC28-205ENST00000469670 KIAA2012Q0VF49 1180 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms