RNA–Protein interactions for RNA: ENST00000469414.1

CIT-204, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-204ENST00000469414 NLRP3Q96P20 1036 aa12.58□□□□□ -0.4
CIT-204ENST00000469414 ZC3H4Q9UPT8 1303 aaKnown RBP12.58□□□□□ -0.4
CIT-204ENST00000469414 ABCC12Q96J65 1359 aa12.57□□□□□ -0.4
CIT-204ENST00000469414 LAMB4A4D0S4 1761 aa12.57□□□□□ -0.4
CIT-204ENST00000469414 BCORQ6W2J9 1755 aa12.57□□□□□ -0.4
CIT-204ENST00000469414 GLTPD2A6NH11 291 aa12.57□□□□□ -0.4
CIT-204ENST00000469414 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
CIT-204ENST00000469414 OLFM4Q6UX06 510 aa12.57□□□□□ -0.4
CIT-204ENST00000469414 RTKN2Q8IZC4 609 aa12.57□□□□□ -0.4
CIT-204ENST00000469414 PLBD2Q8NHP8 589 aa12.57□□□□□ -0.4
CIT-204ENST00000469414 CHMP4AQ9BY43 222 aa12.57□□□□□ -0.4
CIT-204ENST00000469414 TMX4Q9H1E5 349 aaPredicted RBP12.57□□□□□ -0.4
CIT-204ENST00000469414 TRMT112Q9UI30 125 aaKnown RBP12.57□□□□□ -0.4
CIT-204ENST00000469414 ATP5J2-PTCD1G3V325 749 aa12.56□□□□□ -0.4
CIT-204ENST00000469414 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
CIT-204ENST00000469414 NLRP10Q86W26 655 aa12.56□□□□□ -0.4
CIT-204ENST00000469414 WWC1Q8IX03 1113 aa12.56□□□□□ -0.4
CIT-204ENST00000469414 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
CIT-204ENST00000469414 C8orf58Q8NAV2 365 aa12.56□□□□□ -0.4
CIT-204ENST00000469414 C7orf43Q8WVR3 580 aa12.56□□□□□ -0.4
CIT-204ENST00000469414 BRCA1P38398 1863 aaKnown RBP12.56□□□□□ -0.4
CIT-204ENST00000469414 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
CIT-204ENST00000469414 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
CIT-204ENST00000469414 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
CIT-204ENST00000469414 VEGFAP15692 232 aaPredicted RBP12.55□□□□□ -0.4
CIT-204ENST00000469414 HSPA6P17066 643 aa12.55□□□□□ -0.4
CIT-204ENST00000469414 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
CIT-204ENST00000469414 GOLGA2Q08379 1002 aa12.55□□□□□ -0.4
CIT-204ENST00000469414 CRY2Q49AN0 593 aa12.55□□□□□ -0.4
CIT-204ENST00000469414 CCDC30Q5VVM6 783 aa12.55□□□□□ -0.4
CIT-204ENST00000469414 SYNE4Q8N205 404 aa12.55□□□□□ -0.4
CIT-204ENST00000469414 TSR2Q969E8 191 aaKnown RBP12.55□□□□□ -0.4
CIT-204ENST00000469414 ZNF277Q9NRM2 450 aaPredicted RBP12.55□□□□□ -0.4
CIT-204ENST00000469414 LTBP3Q9NS15 1303 aa12.55□□□□□ -0.4
CIT-204ENST00000469414 HOXA10P31260 410 aaPredicted RBP12.54□□□□□ -0.4
CIT-204ENST00000469414 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
CIT-204ENST00000469414 SLC10A5Q5PT55 438 aa12.54□□□□□ -0.4
CIT-204ENST00000469414 CC2D2BQ6DHV5 1058 aa12.54□□□□□ -0.4
CIT-204ENST00000469414 C3orf67Q6ZVT6 689 aa12.54□□□□□ -0.4
CIT-204ENST00000469414 CRAMP1Q96RY5 1269 aa12.54□□□□□ -0.4
CIT-204ENST00000469414 PHAXQ9H814 394 aaKnown RBP12.54□□□□□ -0.4
CIT-204ENST00000469414 ANKRD31Q8N7Z5 1873 aa12.54□□□□□ -0.4
CIT-204ENST00000469414 SH3TC1Q8TE82 1336 aa12.54□□□□□ -0.4
CIT-204ENST00000469414 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
CIT-204ENST00000469414 RTL5Q5HYW3 569 aaPredicted RBP12.53□□□□□ -0.4
CIT-204ENST00000469414 TSPYL6Q8N831 410 aa12.53□□□□□ -0.4
CIT-204ENST00000469414 RBM46Q8TBY0 533 aaKnown RBP12.53□□□□□ -0.4
CIT-204ENST00000469414 STK31Q9BXU1 1019 aa12.53□□□□□ -0.4
CIT-204ENST00000469414 RNF123Q5XPI4 1314 aa12.53□□□□□ -0.4
CIT-204ENST00000469414 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.41
CIT-204ENST00000469414 DDX58O95786 925 aaKnown RBP12.52□□□□□ -0.41
CIT-204ENST00000469414 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.41
CIT-204ENST00000469414 FAM89AQ96GI7 184 aa12.52□□□□□ -0.41
CIT-204ENST00000469414 ISCA1Q9BUE6 129 aa12.52□□□□□ -0.41
CIT-204ENST00000469414 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
CIT-204ENST00000469414 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
CIT-204ENST00000469414 IARSP41252 1262 aaKnown RBP12.51□□□□□ -0.41
CIT-204ENST00000469414 FSTL1Q12841 308 aa12.51□□□□□ -0.41
CIT-204ENST00000469414 TWISTNBQ3B726 338 aaPredicted RBP12.51□□□□□ -0.41
CIT-204ENST00000469414 GRIPAP1Q4V328 841 aa12.51□□□□□ -0.41
CIT-204ENST00000469414 JDP2Q8WYK2 163 aa12.51□□□□□ -0.41
CIT-204ENST00000469414 MYD88Q99836 296 aa12.51□□□□□ -0.41
CIT-204ENST00000469414 BBOX1O75936 387 aa12.5□□□□□ -0.41
CIT-204ENST00000469414 WDR63Q8IWG1 891 aa12.5□□□□□ -0.41
CIT-204ENST00000469414 SMC1BQ8NDV3 1235 aa12.5□□□□□ -0.41
CIT-204ENST00000469414 PSMD1Q99460 953 aa12.5□□□□□ -0.41
CIT-204ENST00000469414 IL16Q14005 1332 aa12.5□□□□□ -0.41
CIT-204ENST00000469414 RIC1Q4ADV7 1423 aa12.5□□□□□ -0.41
CIT-204ENST00000469414 SLX4Q8IY92 1834 aa12.5□□□□□ -0.41
CIT-204ENST00000469414 ABCC4O15439 1325 aa12.49□□□□□ -0.41
CIT-204ENST00000469414 IRS4O14654 1257 aaPredicted RBP12.49□□□□□ -0.41
CIT-204ENST00000469414 HOXD11P31277 338 aaPredicted RBP12.49□□□□□ -0.41
CIT-204ENST00000469414 APLP1P51693 650 aa12.49□□□□□ -0.41
CIT-204ENST00000469414 TRIM28Q13263 835 aaKnown RBP12.49□□□□□ -0.41
CIT-204ENST00000469414 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
CIT-204ENST00000469414 ATP6V0A2Q9Y487 856 aa12.49□□□□□ -0.41
CIT-204ENST00000469414 NUP98P52948 1817 aa12.48□□□□□ -0.41
CIT-204ENST00000469414 SLC4A2P04920 1241 aa12.48□□□□□ -0.41
CIT-204ENST00000469414 HSP90B1P14625 803 aaKnown RBP12.48□□□□□ -0.41
CIT-204ENST00000469414 EIF6P56537 245 aaKnown RBP12.48□□□□□ -0.41
CIT-204ENST00000469414 GRAPQ13588 217 aa12.48□□□□□ -0.41
CIT-204ENST00000469414 DPP8Q6V1X1 898 aaPredicted RBP12.48□□□□□ -0.41
CIT-204ENST00000469414 GRAPLQ8TC17 118 aaPredicted RBP12.48□□□□□ -0.41
CIT-204ENST00000469414 MAP3K2Q9Y2U5 619 aa12.48□□□□□ -0.41
CIT-204ENST00000469414 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 IQCA1LA6NCM1 817 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 POTECB2RU33 542 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 NEXNQ0ZGT2 675 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 SLC51AQ86UW1 340 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 SP8Q8IXZ3 490 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 MPNDQ8N594 471 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 PI4KAP1Q8N8J0 262 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 ZBTB38Q8NAP3 1195 aaPredicted RBP12.47□□□□□ -0.41
CIT-204ENST00000469414 CCDC191Q8NCU4 936 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 SUPT20HQ8NEM7 779 aa12.47□□□□□ -0.41
CIT-204ENST00000469414 JARID2Q92833 1246 aaPredicted RBP12.47□□□□□ -0.41
CIT-204ENST00000469414 METTL22Q9BUU2 404 aaPredicted RBP12.47□□□□□ -0.41
CIT-204ENST00000469414 CWC25Q9NXE8 425 aaPredicted RBP12.47□□□□□ -0.41
CIT-204ENST00000469414 GJA3Q9Y6H8 435 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms