RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 NUDCQ9Y266 331 aa17.12■□□□□ 0.33
TRAPPC12-216ENST00000469400 COL4A5P29400 1685 aa17.11■□□□□ 0.33
TRAPPC12-216ENST00000469400 EPS15P42566 896 aa17.11■□□□□ 0.33
TRAPPC12-216ENST00000469400 SCNN1DP51172 638 aa17.11■□□□□ 0.33
TRAPPC12-216ENST00000469400 FAM161AQ3B820 660 aa17.11■□□□□ 0.33
TRAPPC12-216ENST00000469400 CAPNS2Q96L46 248 aa17.11■□□□□ 0.33
TRAPPC12-216ENST00000469400 HTATSF1O43719 755 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-216ENST00000469400 HOXA10P31260 410 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC12-216ENST00000469400 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC12-216ENST00000469400 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC12-216ENST00000469400 LARGE2Q8N3Y3 721 aa17.1■□□□□ 0.33
TRAPPC12-216ENST00000469400 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
TRAPPC12-216ENST00000469400 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
TRAPPC12-216ENST00000469400 ERVV-1B6SEH8 477 aa17.09■□□□□ 0.33
TRAPPC12-216ENST00000469400 SLC34A2O95436 690 aa17.09■□□□□ 0.33
TRAPPC12-216ENST00000469400 ECE1P42892 770 aa17.09■□□□□ 0.33
TRAPPC12-216ENST00000469400 CST9Q5W186 159 aa17.09■□□□□ 0.33
TRAPPC12-216ENST00000469400 CYP4F22Q6NT55 531 aa17.09■□□□□ 0.33
TRAPPC12-216ENST00000469400 RPGRQ92834 1020 aaKnown RBP17.09■□□□□ 0.33
TRAPPC12-216ENST00000469400 GPR101Q96P66 508 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC12-216ENST00000469400 BEGAINQ9BUH8 593 aa17.09■□□□□ 0.33
TRAPPC12-216ENST00000469400 LTBP1Q14766 1721 aa17.08■□□□□ 0.32
TRAPPC12-216ENST00000469400 TRAF5O00463 557 aa17.08■□□□□ 0.32
TRAPPC12-216ENST00000469400 GRM1Q13255 1194 aa17.08■□□□□ 0.32
TRAPPC12-216ENST00000469400 GRIPAP1Q4V328 841 aa17.08■□□□□ 0.32
TRAPPC12-216ENST00000469400 USP50Q70EL3 339 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC12-216ENST00000469400 SLC51AQ86UW1 340 aa17.08■□□□□ 0.32
TRAPPC12-216ENST00000469400 MAP3K15Q6ZN16 1313 aa17.07■□□□□ 0.32
TRAPPC12-216ENST00000469400 CRAMP1Q96RY5 1269 aa17.07■□□□□ 0.32
TRAPPC12-216ENST00000469400 UBN2Q6ZU65 1347 aa17.06■□□□□ 0.32
TRAPPC12-216ENST00000469400 CCDC85CA6NKD9 419 aa17.06■□□□□ 0.32
TRAPPC12-216ENST00000469400 TCERG1O14776 1098 aaKnown RBP17.06■□□□□ 0.32
TRAPPC12-216ENST00000469400 GPTP24298 496 aa17.06■□□□□ 0.32
TRAPPC12-216ENST00000469400 SUSD4Q5VX71 490 aa17.06■□□□□ 0.32
TRAPPC12-216ENST00000469400 TTLL7Q6ZT98 887 aa17.06■□□□□ 0.32
TRAPPC12-216ENST00000469400 RBM17Q96I25 401 aaKnown RBP17.06■□□□□ 0.32
TRAPPC12-216ENST00000469400 RRP7AQ9Y3A4 280 aaKnown RBP17.06■□□□□ 0.32
TRAPPC12-216ENST00000469400 TLL2Q9Y6L7 1015 aa17.06■□□□□ 0.32
TRAPPC12-216ENST00000469400 PPEF1O14829 653 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC12-216ENST00000469400 KIF6Q6ZMV9 814 aa17.05■□□□□ 0.32
TRAPPC12-216ENST00000469400 NIM1KQ8IY84 436 aa17.05■□□□□ 0.32
TRAPPC12-216ENST00000469400 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
TRAPPC12-216ENST00000469400 IBTKQ9P2D0 1353 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC12-216ENST00000469400 THSD7BQ9C0I4 1608 aa17.04■□□□□ 0.32
TRAPPC12-216ENST00000469400 PPIP5K2O43314 1243 aa17.04■□□□□ 0.32
TRAPPC12-216ENST00000469400 PPP2R1AP30153 589 aa17.04■□□□□ 0.32
TRAPPC12-216ENST00000469400 C3orf67Q6ZVT6 689 aa17.04■□□□□ 0.32
TRAPPC12-216ENST00000469400 ZBTB3Q9H5J0 574 aa17.04■□□□□ 0.32
TRAPPC12-216ENST00000469400 TSKSQ9UJT2 592 aa17.04■□□□□ 0.32
TRAPPC12-216ENST00000469400 AOC2O75106 756 aa17.03■□□□□ 0.32
TRAPPC12-216ENST00000469400 MYL6BP14649 208 aa17.03■□□□□ 0.32
TRAPPC12-216ENST00000469400 MAP2K2P36507 400 aa17.03■□□□□ 0.32
TRAPPC12-216ENST00000469400 MLLT1Q03111 559 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC12-216ENST00000469400 AOC3Q16853 763 aa17.03■□□□□ 0.32
TRAPPC12-216ENST00000469400 ZNF34Q8IZ26 560 aa17.03■□□□□ 0.32
TRAPPC12-216ENST00000469400 ADARB2Q9NS39 739 aaKnown RBP17.03■□□□□ 0.32
TRAPPC12-216ENST00000469400 GPRC5DQ9NZD1 345 aa17.03■□□□□ 0.32
TRAPPC12-216ENST00000469400 NTSR2O95665 410 aa17.02■□□□□ 0.32
TRAPPC12-216ENST00000469400 RGS19P49795 217 aa17.02■□□□□ 0.32
TRAPPC12-216ENST00000469400 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
TRAPPC12-216ENST00000469400 SAPCD2Q86UD0 394 aa17.02■□□□□ 0.32
TRAPPC12-216ENST00000469400 PNISRQ8TF01 805 aaKnown RBP17.02■□□□□ 0.32
TRAPPC12-216ENST00000469400 CELF2O95319 508 aaKnown RBP17.01■□□□□ 0.31
TRAPPC12-216ENST00000469400 CXCL9Q07325 125 aa17.01■□□□□ 0.31
TRAPPC12-216ENST00000469400 TMX4Q9H1E5 349 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC12-216ENST00000469400 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
TRAPPC12-216ENST00000469400 ATP6V0A2Q9Y487 856 aa17.01■□□□□ 0.31
TRAPPC12-216ENST00000469400 NUP98P52948 1817 aa17■□□□□ 0.31
TRAPPC12-216ENST00000469400 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
TRAPPC12-216ENST00000469400 GIGYF2Q6Y7W6 1299 aaKnown RBP17■□□□□ 0.31
TRAPPC12-216ENST00000469400 PPP1R42Q7Z4L9 355 aa17■□□□□ 0.31
TRAPPC12-216ENST00000469400 NLRP3Q96P20 1036 aa17■□□□□ 0.31
TRAPPC12-216ENST00000469400 ZNRF3Q9ULT6 936 aa17■□□□□ 0.31
TRAPPC12-216ENST00000469400 CA12O43570 354 aa16.99■□□□□ 0.31
TRAPPC12-216ENST00000469400 GMPSP49915 693 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC12-216ENST00000469400 RTFDC1Q9BY42 306 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC12-216ENST00000469400 GLIS2Q9BZE0 524 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC12-216ENST00000469400 TRPM7Q96QT4 1865 aa16.99■□□□□ 0.31
TRAPPC12-216ENST00000469400 PARP10Q53GL7 1025 aa16.98■□□□□ 0.31
TRAPPC12-216ENST00000469400 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
TRAPPC12-216ENST00000469400 SUPT20HQ8NEM7 779 aa16.98■□□□□ 0.31
TRAPPC12-216ENST00000469400 HHIPL1Q96JK4 782 aa16.98■□□□□ 0.31
TRAPPC12-216ENST00000469400 THUMPD2Q9BTF0 503 aaKnown RBP16.98■□□□□ 0.31
TRAPPC12-216ENST00000469400 PGAP2Q9UHJ9 254 aa16.98■□□□□ 0.31
TRAPPC12-216ENST00000469400 ABCC4O15439 1325 aa16.97■□□□□ 0.31
TRAPPC12-216ENST00000469400 BRPF1P55201 1214 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC12-216ENST00000469400 UTP14AQ9BVJ6 771 aaKnown RBP16.97■□□□□ 0.31
TRAPPC12-216ENST00000469400 MCOLN1Q9GZU1 580 aa16.97■□□□□ 0.31
TRAPPC12-216ENST00000469400 NEFMP07197 916 aa16.96■□□□□ 0.31
TRAPPC12-216ENST00000469400 HIRAP54198 1017 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC12-216ENST00000469400 CIAPIN1Q6FI81 312 aa16.96■□□□□ 0.31
TRAPPC12-216ENST00000469400 DPP8Q6V1X1 898 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC12-216ENST00000469400 ZC3H15Q8WU90 426 aaKnown RBP16.96■□□□□ 0.31
TRAPPC12-216ENST00000469400 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.31
TRAPPC12-216ENST00000469400 ERBB4Q15303 1308 aa16.96■□□□□ 0.3
TRAPPC12-216ENST00000469400 KDM3BQ7LBC6 1761 aa16.95■□□□□ 0.3
TRAPPC12-216ENST00000469400 BBOX1O75936 387 aa16.95■□□□□ 0.3
TRAPPC12-216ENST00000469400 RAD17O75943 681 aa16.95■□□□□ 0.3
TRAPPC12-216ENST00000469400 KIAA2012Q0VF49 1180 aa16.95■□□□□ 0.3
TRAPPC12-216ENST00000469400 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms