RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 MYRIPQ8NFW9 859 aa14.42□□□□□ -0.1
VARS2-205ENST00000469358 CEMIPQ8WUJ3 1361 aa14.42□□□□□ -0.1
VARS2-205ENST00000469358 SLC27A2O14975 620 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 LARP1Q6PKG0 1096 aaKnown RBP14.41□□□□□ -0.1
VARS2-205ENST00000469358 RUFY2Q8WXA3 655 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 LRRC37A3O60309 1634 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 TTC41PQ6P2S7 1318 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 PTGS1P23219 599 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 FSD1Q9BTV5 496 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 ATP6V1DQ9Y5K8 247 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 A0A087WWV3 80 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 JAK2O60674 1132 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 ZKSCAN1P17029 563 aaPredicted RBP14.41□□□□□ -0.1
VARS2-205ENST00000469358 LRMPQ12912 555 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 SLC39A6Q13433 755 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 LRRC2Q9BYS8 371 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 DACT1Q9NYF0 836 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 NRBP1Q9UHY1 535 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 PXDNLA1KZ92 1463 aa14.41□□□□□ -0.1
VARS2-205ENST00000469358 MYL6BP14649 208 aa14.4□□□□□ -0.1
VARS2-205ENST00000469358 CEBPZQ03701 1054 aaKnown RBP14.4□□□□□ -0.1
VARS2-205ENST00000469358 HSP90AB4PQ58FF6 505 aa14.4□□□□□ -0.1
VARS2-205ENST00000469358 SLFNL1Q499Z3 407 aa14.4□□□□□ -0.1
VARS2-205ENST00000469358 DBF4Q9UBU7 674 aaPredicted RBP14.4□□□□□ -0.1
VARS2-205ENST00000469358 TBX22Q9Y458 520 aa14.4□□□□□ -0.1
VARS2-205ENST00000469358 CCDC129Q6ZRS4 1044 aa14.4□□□□□ -0.1
VARS2-205ENST00000469358 EVI5LQ96CN4 794 aa14.4□□□□□ -0.1
VARS2-205ENST00000469358 IP6K1Q92551 441 aa14.39□□□□□ -0.11
VARS2-205ENST00000469358 GIGYF1O75420 1035 aaPredicted RBP14.39□□□□□ -0.11
VARS2-205ENST00000469358 EPHA10Q5JZY3 1008 aa14.39□□□□□ -0.11
VARS2-205ENST00000469358 MAP4K1Q92918 833 aa14.39□□□□□ -0.11
VARS2-205ENST00000469358 MRVI1Q9Y6F6 885 aa14.39□□□□□ -0.11
VARS2-205ENST00000469358 USP42Q9H9J4 1324 aaKnown RBP14.39□□□□□ -0.11
VARS2-205ENST00000469358 LETM1O95202 739 aaPredicted RBP14.38□□□□□ -0.11
VARS2-205ENST00000469358 SEC62Q99442 399 aaKnown RBP14.38□□□□□ -0.11
VARS2-205ENST00000469358 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 EPB41L2O43491 1005 aaKnown RBP14.38□□□□□ -0.11
VARS2-205ENST00000469358 CBX1P83916 185 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 G3BP1Q13283 466 aaKnown RBP eCLIP14.38□□□□□ -0.119e-7■■□□□ 11.6
VARS2-205ENST00000469358 ESCO1Q5FWF5 840 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 KSR2Q6VAB6 950 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 KIAA1524Q8TCG1 905 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 CCDC192P0DO97 292 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 TYRO3Q06418 890 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 TOB2Q14106 344 aaPredicted RBP14.38□□□□□ -0.11
VARS2-205ENST00000469358 ANO6Q4KMQ2 910 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 GPATCH3Q96I76 525 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 NUP62CLQ9H1M0 184 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 BABAM1Q9NWV8 329 aa14.38□□□□□ -0.11
VARS2-205ENST00000469358 GRM8O00222 908 aa14.37□□□□□ -0.11
VARS2-205ENST00000469358 KRT85P78386 507 aa14.37□□□□□ -0.11
VARS2-205ENST00000469358 BLOC1S2Q6QNY1 142 aa14.37□□□□□ -0.11
VARS2-205ENST00000469358 SH2B1Q9NRF2 756 aaPredicted RBP14.37□□□□□ -0.11
VARS2-205ENST00000469358 PXDNQ92626 1479 aa14.37□□□□□ -0.11
VARS2-205ENST00000469358 RNMTO43148 476 aaKnown RBP14.37□□□□□ -0.11
VARS2-205ENST00000469358 ZSCAN31Q96LW9 406 aaPredicted RBP14.37□□□□□ -0.11
VARS2-205ENST00000469358 FTOQ9C0B1 505 aaKnown RBP eCLIP14.37□□□□□ -0.11
VARS2-205ENST00000469358 SPDYE4A6NLX3 237 aa14.37□□□□□ -0.11
VARS2-205ENST00000469358 PSME1Q06323 249 aa14.37□□□□□ -0.11
VARS2-205ENST00000469358 MTX1Q13505 466 aa14.37□□□□□ -0.11
VARS2-205ENST00000469358 MAP7D2Q96T17 732 aa14.37□□□□□ -0.11
VARS2-205ENST00000469358 BCL2L12Q9HB09 334 aa14.37□□□□□ -0.11
VARS2-205ENST00000469358 RIOK3O14730 519 aaKnown RBP14.36□□□□□ -0.11
VARS2-205ENST00000469358 NR1I2O75469 434 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 MAP3K11Q16584 847 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 CCDC186Q7Z3E2 898 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 DRC7Q8IY82 874 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 SPATA32Q96LK8 384 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 SPTLC3Q9NUV7 552 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 GOLGA6L4A6NEF3 574 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 IGKV5-2P06315 115 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 AKAP4Q5JQC9 854 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 TM6SF1Q9BZW5 370 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 CBX8Q9HC52 389 aa14.36□□□□□ -0.11
VARS2-205ENST00000469358 C1orf141Q5JVX7 400 aa14.35□□□□□ -0.11
VARS2-205ENST00000469358 FBXW7Q969H0 707 aa14.35□□□□□ -0.11
VARS2-205ENST00000469358 KIF13AQ9H1H9 1805 aa14.35□□□□□ -0.11
VARS2-205ENST00000469358 ATP2B3Q16720 1220 aa14.35□□□□□ -0.11
VARS2-205ENST00000469358 ERCC4Q92889 916 aaPredicted RBP14.35□□□□□ -0.11
VARS2-205ENST00000469358 KCNB2Q92953 911 aa14.35□□□□□ -0.11
VARS2-205ENST00000469358 PGBD1Q96JS3 809 aa14.35□□□□□ -0.11
VARS2-205ENST00000469358 DNAJC25Q9H1X3 360 aa14.35□□□□□ -0.11
VARS2-205ENST00000469358 KIF3AQ9Y496 699 aa14.35□□□□□ -0.11
VARS2-205ENST00000469358 RPS6KB1P23443 525 aa14.35□□□□□ -0.11
VARS2-205ENST00000469358 DNAJC2Q99543 621 aaKnown RBP14.35□□□□□ -0.11
VARS2-205ENST00000469358 COL15A1P39059 1388 aa14.35□□□□□ -0.11
VARS2-205ENST00000469358 PPP4R3BQ5MIZ7 849 aa14.34□□□□□ -0.11
VARS2-205ENST00000469358 RIC3Q7Z5B4 369 aa14.34□□□□□ -0.11
VARS2-205ENST00000469358 FAM200AQ8TCP9 573 aa14.34□□□□□ -0.11
VARS2-205ENST00000469358 BICD2Q8TD16 824 aa14.34□□□□□ -0.11
VARS2-205ENST00000469358 C16orf45Q96MC5 204 aaPredicted RBP14.34□□□□□ -0.11
VARS2-205ENST00000469358 ZHX1Q9UKY1 873 aaPredicted RBP14.34□□□□□ -0.11
VARS2-205ENST00000469358 AXIN2Q9Y2T1 843 aa14.34□□□□□ -0.11
VARS2-205ENST00000469358 A0A0G2JLW4 131 aa14.34□□□□□ -0.11
VARS2-205ENST00000469358 NAA30Q147X3 362 aaPredicted RBP14.34□□□□□ -0.11
VARS2-205ENST00000469358 PLEKHO1Q53GL0 409 aaPredicted RBP14.34□□□□□ -0.11
VARS2-205ENST00000469358 LEO1Q8WVC0 666 aaPredicted RBP14.34□□□□□ -0.11
VARS2-205ENST00000469358 PRDM4Q9UKN5 801 aa14.34□□□□□ -0.11
VARS2-205ENST00000469358 PRIMPOLQ96LW4 560 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms