RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CORO7P57737 925 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 SATB1Q01826 763 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 IQCB1Q15051 598 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 ZRSR1Q15695 479 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 LRRFIP1Q32MZ4 808 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 ILDR1Q86SU0 546 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 TTC6Q86TZ1 520 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 EFCAB13Q8IY85 973 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 GPR161Q8N6U8 529 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 PPP1R13BQ96KQ4 1090 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 FAM107BQ9H098 131 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 TRMT1Q9NXH9 659 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 ADAM21Q9UKJ8 722 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 ADGRB3O60242 1522 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 GOLGA6L4A6NEF3 574 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 NPHP1O15259 732 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 CTAGE5O15320 804 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 NFE2L2Q16236 605 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 TACO1Q9BSH4 297 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 ARFGAP3Q9NP61 516 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 DACT1Q9NYF0 836 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 ADGRF5Q8IZF2 1346 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 MSH6P52701 1360 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 ITSN1Q15811 1721 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 MYH15Q9Y2K3 1946 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 CCDC196A0A1B0GTZ2 297 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 EIF3CLB5ME19 914 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 PDCP20941 246 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 GJB2P29033 226 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 AK2P54819 239 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 STX1AQ16623 288 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 CKAP2LQ8IYA6 745 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 GPATCH11Q8N954 259 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 EIF3CQ99613 913 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 DNAJC25Q9H1X3 360 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 ZSCAN16Q9H4T2 348 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 STAP2Q9UGK3 403 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 EVC2Q86UK5 1308 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 ABCC1P33527 1531 aa10.56□□□□□ -0.72
SMARCE1-207ENST00000469334 CRYBG1Q9Y4K1 1723 aa10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 ATP6V1AP38606 617 aa10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 ETF1P62495 437 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 TRDNQ13061 729 aa10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 CAMK4Q16566 473 aa10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 TPRNQ4KMQ1 711 aa10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 RUFY3Q7L099 469 aa10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 TSPYL6Q8N831 410 aa10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 TOMM22Q9NS69 142 aa10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 N4BP2Q86UW6 1770 aaPredicted RBP10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 SASH3O75995 380 aa10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 E4F1Q66K89 784 aaPredicted RBP10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 MBIPQ9NS73 344 aa10.55□□□□□ -0.72
SMARCE1-207ENST00000469334 MRC2Q9UBG0 1479 aa10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 USP8P40818 1118 aa10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 LRRN4CLQ8ND94 238 aa10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 PPP6R1Q9UPN7 881 aa10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 SNX14Q9Y5W7 946 aa10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 CLTCQ00610 1675 aaKnown RBP10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 GIGYF1O75420 1035 aaPredicted RBP10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 SEC31AO94979 1220 aaKnown RBP10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 SMC2O95347 1197 aa10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 ARID5BQ14865 1188 aa10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 BRD3Q15059 726 aa10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 ANKRD20A12PQ8NF67 263 aa10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 FUT8Q9BYC5 575 aa10.54□□□□□ -0.72
SMARCE1-207ENST00000469334 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
SMARCE1-207ENST00000469334 CCDC151A5D8V7 595 aa10.53□□□□□ -0.72
SMARCE1-207ENST00000469334 EIF3JO75822 258 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-207ENST00000469334 EVCP57679 992 aa10.53□□□□□ -0.72
SMARCE1-207ENST00000469334 PSME1Q06323 249 aa10.53□□□□□ -0.72
SMARCE1-207ENST00000469334 VPS53Q5VIR6 699 aa10.53□□□□□ -0.72
SMARCE1-207ENST00000469334 FCHSD1Q86WN1 690 aa10.53□□□□□ -0.72
SMARCE1-207ENST00000469334 DHX37Q8IY37 1157 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-207ENST00000469334 RABGGTAQ92696 567 aa10.53□□□□□ -0.72
SMARCE1-207ENST00000469334 SPATA32Q96LK8 384 aa10.53□□□□□ -0.72
SMARCE1-207ENST00000469334 ZFYVE16Q7Z3T8 1539 aa10.52□□□□□ -0.72
SMARCE1-207ENST00000469334 A0A087WUV0 522 aaPredicted RBP10.52□□□□□ -0.72
SMARCE1-207ENST00000469334 BECN2A8MW95 431 aa10.52□□□□□ -0.72
SMARCE1-207ENST00000469334 MAP2K7O14733 419 aa10.52□□□□□ -0.72
SMARCE1-207ENST00000469334 PRR29P0C7W0 189 aa10.52□□□□□ -0.72
SMARCE1-207ENST00000469334 MAP2K2P36507 400 aa10.52□□□□□ -0.72
SMARCE1-207ENST00000469334 EIF5P55010 431 aaKnown RBP10.52□□□□□ -0.72
SMARCE1-207ENST00000469334 TM6SF1Q9BZW5 370 aa10.52□□□□□ -0.72
SMARCE1-207ENST00000469334 LRRCC1Q9C099 1032 aa10.52□□□□□ -0.72
SMARCE1-207ENST00000469334 ZCCHC17Q9NP64 241 aaKnown RBP10.52□□□□□ -0.72
SMARCE1-207ENST00000469334 RIMS2Q9UQ26 1411 aa10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 APBB1O00213 710 aa10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 SFPQP23246 707 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 TADA2BQ86TJ2 420 aa10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 CNPY4Q8N129 248 aa10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 HNRNPLLQ8WVV9 542 aaKnown RBP10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 MPHOSPH8Q99549 860 aa10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 UTP14AQ9BVJ6 771 aaKnown RBP10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 ANO10Q9NW15 660 aa10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 KCNG1Q9UIX4 513 aa10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 SUFUQ9UMX1 484 aa10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 USP16Q9Y5T5 823 aa10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 A0A1W2PP64 1363 aa10.52□□□□□ -0.73
SMARCE1-207ENST00000469334 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 SRGAP3O43295 1099 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms