RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 TRPA1O75762 1119 aa17.26■□□□□ 0.35
HDAC6-217ENST00000469223 A1BGP04217 495 aa17.26■□□□□ 0.35
HDAC6-217ENST00000469223 SLC51AQ86UW1 340 aa17.26■□□□□ 0.35
HDAC6-217ENST00000469223 A0A0C4DFX4 3053 aa17.25■□□□□ 0.35
HDAC6-217ENST00000469223 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
HDAC6-217ENST00000469223 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
HDAC6-217ENST00000469223 NIM1KQ8IY84 436 aa17.25■□□□□ 0.35
HDAC6-217ENST00000469223 CENPFP49454 3210 aa17.24■□□□□ 0.35
HDAC6-217ENST00000469223 FAM155AB1AL88 458 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-217ENST00000469223 PIP4K2AP48426 406 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-217ENST00000469223 RNF186Q9NXI6 227 aa17.24■□□□□ 0.35
HDAC6-217ENST00000469223 ABCC12Q96J65 1359 aa17.24■□□□□ 0.35
HDAC6-217ENST00000469223 IL13P35225 146 aa17.23■□□□□ 0.35
HDAC6-217ENST00000469223 GMPSP49915 693 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-217ENST00000469223 KIF23Q02241 960 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-217ENST00000469223 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-217ENST00000469223 ZNF652Q9Y2D9 606 aa17.23■□□□□ 0.35
HDAC6-217ENST00000469223 NPC1L1Q9UHC9 1359 aa17.23■□□□□ 0.35
HDAC6-217ENST00000469223 NUP98P52948 1817 aa17.22■□□□□ 0.35
HDAC6-217ENST00000469223 RGMBQ6NW40 437 aa17.22■□□□□ 0.35
HDAC6-217ENST00000469223 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
HDAC6-217ENST00000469223 FXR1P51114 621 aaKnown RBP eCLIP17.21■□□□□ 0.35
HDAC6-217ENST00000469223 MTHFSDQ2M296 383 aaKnown RBP17.21■□□□□ 0.35
HDAC6-217ENST00000469223 ZNF790Q6PG37 636 aa17.21■□□□□ 0.35
HDAC6-217ENST00000469223 DLK2Q6UY11 383 aa17.21■□□□□ 0.35
HDAC6-217ENST00000469223 TPTE2Q6XPS3 522 aa17.21■□□□□ 0.35
HDAC6-217ENST00000469223 TRPM4Q8TD43 1214 aa17.21■□□□□ 0.35
HDAC6-217ENST00000469223 PGAP2Q9UHJ9 254 aa17.21■□□□□ 0.35
HDAC6-217ENST00000469223 KIAA0100Q14667 2235 aaKnown RBP17.21■□□□□ 0.35
HDAC6-217ENST00000469223 BRCA2P51587 3418 aa17.21■□□□□ 0.34
HDAC6-217ENST00000469223 RBBP6Q7Z6E9 1792 aaKnown RBP17.2■□□□□ 0.34
HDAC6-217ENST00000469223 PPIP5K2O43314 1243 aa17.2■□□□□ 0.34
HDAC6-217ENST00000469223 HMOX1P09601 288 aa17.2■□□□□ 0.34
HDAC6-217ENST00000469223 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
HDAC6-217ENST00000469223 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
HDAC6-217ENST00000469223 CDC37L1Q7L3B6 337 aa17.2■□□□□ 0.34
HDAC6-217ENST00000469223 RIC1Q4ADV7 1423 aa17.2■□□□□ 0.34
HDAC6-217ENST00000469223 HIRAP54198 1017 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-217ENST00000469223 AOC3Q16853 763 aa17.19■□□□□ 0.34
HDAC6-217ENST00000469223 FMNL2Q96PY5 1086 aa17.19■□□□□ 0.34
HDAC6-217ENST00000469223 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
HDAC6-217ENST00000469223 PAPPA2Q9BXP8 1791 aa17.19■□□□□ 0.34
HDAC6-217ENST00000469223 LAMB4A4D0S4 1761 aa17.18■□□□□ 0.34
HDAC6-217ENST00000469223 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
HDAC6-217ENST00000469223 CRY2Q49AN0 593 aa17.18■□□□□ 0.34
HDAC6-217ENST00000469223 USP48Q86UV5 1035 aa17.18■□□□□ 0.34
HDAC6-217ENST00000469223 ZC3H15Q8WU90 426 aaKnown RBP17.18■□□□□ 0.34
HDAC6-217ENST00000469223 CDHR2Q9BYE9 1310 aa17.18■□□□□ 0.34
HDAC6-217ENST00000469223 ZNF157P51786 506 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-217ENST00000469223 CXCL9Q07325 125 aa17.17■□□□□ 0.34
HDAC6-217ENST00000469223 TEFQ10587 303 aa17.17■□□□□ 0.34
HDAC6-217ENST00000469223 SHTN1A0MZ66 631 aa17.16■□□□□ 0.34
HDAC6-217ENST00000469223 PPEF1O14829 653 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-217ENST00000469223 SLC10A3P09131 477 aa17.16■□□□□ 0.34
HDAC6-217ENST00000469223 GTF2E1P29083 439 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-217ENST00000469223 RPGRQ92834 1020 aaKnown RBP17.16■□□□□ 0.34
HDAC6-217ENST00000469223 CCDC102AQ96A19 550 aa17.16■□□□□ 0.34
HDAC6-217ENST00000469223 GBA2Q9HCG7 927 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-217ENST00000469223 LAMB2P55268 1798 aa17.15■□□□□ 0.34
HDAC6-217ENST00000469223 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
HDAC6-217ENST00000469223 NUTM1Q86Y26 1132 aa17.15■□□□□ 0.34
HDAC6-217ENST00000469223 CSRNP1Q96S65 589 aa17.15■□□□□ 0.34
HDAC6-217ENST00000469223 BCL2L13Q9BXK5 485 aa17.15■□□□□ 0.34
HDAC6-217ENST00000469223 RANBP2P49792 3224 aaKnown RBP17.15■□□□□ 0.34
HDAC6-217ENST00000469223 PKN2Q16513 984 aaKnown RBP17.14■□□□□ 0.33
HDAC6-217ENST00000469223 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.33
HDAC6-217ENST00000469223 HDAC9Q9UKV0 1011 aa17.14■□□□□ 0.33
HDAC6-217ENST00000469223 ZNRF3Q9ULT6 936 aa17.14■□□□□ 0.33
HDAC6-217ENST00000469223 C2orf69Q8N8R5 385 aa17.13■□□□□ 0.33
HDAC6-217ENST00000469223 COL6A3P12111 3177 aa17.12■□□□□ 0.33
HDAC6-217ENST00000469223 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
HDAC6-217ENST00000469223 ADM5C9JUS6 153 aa17.12■□□□□ 0.33
HDAC6-217ENST00000469223 KCNQ3O43525 872 aa17.12■□□□□ 0.33
HDAC6-217ENST00000469223 RAD17O75943 681 aa17.12■□□□□ 0.33
HDAC6-217ENST00000469223 KRT26Q7Z3Y9 468 aa17.12■□□□□ 0.33
HDAC6-217ENST00000469223 ZNF296Q8WUU4 475 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-217ENST00000469223 USP16Q9Y5T5 823 aa17.12■□□□□ 0.33
HDAC6-217ENST00000469223 DDX60Q8IY21 1712 aaKnown RBP17.11■□□□□ 0.33
HDAC6-217ENST00000469223 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-217ENST00000469223 HLFQ16534 295 aa17.11■□□□□ 0.33
HDAC6-217ENST00000469223 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
HDAC6-217ENST00000469223 FBXO46Q6PJ61 603 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-217ENST00000469223 IL17REQ8NFR9 667 aa17.1■□□□□ 0.33
HDAC6-217ENST00000469223 CNOT7Q9UIV1 285 aaKnown RBP17.1■□□□□ 0.33
HDAC6-217ENST00000469223 KIF7Q2M1P5 1343 aa17.1■□□□□ 0.33
HDAC6-217ENST00000469223 DLL1O00548 723 aa17.09■□□□□ 0.33
HDAC6-217ENST00000469223 RGL2O15211 777 aa17.09■□□□□ 0.33
HDAC6-217ENST00000469223 RASAL3Q86YV0 1011 aa17.09■□□□□ 0.33
HDAC6-217ENST00000469223 RBM17Q96I25 401 aaKnown RBP17.09■□□□□ 0.33
HDAC6-217ENST00000469223 NYXQ9GZU5 481 aa17.09■□□□□ 0.33
HDAC6-217ENST00000469223 DUOX1Q9NRD9 1551 aa17.09■□□□□ 0.33
HDAC6-217ENST00000469223 TAF1P21675 1872 aa17.09■□□□□ 0.33
HDAC6-217ENST00000469223 NBPF26B4DH59 902 aa17.08■□□□□ 0.32
HDAC6-217ENST00000469223 H7C1D1 291 aa17.08■□□□□ 0.32
HDAC6-217ENST00000469223 NBPF10Q6P3W6 841 aaKnown RBP17.08■□□□□ 0.32
HDAC6-217ENST00000469223 EGFRP00533 1210 aa17.07■□□□□ 0.32
HDAC6-217ENST00000469223 TNIP1Q15025 636 aa17.07■□□□□ 0.32
HDAC6-217ENST00000469223 TBC1D10BQ4KMP7 808 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-217ENST00000469223 C3orf67Q6ZVT6 689 aa17.07■□□□□ 0.32
HDAC6-217ENST00000469223 SAMD7Q7Z3H4 446 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms