RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 DIP2AQ14689 1571 aa11.81□□□□□ -0.52
NUP50-214ENST00000469163 XAGE3Q8WTP9 111 aa11.81□□□□□ -0.52
NUP50-214ENST00000469163 PDLIM2Q96JY6 352 aa11.81□□□□□ -0.52
NUP50-214ENST00000469163 API5Q9BZZ5 524 aaKnown RBP11.81□□□□□ -0.52
NUP50-214ENST00000469163 USP21Q9UK80 565 aa11.81□□□□□ -0.52
NUP50-214ENST00000469163 SLIT1O75093 1534 aa11.8□□□□□ -0.52
NUP50-214ENST00000469163 TTC36A6NLP5 189 aa11.8□□□□□ -0.52
NUP50-214ENST00000469163 KCNQ2O43526 872 aa11.8□□□□□ -0.52
NUP50-214ENST00000469163 SETQ01105 290 aaPredicted RBP11.8□□□□□ -0.52
NUP50-214ENST00000469163 AMOTQ4VCS5 1084 aa11.8□□□□□ -0.52
NUP50-214ENST00000469163 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
NUP50-214ENST00000469163 LRRFIP2Q9Y608 721 aaKnown RBP11.8□□□□□ -0.52
NUP50-214ENST00000469163 ZNF142P52746 1687 aaPredicted RBP11.8□□□□□ -0.52
NUP50-214ENST00000469163 NEXNQ0ZGT2 675 aa11.8□□□□□ -0.52
NUP50-214ENST00000469163 MRVI1Q9Y6F6 885 aa11.8□□□□□ -0.52
NUP50-214ENST00000469163 NBPF9Q3BBW0 867 aa11.79□□□□□ -0.52
NUP50-214ENST00000469163 CTNNA3Q9UI47 895 aa11.79□□□□□ -0.52
NUP50-214ENST00000469163 DDX41Q9UJV9 622 aaKnown RBP11.79□□□□□ -0.52
NUP50-214ENST00000469163 SRGAP3O43295 1099 aa11.79□□□□□ -0.52
NUP50-214ENST00000469163 ANKRD7Q92527 254 aa11.79□□□□□ -0.52
NUP50-214ENST00000469163 TBC1D32Q96NH3 1257 aa11.79□□□□□ -0.52
NUP50-214ENST00000469163 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
NUP50-214ENST00000469163 CT47B1P0C2W7 299 aaPredicted RBP11.78□□□□□ -0.52
NUP50-214ENST00000469163 MNS1Q8NEH6 495 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 TMEM132AQ24JP5 1023 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 ZNF790Q6PG37 636 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 NUTM1Q86Y26 1132 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
NUP50-214ENST00000469163 NEUROD6Q96NK8 337 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.78□□□□□ -0.52
NUP50-214ENST00000469163 IGSF1Q8N6C5 1336 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 ZNF521Q96K83 1311 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 MYO1CO00159 1063 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 HSP90AB1P08238 724 aaKnown RBP11.78□□□□□ -0.52
NUP50-214ENST00000469163 SYT10Q6XYQ8 523 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 UBE3BQ7Z3V4 1068 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 CCDC91Q7Z6B0 441 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 CWC22Q9HCG8 908 aaKnown RBP11.78□□□□□ -0.52
NUP50-214ENST00000469163 PA2G4Q9UQ80 394 aaKnown RBP11.78□□□□□ -0.52
NUP50-214ENST00000469163 INSRP06213 1382 aa11.78□□□□□ -0.52
NUP50-214ENST00000469163 BLMP54132 1417 aaPredicted RBP11.77□□□□□ -0.52
NUP50-214ENST00000469163 CHL1O00533 1208 aa11.77□□□□□ -0.52
NUP50-214ENST00000469163 CALRP27797 417 aaKnown RBP11.77□□□□□ -0.52
NUP50-214ENST00000469163 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.52
NUP50-214ENST00000469163 SRCIN1Q9C0H9 1055 aa11.77□□□□□ -0.52
NUP50-214ENST00000469163 EP400Q96L91 3159 aa11.77□□□□□ -0.52
NUP50-214ENST00000469163 PHKG2P15735 406 aa11.77□□□□□ -0.53
NUP50-214ENST00000469163 RPAINQ86UA6 219 aa11.77□□□□□ -0.53
NUP50-214ENST00000469163 ST7Q9NRC1 585 aa11.77□□□□□ -0.53
NUP50-214ENST00000469163 RBM28Q9NW13 759 aaKnown RBP11.77□□□□□ -0.53
NUP50-214ENST00000469163 KIF1CO43896 1103 aaKnown RBP11.77□□□□□ -0.53
NUP50-214ENST00000469163 NBPF5PQ86XG9 351 aaPredicted RBP11.77□□□□□ -0.53
NUP50-214ENST00000469163 PIK3R4Q99570 1358 aa11.77□□□□□ -0.53
NUP50-214ENST00000469163 ATP6V1AP38606 617 aa11.76□□□□□ -0.53
NUP50-214ENST00000469163 ZNF219Q9P2Y4 722 aaPredicted RBP11.76□□□□□ -0.53
NUP50-214ENST00000469163 MED14O60244 1454 aa11.76□□□□□ -0.53
NUP50-214ENST00000469163 PIBF1Q8WXW3 757 aa11.76□□□□□ -0.53
NUP50-214ENST00000469163 PDE3AQ14432 1141 aa11.76□□□□□ -0.53
NUP50-214ENST00000469163 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
NUP50-214ENST00000469163 OTUD7AQ8TE49 926 aaPredicted RBP11.75□□□□□ -0.53
NUP50-214ENST00000469163 TTC12Q9H892 705 aaPredicted RBP11.75□□□□□ -0.53
NUP50-214ENST00000469163 PTCH1Q13635 1447 aa11.75□□□□□ -0.53
NUP50-214ENST00000469163 MYOM1P52179 1685 aa11.75□□□□□ -0.53
NUP50-214ENST00000469163 H0YHG0 523 aa11.75□□□□□ -0.53
NUP50-214ENST00000469163 DTNBO60941 627 aa11.75□□□□□ -0.53
NUP50-214ENST00000469163 SARNPP82979 210 aaKnown RBP11.75□□□□□ -0.53
NUP50-214ENST00000469163 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
NUP50-214ENST00000469163 ZSCAN23Q3MJ62 389 aa11.75□□□□□ -0.53
NUP50-214ENST00000469163 GORABQ5T7V8 394 aa11.75□□□□□ -0.53
NUP50-214ENST00000469163 NEK11Q8NG66 645 aa11.75□□□□□ -0.53
NUP50-214ENST00000469163 FMNL2Q96PY5 1086 aa11.75□□□□□ -0.53
NUP50-214ENST00000469163 MORC2Q9Y6X9 1032 aaPredicted RBP11.74□□□□□ -0.53
NUP50-214ENST00000469163 DDX58O95786 925 aaKnown RBP11.74□□□□□ -0.53
NUP50-214ENST00000469163 KRBA2Q6ZNG9 492 aa11.74□□□□□ -0.53
NUP50-214ENST00000469163 PTF1AQ7RTS3 328 aa11.74□□□□□ -0.53
NUP50-214ENST00000469163 NDUFB9Q9Y6M9 179 aa11.74□□□□□ -0.53
NUP50-214ENST00000469163 RGPD8O14715 1765 aaPredicted RBP11.74□□□□□ -0.53
NUP50-214ENST00000469163 A0A087WZG4 1122 aa11.74□□□□□ -0.53
NUP50-214ENST00000469163 TTLL7Q6ZT98 887 aa11.74□□□□□ -0.53
NUP50-214ENST00000469163 STK11IPQ8N1F8 1099 aa11.74□□□□□ -0.53
NUP50-214ENST00000469163 OTUD6BQ8N6M0 293 aa11.74□□□□□ -0.53
NUP50-214ENST00000469163 EIF4A1P60842 406 aaKnown RBP11.73□□□□□ -0.53
NUP50-214ENST00000469163 NCBP1Q09161 790 aaKnown RBP11.73□□□□□ -0.53
NUP50-214ENST00000469163 CCDC27Q2M243 656 aa11.73□□□□□ -0.53
NUP50-214ENST00000469163 TTC31Q49AM3 519 aaPredicted RBP11.73□□□□□ -0.53
NUP50-214ENST00000469163 KIF18AQ8NI77 898 aa11.73□□□□□ -0.53
NUP50-214ENST00000469163 SLC52A2Q9HAB3 445 aa11.73□□□□□ -0.53
NUP50-214ENST00000469163 CDC42BPGQ6DT37 1551 aa11.73□□□□□ -0.53
NUP50-214ENST00000469163 TECPR2O15040 1411 aa11.73□□□□□ -0.53
NUP50-214ENST00000469163 MAP2K2P36507 400 aa11.73□□□□□ -0.53
NUP50-214ENST00000469163 CCDC191Q8NCU4 936 aa11.73□□□□□ -0.53
NUP50-214ENST00000469163 DNAAF4Q8WXU2 420 aa11.73□□□□□ -0.53
NUP50-214ENST00000469163 MED4Q9NPJ6 270 aa11.73□□□□□ -0.53
NUP50-214ENST00000469163 DBF4Q9UBU7 674 aaPredicted RBP11.73□□□□□ -0.53
NUP50-214ENST00000469163 NBPF10Q6P3W6 841 aaKnown RBP11.73□□□□□ -0.53
NUP50-214ENST00000469163 FAM89AQ96GI7 184 aa11.73□□□□□ -0.53
NUP50-214ENST00000469163 CYP2C19P33261 490 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 PRPF38AQ8NAV1 312 aaKnown RBP11.72□□□□□ -0.53
NUP50-214ENST00000469163 ANKRD20A12PQ8NF67 263 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms