RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 AFF2P51816 1311 aa17.08■□□□□ 0.32
SMARCD3-205ENST00000469154 ADCY9O60503 1353 aa17.07■□□□□ 0.32
SMARCD3-205ENST00000469154 PI4KAP2A4QPH2 592 aa17.07■□□□□ 0.32
SMARCD3-205ENST00000469154 MTX1Q13505 466 aa17.07■□□□□ 0.32
SMARCD3-205ENST00000469154 PI4KAP1Q8N8J0 262 aa17.07■□□□□ 0.32
SMARCD3-205ENST00000469154 ZKSCAN5Q9Y2L8 839 aa17.07■□□□□ 0.32
SMARCD3-205ENST00000469154 THRAP3Q9Y2W1 955 aaKnown RBP17.07■□□□□ 0.32
SMARCD3-205ENST00000469154 RUFY2Q8WXA3 655 aa17.07■□□□□ 0.32
SMARCD3-205ENST00000469154 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.07■□□□□ 0.32
SMARCD3-205ENST00000469154 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
SMARCD3-205ENST00000469154 OS9Q13438 667 aaPredicted RBP17.06■□□□□ 0.32
SMARCD3-205ENST00000469154 HSP90AA2PQ14568 343 aaPredicted RBP17.06■□□□□ 0.32
SMARCD3-205ENST00000469154 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
SMARCD3-205ENST00000469154 FBXO41Q8TF61 875 aa17.06■□□□□ 0.32
SMARCD3-205ENST00000469154 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
SMARCD3-205ENST00000469154 LIMCH1Q9UPQ0 1083 aa17.06■□□□□ 0.32
SMARCD3-205ENST00000469154 HDAC5Q9UQL6 1122 aa17.06■□□□□ 0.32
SMARCD3-205ENST00000469154 ALDH1L1O75891 902 aa17.06■□□□□ 0.32
SMARCD3-205ENST00000469154 EXOC5O00471 708 aa17.05■□□□□ 0.32
SMARCD3-205ENST00000469154 AK2P54819 239 aa17.05■□□□□ 0.32
SMARCD3-205ENST00000469154 FAM98CQ17RN3 349 aaKnown RBP17.05■□□□□ 0.32
SMARCD3-205ENST00000469154 GPATCH3Q96I76 525 aa17.05■□□□□ 0.32
SMARCD3-205ENST00000469154 DIAPH3Q9NSV4 1193 aa17.05■□□□□ 0.32
SMARCD3-205ENST00000469154 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.05■□□□□ 0.32
SMARCD3-205ENST00000469154 SIPA1L3O60292 1781 aaPredicted RBP17.05■□□□□ 0.32
SMARCD3-205ENST00000469154 BTBD11A6QL63 1104 aa17.05■□□□□ 0.32
SMARCD3-205ENST00000469154 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
SMARCD3-205ENST00000469154 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
SMARCD3-205ENST00000469154 GADD45BO75293 160 aaPredicted RBP17.04■□□□□ 0.32
SMARCD3-205ENST00000469154 CWC27Q6UX04 472 aaKnown RBP17.04■□□□□ 0.32
SMARCD3-205ENST00000469154 CLASRPQ8N2M8 674 aaKnown RBP17.04■□□□□ 0.32
SMARCD3-205ENST00000469154 FAM184AQ8NB25 1140 aa17.04■□□□□ 0.32
SMARCD3-205ENST00000469154 CDCA7Q9BWT1 371 aaPredicted RBP17.04■□□□□ 0.32
SMARCD3-205ENST00000469154 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
SMARCD3-205ENST00000469154 CSPP1Q1MSJ5 1256 aa17.04■□□□□ 0.32
SMARCD3-205ENST00000469154 BARGINQ6ZT62 677 aa17.04■□□□□ 0.32
SMARCD3-205ENST00000469154 CCDC183Q5T5S1 534 aa17.03■□□□□ 0.32
SMARCD3-205ENST00000469154 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
SMARCD3-205ENST00000469154 RASEFQ8IZ41 740 aa17.03■□□□□ 0.32
SMARCD3-205ENST00000469154 NFATC2IPQ8NCF5 419 aa17.03■□□□□ 0.32
SMARCD3-205ENST00000469154 RNF214Q8ND24 703 aa17.03■□□□□ 0.32
SMARCD3-205ENST00000469154 SMC3Q9UQE7 1217 aa17.03■□□□□ 0.32
SMARCD3-205ENST00000469154 ATP6V1DQ9Y5K8 247 aa17.03■□□□□ 0.32
SMARCD3-205ENST00000469154 KCNQ3O43525 872 aa17.02■□□□□ 0.32
SMARCD3-205ENST00000469154 LETM1O95202 739 aaPredicted RBP17.02■□□□□ 0.32
SMARCD3-205ENST00000469154 DDB1Q16531 1140 aa17.02■□□□□ 0.32
SMARCD3-205ENST00000469154 UVSSAQ2YD98 709 aa17.02■□□□□ 0.32
SMARCD3-205ENST00000469154 SLC52A2Q9HAB3 445 aa17.02■□□□□ 0.32
SMARCD3-205ENST00000469154 GDPD2Q9HCC8 539 aa17.02■□□□□ 0.32
SMARCD3-205ENST00000469154 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.32
SMARCD3-205ENST00000469154 STX6O43752 255 aa17.02■□□□□ 0.32
SMARCD3-205ENST00000469154 KLHL34Q8N239 644 aa17.02■□□□□ 0.32
SMARCD3-205ENST00000469154 A0A0G2JS52 829 aa17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 GLIPR1L2Q4G1C9 344 aa17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 TM6SF1Q9BZW5 370 aa17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 F13A1P00488 732 aa17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 CASTP20810 708 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 NKX1-1Q15270 411 aaPredicted RBP17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 KCNB2Q92953 911 aa17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
SMARCD3-205ENST00000469154 SYT1P21579 422 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 CABP4P57796 275 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 UBE2HP62256 183 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 VPS53Q5VIR6 699 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 CNPY2Q9Y2B0 182 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 ANXA1P04083 346 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 IFIT2P09913 472 aaKnown RBP17■□□□□ 0.31
SMARCD3-205ENST00000469154 KSR2Q6VAB6 950 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 GJD4Q96KN9 370 aaPredicted RBP17■□□□□ 0.31
SMARCD3-205ENST00000469154 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
SMARCD3-205ENST00000469154 MAP3K2Q9Y2U5 619 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 TNS2Q63HR2 1409 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
SMARCD3-205ENST00000469154 EVI5LQ96CN4 794 aa16.99■□□□□ 0.31
SMARCD3-205ENST00000469154 HYPKQ9NX55 129 aa16.99■□□□□ 0.31
SMARCD3-205ENST00000469154 TRPC5Q9UL62 973 aaPredicted RBP16.99■□□□□ 0.31
SMARCD3-205ENST00000469154 HEG1Q9ULI3 1381 aa16.99■□□□□ 0.31
SMARCD3-205ENST00000469154 HIP1O00291 1037 aa16.99■□□□□ 0.31
SMARCD3-205ENST00000469154 PTMAP06454 111 aaKnown RBP16.99■□□□□ 0.31
SMARCD3-205ENST00000469154 SLC39A6Q13433 755 aa16.99■□□□□ 0.31
SMARCD3-205ENST00000469154 PDRG1Q9NUG6 133 aa16.99■□□□□ 0.31
SMARCD3-205ENST00000469154 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.99■□□□□ 0.31
SMARCD3-205ENST00000469154 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
SMARCD3-205ENST00000469154 JAKMIP1Q96N16 626 aaKnown RBP16.98■□□□□ 0.31
SMARCD3-205ENST00000469154 QTRT2Q9H974 415 aaKnown RBP16.98■□□□□ 0.31
SMARCD3-205ENST00000469154 CYP46A1Q9Y6A2 500 aa16.98■□□□□ 0.31
SMARCD3-205ENST00000469154 ZSWIM6Q9HCJ5 1215 aa16.98■□□□□ 0.31
SMARCD3-205ENST00000469154 ERVV-2B6SEH9 535 aa16.97■□□□□ 0.31
SMARCD3-205ENST00000469154 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
SMARCD3-205ENST00000469154 PTH1RQ03431 593 aa16.97■□□□□ 0.31
SMARCD3-205ENST00000469154 PRPF40BQ6NWY9 871 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-205ENST00000469154 R3HCC1Q9Y3T6 440 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-205ENST00000469154 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
SMARCD3-205ENST00000469154 LARGE1O95461 756 aa16.96■□□□□ 0.31
SMARCD3-205ENST00000469154 GJB2P29033 226 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms