RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 NLRP3Q96P20 1036 aa16.73■□□□□ 0.27
CLRN1-204ENST00000468836 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
CLRN1-204ENST00000468836 COL11A2P13942 1736 aaPredicted RBP16.73■□□□□ 0.27
CLRN1-204ENST00000468836 KLRG2A4D1S0 409 aaPredicted RBP16.72■□□□□ 0.27
CLRN1-204ENST00000468836 CCDC93Q567U6 631 aa16.72■□□□□ 0.27
CLRN1-204ENST00000468836 NLRP10Q86W26 655 aa16.72■□□□□ 0.27
CLRN1-204ENST00000468836 RBM17Q96I25 401 aaKnown RBP16.72■□□□□ 0.27
CLRN1-204ENST00000468836 TMX4Q9H1E5 349 aaPredicted RBP16.72■□□□□ 0.27
CLRN1-204ENST00000468836 TAOK3Q9H2K8 898 aa16.72■□□□□ 0.27
CLRN1-204ENST00000468836 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
CLRN1-204ENST00000468836 FANCIQ9NVI1 1328 aa16.71■□□□□ 0.27
CLRN1-204ENST00000468836 RIC1Q4ADV7 1423 aa16.71■□□□□ 0.27
CLRN1-204ENST00000468836 TSPYL6Q8N831 410 aa16.71■□□□□ 0.27
CLRN1-204ENST00000468836 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
CLRN1-204ENST00000468836 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
CLRN1-204ENST00000468836 NFKBIEO00221 500 aa16.7■□□□□ 0.26
CLRN1-204ENST00000468836 CRY2Q49AN0 593 aa16.7■□□□□ 0.26
CLRN1-204ENST00000468836 PHAXQ9H814 394 aaKnown RBP16.7■□□□□ 0.26
CLRN1-204ENST00000468836 NUP98P52948 1817 aa16.7■□□□□ 0.26
CLRN1-204ENST00000468836 ATP5J2-PTCD1G3V325 749 aa16.69■□□□□ 0.26
CLRN1-204ENST00000468836 ZC3H4Q9UPT8 1303 aaKnown RBP16.69■□□□□ 0.26
CLRN1-204ENST00000468836 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
CLRN1-204ENST00000468836 C1QTNF8P60827 252 aa16.68■□□□□ 0.26
CLRN1-204ENST00000468836 RTKN2Q8IZC4 609 aa16.68■□□□□ 0.26
CLRN1-204ENST00000468836 ZNF428Q96B54 188 aa16.68■□□□□ 0.26
CLRN1-204ENST00000468836 MYD88Q99836 296 aa16.68■□□□□ 0.26
CLRN1-204ENST00000468836 TNRC6CQ9HCJ0 1690 aaKnown RBP16.67■□□□□ 0.26
CLRN1-204ENST00000468836 HCLS1P14317 486 aaPredicted RBP16.67■□□□□ 0.26
CLRN1-204ENST00000468836 C16orf71Q8IYS4 520 aaPredicted RBP16.67■□□□□ 0.26
CLRN1-204ENST00000468836 LTBP3Q9NS15 1303 aa16.67■□□□□ 0.26
CLRN1-204ENST00000468836 CCER2I3L3R5 266 aa16.66■□□□□ 0.26
CLRN1-204ENST00000468836 PPEF1O14829 653 aaPredicted RBP16.66■□□□□ 0.26
CLRN1-204ENST00000468836 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
CLRN1-204ENST00000468836 HSP90B1P14625 803 aaKnown RBP16.66■□□□□ 0.26
CLRN1-204ENST00000468836 NEXNQ0ZGT2 675 aa16.66■□□□□ 0.26
CLRN1-204ENST00000468836 SLC10A5Q5PT55 438 aa16.66■□□□□ 0.26
CLRN1-204ENST00000468836 IFFO2Q5TF58 517 aa16.66■□□□□ 0.26
CLRN1-204ENST00000468836 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
CLRN1-204ENST00000468836 DDX46Q7L014 1031 aaKnown RBP16.66■□□□□ 0.26
CLRN1-204ENST00000468836 CRAMP1Q96RY5 1269 aa16.66■□□□□ 0.26
CLRN1-204ENST00000468836 ISCA1Q9BUE6 129 aa16.66■□□□□ 0.26
CLRN1-204ENST00000468836 HOXA10P31260 410 aaPredicted RBP16.65■□□□□ 0.26
CLRN1-204ENST00000468836 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLRN1-204ENST00000468836 EXOSC9Q06265 439 aaKnown RBP16.65■□□□□ 0.26
CLRN1-204ENST00000468836 RTL5Q5HYW3 569 aaPredicted RBP16.65■□□□□ 0.26
CLRN1-204ENST00000468836 DPY19L2Q6NUT2 758 aa16.65■□□□□ 0.26
CLRN1-204ENST00000468836 FAM89AQ96GI7 184 aa16.65■□□□□ 0.26
CLRN1-204ENST00000468836 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
CLRN1-204ENST00000468836 C3orf67Q6ZVT6 689 aa16.64■□□□□ 0.25
CLRN1-204ENST00000468836 C7orf43Q8WVR3 580 aa16.64■□□□□ 0.25
CLRN1-204ENST00000468836 CWC25Q9NXE8 425 aaPredicted RBP16.64■□□□□ 0.25
CLRN1-204ENST00000468836 MAP3K2Q9Y2U5 619 aa16.64■□□□□ 0.25
CLRN1-204ENST00000468836 PI4KAP2A4QPH2 592 aa16.63■□□□□ 0.25
CLRN1-204ENST00000468836 TRIM28Q13263 835 aaKnown RBP16.63■□□□□ 0.25
CLRN1-204ENST00000468836 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
CLRN1-204ENST00000468836 KSR2Q6VAB6 950 aa16.63■□□□□ 0.25
CLRN1-204ENST00000468836 PI4KAP1Q8N8J0 262 aa16.63■□□□□ 0.25
CLRN1-204ENST00000468836 CCDC191Q8NCU4 936 aa16.63■□□□□ 0.25
CLRN1-204ENST00000468836 METTL22Q9BUU2 404 aaPredicted RBP16.63■□□□□ 0.25
CLRN1-204ENST00000468836 NMRK2Q9NPI5 230 aa16.63■□□□□ 0.25
CLRN1-204ENST00000468836 ARFGEF2Q9Y6D5 1785 aa16.62■□□□□ 0.25
CLRN1-204ENST00000468836 SLX4Q8IY92 1834 aa16.62■□□□□ 0.25
CLRN1-204ENST00000468836 IRS4O14654 1257 aaPredicted RBP16.62■□□□□ 0.25
CLRN1-204ENST00000468836 PRELPP51888 382 aa16.62■□□□□ 0.25
CLRN1-204ENST00000468836 FKBP5Q13451 457 aaPredicted RBP16.62■□□□□ 0.25
CLRN1-204ENST00000468836 OLFM4Q6UX06 510 aa16.62■□□□□ 0.25
CLRN1-204ENST00000468836 SYNE4Q8N205 404 aa16.62■□□□□ 0.25
CLRN1-204ENST00000468836 ZBTB38Q8NAP3 1195 aaPredicted RBP16.62■□□□□ 0.25
CLRN1-204ENST00000468836 ZNF277Q9NRM2 450 aaPredicted RBP16.62■□□□□ 0.25
CLRN1-204ENST00000468836 ABCC4O15439 1325 aa16.62■□□□□ 0.25
CLRN1-204ENST00000468836 CACNA1SQ13698 1873 aa16.61■□□□□ 0.25
CLRN1-204ENST00000468836 GLTPD2A6NH11 291 aa16.61■□□□□ 0.25
CLRN1-204ENST00000468836 KIF3CO14782 793 aa16.61■□□□□ 0.25
CLRN1-204ENST00000468836 FLIIQ13045 1269 aa16.61■□□□□ 0.25
CLRN1-204ENST00000468836 DIEXFQ68CQ4 756 aaKnown RBP16.61■□□□□ 0.25
CLRN1-204ENST00000468836 CEP350Q5VT06 3117 aa16.61■□□□□ 0.25
CLRN1-204ENST00000468836 E9PSI1 815 aa16.6■□□□□ 0.25
CLRN1-204ENST00000468836 VAMP4O75379 141 aa16.6■□□□□ 0.25
CLRN1-204ENST00000468836 GRAPQ13588 217 aa16.6■□□□□ 0.25
CLRN1-204ENST00000468836 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
CLRN1-204ENST00000468836 JDP2Q8WYK2 163 aa16.6■□□□□ 0.25
CLRN1-204ENST00000468836 PSMD1Q99460 953 aa16.6■□□□□ 0.25
CLRN1-204ENST00000468836 RRAGCQ9HB90 399 aa16.6■□□□□ 0.25
CLRN1-204ENST00000468836 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
CLRN1-204ENST00000468836 BBOX1O75936 387 aa16.59■□□□□ 0.25
CLRN1-204ENST00000468836 TOMM70O94826 608 aa16.59■□□□□ 0.25
CLRN1-204ENST00000468836 PCCAP05165 728 aaPredicted RBP16.59■□□□□ 0.25
CLRN1-204ENST00000468836 IARSP41252 1262 aaKnown RBP16.59■□□□□ 0.25
CLRN1-204ENST00000468836 G2E3Q7L622 706 aa16.59■□□□□ 0.25
CLRN1-204ENST00000468836 TIAM2Q8IVF5 1701 aa16.59■□□□□ 0.25
CLRN1-204ENST00000468836 DPP8Q6V1X1 898 aaPredicted RBP16.58■□□□□ 0.24
CLRN1-204ENST00000468836 TMC4Q7Z404 712 aa16.58■□□□□ 0.24
CLRN1-204ENST00000468836 SUPT20HQ8NEM7 779 aa16.58■□□□□ 0.24
CLRN1-204ENST00000468836 ATP6V0A2Q9Y487 856 aa16.58■□□□□ 0.24
CLRN1-204ENST00000468836 ZNF521Q96K83 1311 aa16.57■□□□□ 0.24
CLRN1-204ENST00000468836 PDE8AO60658 829 aa16.57■□□□□ 0.24
CLRN1-204ENST00000468836 VEGFAP15692 232 aaPredicted RBP16.57■□□□□ 0.24
CLRN1-204ENST00000468836 SF3B3Q15393 1217 aaKnown RBP16.57■□□□□ 0.24
CLRN1-204ENST00000468836 CCDC152Q4G0S7 254 aa16.57■□□□□ 0.24
CLRN1-204ENST00000468836 LARGE2Q8N3Y3 721 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms