RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 LAMB4A4D0S4 1761 aa20.6■□□□□ 0.89
SRRM1-207ENST00000468822 HTATSF1O43719 755 aaKnown RBP20.6■□□□□ 0.89
SRRM1-207ENST00000468822 GTF2E1P29083 439 aaPredicted RBP20.6■□□□□ 0.89
SRRM1-207ENST00000468822 GJA3Q9Y6H8 435 aa20.6■□□□□ 0.89
SRRM1-207ENST00000468822 WDR33Q9C0J8 1336 aaKnown RBP20.59■□□□□ 0.89
SRRM1-207ENST00000468822 SCNN1DP51172 638 aa20.59■□□□□ 0.89
SRRM1-207ENST00000468822 C3orf67Q6ZVT6 689 aa20.59■□□□□ 0.89
SRRM1-207ENST00000468822 DDX21Q9NR30 783 aaKnown RBP eCLIP20.59■□□□□ 0.89
SRRM1-207ENST00000468822 GPTP24298 496 aa20.58■□□□□ 0.89
SRRM1-207ENST00000468822 HOXA10P31260 410 aaPredicted RBP20.58■□□□□ 0.89
SRRM1-207ENST00000468822 EPS15P42566 896 aa20.58■□□□□ 0.89
SRRM1-207ENST00000468822 JDP2Q8WYK2 163 aa20.58■□□□□ 0.89
SRRM1-207ENST00000468822 ABT1Q9ULW3 272 aaKnown RBP20.58■□□□□ 0.89
SRRM1-207ENST00000468822 NUP98P52948 1817 aa20.57■□□□□ 0.88
SRRM1-207ENST00000468822 MAP3K15Q6ZN16 1313 aa20.57■□□□□ 0.88
SRRM1-207ENST00000468822 ERVV-1B6SEH8 477 aa20.57■□□□□ 0.88
SRRM1-207ENST00000468822 SUSD4Q5VX71 490 aa20.56■□□□□ 0.88
SRRM1-207ENST00000468822 NYXQ9GZU5 481 aa20.56■□□□□ 0.88
SRRM1-207ENST00000468822 RRP7AQ9Y3A4 280 aaKnown RBP20.56■□□□□ 0.88
SRRM1-207ENST00000468822 KDM3BQ7LBC6 1761 aa20.56■□□□□ 0.88
SRRM1-207ENST00000468822 RIC1Q4ADV7 1423 aa20.55■□□□□ 0.88
SRRM1-207ENST00000468822 TRAF5O00463 557 aa20.55■□□□□ 0.88
SRRM1-207ENST00000468822 TCERG1O14776 1098 aaKnown RBP20.55■□□□□ 0.88
SRRM1-207ENST00000468822 EIF6P56537 245 aaKnown RBP20.55■□□□□ 0.88
SRRM1-207ENST00000468822 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
SRRM1-207ENST00000468822 CC2D2BQ6DHV5 1058 aa20.55■□□□□ 0.88
SRRM1-207ENST00000468822 THUMPD2Q9BTF0 503 aaKnown RBP20.55■□□□□ 0.88
SRRM1-207ENST00000468822 ZBTB3Q9H5J0 574 aa20.55■□□□□ 0.88
SRRM1-207ENST00000468822 MYL6BP14649 208 aa20.54■□□□□ 0.88
SRRM1-207ENST00000468822 CST9Q5W186 159 aa20.54■□□□□ 0.88
SRRM1-207ENST00000468822 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
SRRM1-207ENST00000468822 RPGRQ92834 1020 aaKnown RBP20.54■□□□□ 0.88
SRRM1-207ENST00000468822 ABHD8Q96I13 439 aa20.54■□□□□ 0.88
SRRM1-207ENST00000468822 THSD7BQ9C0I4 1608 aa20.53■□□□□ 0.88
SRRM1-207ENST00000468822 NTSR2O95665 410 aa20.53■□□□□ 0.88
SRRM1-207ENST00000468822 ZNF34Q8IZ26 560 aa20.53■□□□□ 0.88
SRRM1-207ENST00000468822 IBTKQ9P2D0 1353 aaPredicted RBP20.53■□□□□ 0.88
SRRM1-207ENST00000468822 DLG5Q8TDM6 1919 aa20.53■□□□□ 0.88
SRRM1-207ENST00000468822 PPEF1O14829 653 aaPredicted RBP20.52■□□□□ 0.88
SRRM1-207ENST00000468822 LMOD1P29536 600 aaPredicted RBP20.52■□□□□ 0.88
SRRM1-207ENST00000468822 MAP2K1Q02750 393 aaPredicted RBP20.52■□□□□ 0.88
SRRM1-207ENST00000468822 CYP4F22Q6NT55 531 aa20.52■□□□□ 0.88
SRRM1-207ENST00000468822 KIF6Q6ZMV9 814 aa20.52■□□□□ 0.88
SRRM1-207ENST00000468822 CAPNS2Q96L46 248 aa20.52■□□□□ 0.88
SRRM1-207ENST00000468822 CRAMP1Q96RY5 1269 aa20.52■□□□□ 0.88
SRRM1-207ENST00000468822 GRM1Q13255 1194 aa20.5■□□□□ 0.87
SRRM1-207ENST00000468822 LRP10Q7Z4F1 713 aa20.5■□□□□ 0.87
SRRM1-207ENST00000468822 RBM17Q96I25 401 aaKnown RBP20.5■□□□□ 0.87
SRRM1-207ENST00000468822 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
SRRM1-207ENST00000468822 AOC3Q16853 763 aa20.49■□□□□ 0.87
SRRM1-207ENST00000468822 USP50Q70EL3 339 aaPredicted RBP20.49■□□□□ 0.87
SRRM1-207ENST00000468822 GPR101Q96P66 508 aaPredicted RBP20.49■□□□□ 0.87
SRRM1-207ENST00000468822 PPIP5K2O43314 1243 aa20.48■□□□□ 0.87
SRRM1-207ENST00000468822 AOC2O75106 756 aa20.48■□□□□ 0.87
SRRM1-207ENST00000468822 GIGYF2Q6Y7W6 1299 aaKnown RBP20.48■□□□□ 0.87
SRRM1-207ENST00000468822 PAXIP1Q6ZW49 1069 aaPredicted RBP20.48■□□□□ 0.87
SRRM1-207ENST00000468822 NIM1KQ8IY84 436 aa20.48■□□□□ 0.87
SRRM1-207ENST00000468822 PNISRQ8TF01 805 aaKnown RBP20.48■□□□□ 0.87
SRRM1-207ENST00000468822 TSKSQ9UJT2 592 aa20.48■□□□□ 0.87
SRRM1-207ENST00000468822 TLL2Q9Y6L7 1015 aa20.48■□□□□ 0.87
SRRM1-207ENST00000468822 CXCL9Q07325 125 aa20.47■□□□□ 0.87
SRRM1-207ENST00000468822 PDIA6Q15084 440 aa20.47■□□□□ 0.87
SRRM1-207ENST00000468822 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
SRRM1-207ENST00000468822 GRIPAP1Q4V328 841 aa20.47■□□□□ 0.87
SRRM1-207ENST00000468822 GPRC5DQ9NZD1 345 aa20.47■□□□□ 0.87
SRRM1-207ENST00000468822 ATP6V0A2Q9Y487 856 aa20.47■□□□□ 0.87
SRRM1-207ENST00000468822 TRPM7Q96QT4 1865 aa20.46■□□□□ 0.87
SRRM1-207ENST00000468822 NFE2L2Q16236 605 aa20.46■□□□□ 0.87
SRRM1-207ENST00000468822 PROSER3Q2NL68 480 aa20.46■□□□□ 0.87
SRRM1-207ENST00000468822 ABCC4O15439 1325 aa20.46■□□□□ 0.87
SRRM1-207ENST00000468822 ADARB2Q9NS39 739 aaKnown RBP20.45■□□□□ 0.86
SRRM1-207ENST00000468822 ANXA1P04083 346 aa20.44■□□□□ 0.86
SRRM1-207ENST00000468822 ECE1P42892 770 aa20.44■□□□□ 0.86
SRRM1-207ENST00000468822 GMPSP49915 693 aaPredicted RBP20.44■□□□□ 0.86
SRRM1-207ENST00000468822 SLC10A5Q5PT55 438 aa20.44■□□□□ 0.86
SRRM1-207ENST00000468822 RTFDC1Q9BY42 306 aaPredicted RBP20.44■□□□□ 0.86
SRRM1-207ENST00000468822 GLIS2Q9BZE0 524 aaPredicted RBP20.44■□□□□ 0.86
SRRM1-207ENST00000468822 HIRAP54198 1017 aaPredicted RBP20.43■□□□□ 0.86
SRRM1-207ENST00000468822 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
SRRM1-207ENST00000468822 PPP1R42Q7Z4L9 355 aa20.43■□□□□ 0.86
SRRM1-207ENST00000468822 SAPCD2Q86UD0 394 aa20.43■□□□□ 0.86
SRRM1-207ENST00000468822 NLRP3Q96P20 1036 aa20.43■□□□□ 0.86
SRRM1-207ENST00000468822 ZNRF3Q9ULT6 936 aa20.43■□□□□ 0.86
SRRM1-207ENST00000468822 SHTN1A0MZ66 631 aa20.42■□□□□ 0.86
SRRM1-207ENST00000468822 PARP10Q53GL7 1025 aa20.42■□□□□ 0.86
SRRM1-207ENST00000468822 UTP14AQ9BVJ6 771 aaKnown RBP20.42■□□□□ 0.86
SRRM1-207ENST00000468822 ERBB4Q15303 1308 aa20.42■□□□□ 0.86
SRRM1-207ENST00000468822 CELF2O95319 508 aaKnown RBP20.41■□□□□ 0.86
SRRM1-207ENST00000468822 PGAP2Q9UHJ9 254 aa20.41■□□□□ 0.86
SRRM1-207ENST00000468822 CCDC85CA6NKD9 419 aa20.4■□□□□ 0.86
SRRM1-207ENST00000468822 TNRC18O15417 2968 aaPredicted RBP20.4■□□□□ 0.86
SRRM1-207ENST00000468822 RAD17O75943 681 aa20.4■□□□□ 0.86
SRRM1-207ENST00000468822 HCLS1P14317 486 aaPredicted RBP20.4■□□□□ 0.86
SRRM1-207ENST00000468822 EIF2S2P20042 333 aaKnown RBP20.4■□□□□ 0.86
SRRM1-207ENST00000468822 LAMB2P55268 1798 aa20.4■□□□□ 0.86
SRRM1-207ENST00000468822 DLK2Q6UY11 383 aa20.4■□□□□ 0.86
SRRM1-207ENST00000468822 TRPM4Q8TD43 1214 aa20.4■□□□□ 0.86
SRRM1-207ENST00000468822 BEGAINQ9BUH8 593 aa20.4■□□□□ 0.86
SRRM1-207ENST00000468822 VPS33BQ9H267 617 aa20.4■□□□□ 0.86
SRRM1-207ENST00000468822 SLC34A2O95436 690 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms