RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 ZBTB38Q8NAP3 1195 aaPredicted RBP14.25□□□□□ -0.13
MSH5-214ENST00000468602 SETDB2Q96T68 719 aa14.25□□□□□ -0.13
MSH5-214ENST00000468602 MYD88Q99836 296 aa14.25□□□□□ -0.13
MSH5-214ENST00000468602 NYXQ9GZU5 481 aa14.25□□□□□ -0.13
MSH5-214ENST00000468602 USP44Q9H0E7 712 aa14.25□□□□□ -0.13
MSH5-214ENST00000468602 CWC25Q9NXE8 425 aaPredicted RBP14.25□□□□□ -0.13
MSH5-214ENST00000468602 DDX19BQ9UMR2 479 aa14.25□□□□□ -0.13
MSH5-214ENST00000468602 NIP7Q9Y221 180 aaKnown RBP eCLIP14.25□□□□□ -0.13
MSH5-214ENST00000468602 ZBTB7BO15156 539 aaPredicted RBP14.24□□□□□ -0.13
MSH5-214ENST00000468602 HSP90B1P14625 803 aaKnown RBP14.24□□□□□ -0.13
MSH5-214ENST00000468602 FTSJ3Q8IY81 847 aaKnown RBP14.24□□□□□ -0.13
MSH5-214ENST00000468602 TMEM57Q8N5G2 664 aa14.24□□□□□ -0.13
MSH5-214ENST00000468602 HDAC5Q9UQL6 1122 aa14.24□□□□□ -0.13
MSH5-214ENST00000468602 AFDNP55196 1824 aaKnown RBP14.24□□□□□ -0.13
MSH5-214ENST00000468602 KIF13BQ9NQT8 1826 aa14.23□□□□□ -0.13
MSH5-214ENST00000468602 KLRG2A4D1S0 409 aaPredicted RBP14.23□□□□□ -0.13
MSH5-214ENST00000468602 PSDA5PKW4 1024 aaPredicted RBP14.23□□□□□ -0.13
MSH5-214ENST00000468602 GRM8O00222 908 aa14.23□□□□□ -0.13
MSH5-214ENST00000468602 PLIN1O60240 522 aa14.23□□□□□ -0.13
MSH5-214ENST00000468602 DDR1Q08345 913 aa14.23□□□□□ -0.13
MSH5-214ENST00000468602 TPTE2Q6XPS3 522 aa14.23□□□□□ -0.13
MSH5-214ENST00000468602 PDGFDQ9GZP0 370 aaPredicted RBP14.23□□□□□ -0.13
MSH5-214ENST00000468602 TNNQ9UQP3 1299 aa14.23□□□□□ -0.13
MSH5-214ENST00000468602 LAMB2P55268 1798 aa14.23□□□□□ -0.13
MSH5-214ENST00000468602 GNAI3P08754 354 aa14.22□□□□□ -0.13
MSH5-214ENST00000468602 CWF19L2Q2TBE0 894 aaKnown RBP14.22□□□□□ -0.13
MSH5-214ENST00000468602 C20orf194Q5TEA3 1177 aa14.22□□□□□ -0.13
MSH5-214ENST00000468602 SUSD4Q5VX71 490 aa14.22□□□□□ -0.13
MSH5-214ENST00000468602 UTP14AQ9BVJ6 771 aaKnown RBP14.22□□□□□ -0.13
MSH5-214ENST00000468602 SH3TC1Q8TE82 1336 aa14.21□□□□□ -0.13
MSH5-214ENST00000468602 ATP5J2-PTCD1G3V325 749 aa14.21□□□□□ -0.13
MSH5-214ENST00000468602 SERPINB2P05120 415 aa14.21□□□□□ -0.13
MSH5-214ENST00000468602 ERICH6BQ5W0A0 696 aa14.21□□□□□ -0.13
MSH5-214ENST00000468602 SLC4A10Q6U841 1118 aa14.21□□□□□ -0.13
MSH5-214ENST00000468602 PANK1Q8TE04 598 aa14.21□□□□□ -0.13
MSH5-214ENST00000468602 CLUAP1Q96AJ1 413 aa14.21□□□□□ -0.13
MSH5-214ENST00000468602 ARXQ96QS3 562 aa14.21□□□□□ -0.13
MSH5-214ENST00000468602 ZBTB40Q9NUA8 1239 aa14.21□□□□□ -0.13
MSH5-214ENST00000468602 PDZRN3Q9UPQ7 1066 aa14.21□□□□□ -0.13
MSH5-214ENST00000468602 MMP10P09238 476 aa14.2□□□□□ -0.14
MSH5-214ENST00000468602 PTGER2P43116 358 aa14.2□□□□□ -0.14
MSH5-214ENST00000468602 MTX1Q13505 466 aa14.2□□□□□ -0.14
MSH5-214ENST00000468602 RABL6Q3YEC7 729 aaPredicted RBP14.2□□□□□ -0.14
MSH5-214ENST00000468602 RTL9Q8NET4 1388 aa14.2□□□□□ -0.14
MSH5-214ENST00000468602 DDX60Q8IY21 1712 aaKnown RBP14.19□□□□□ -0.14
MSH5-214ENST00000468602 C10orf71Q711Q0 1435 aa14.19□□□□□ -0.14
MSH5-214ENST00000468602 CSF1RP07333 972 aa14.19□□□□□ -0.14
MSH5-214ENST00000468602 GPTP24298 496 aa14.19□□□□□ -0.14
MSH5-214ENST00000468602 CRY2Q49AN0 593 aa14.19□□□□□ -0.14
MSH5-214ENST00000468602 PRR5LQ6MZQ0 368 aa14.19□□□□□ -0.14
MSH5-214ENST00000468602 TRMT112Q9UI30 125 aaKnown RBP14.19□□□□□ -0.14
MSH5-214ENST00000468602 PARP3Q9Y6F1 533 aa14.19□□□□□ -0.14
MSH5-214ENST00000468602 MYH3P11055 1940 aa14.18□□□□□ -0.14
MSH5-214ENST00000468602 MSH5O43196 834 aa14.18□□□□□ -0.14
MSH5-214ENST00000468602 NBPF7P0C2Y1 421 aaPredicted RBP14.18□□□□□ -0.14
MSH5-214ENST00000468602 SF3B3Q15393 1217 aaKnown RBP14.18□□□□□ -0.14
MSH5-214ENST00000468602 NBPF5PQ86XG9 351 aaPredicted RBP14.18□□□□□ -0.14
MSH5-214ENST00000468602 CNBD1Q8NA66 436 aa14.18□□□□□ -0.14
MSH5-214ENST00000468602 KAZALD1Q96I82 304 aa14.18□□□□□ -0.14
MSH5-214ENST00000468602 BRIP1Q9BX63 1249 aa14.18□□□□□ -0.14
MSH5-214ENST00000468602 C9orf78Q9NZ63 289 aaPredicted RBP14.18□□□□□ -0.14
MSH5-214ENST00000468602 COG6Q9Y2V7 657 aa14.18□□□□□ -0.14
MSH5-214ENST00000468602 PDE8AO60658 829 aa14.17□□□□□ -0.14
MSH5-214ENST00000468602 ITPRIPQ8IWB1 547 aa14.17□□□□□ -0.14
MSH5-214ENST00000468602 MEIS3Q99687 375 aa14.17□□□□□ -0.14
MSH5-214ENST00000468602 SPON1Q9HCB6 807 aa14.17□□□□□ -0.14
MSH5-214ENST00000468602 ANKRD31Q8N7Z5 1873 aa14.16□□□□□ -0.14
MSH5-214ENST00000468602 IRS4O14654 1257 aaPredicted RBP14.16□□□□□ -0.14
MSH5-214ENST00000468602 UBTFL1P0CB47 393 aaPredicted RBP14.16□□□□□ -0.14
MSH5-214ENST00000468602 POLD1P28340 1107 aa14.16□□□□□ -0.14
MSH5-214ENST00000468602 FOXO4P98177 505 aa14.16□□□□□ -0.14
MSH5-214ENST00000468602 UBE3BQ7Z3V4 1068 aa14.16□□□□□ -0.14
MSH5-214ENST00000468602 FAM89AQ96GI7 184 aa14.16□□□□□ -0.14
MSH5-214ENST00000468602 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
MSH5-214ENST00000468602 GNAI2P04899 355 aa14.15□□□□□ -0.14
MSH5-214ENST00000468602 HOXA10P31260 410 aaPredicted RBP14.15□□□□□ -0.14
MSH5-214ENST00000468602 ST5P78524 1137 aa14.15□□□□□ -0.14
MSH5-214ENST00000468602 ERFEQ4G0M1 354 aa14.15□□□□□ -0.14
MSH5-214ENST00000468602 BICDL1Q6ZP65 573 aa14.15□□□□□ -0.14
MSH5-214ENST00000468602 RPAP2Q8IXW5 612 aaPredicted RBP14.15□□□□□ -0.14
MSH5-214ENST00000468602 CD2APQ9Y5K6 639 aa14.15□□□□□ -0.14
MSH5-214ENST00000468602 CEP350Q5VT06 3117 aa14.15□□□□□ -0.14
MSH5-214ENST00000468602 ZBTB7AO95365 584 aa14.14□□□□□ -0.15
MSH5-214ENST00000468602 MSL1Q68DK7 614 aa14.14□□□□□ -0.15
MSH5-214ENST00000468602 ANKRD44Q8N8A2 993 aa14.14□□□□□ -0.15
MSH5-214ENST00000468602 CRBNQ96SW2 442 aa14.14□□□□□ -0.15
MSH5-214ENST00000468602 KIAA1551Q9HCM1 1747 aa14.13□□□□□ -0.15
MSH5-214ENST00000468602 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
MSH5-214ENST00000468602 PDE6BP35913 854 aa14.13□□□□□ -0.15
MSH5-214ENST00000468602 CTSWP56202 376 aa14.13□□□□□ -0.15
MSH5-214ENST00000468602 TGFB2P61812 414 aa14.13□□□□□ -0.15
MSH5-214ENST00000468602 TTLL11Q8NHH1 800 aa14.13□□□□□ -0.15
MSH5-214ENST00000468602 SUCLG2Q96I99 432 aa14.13□□□□□ -0.15
MSH5-214ENST00000468602 NLRP3Q96P20 1036 aa14.13□□□□□ -0.15
MSH5-214ENST00000468602 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
MSH5-214ENST00000468602 DLEC1Q9Y238 1755 aa14.13□□□□□ -0.15
MSH5-214ENST00000468602 TNRC6CQ9HCJ0 1690 aaKnown RBP14.12□□□□□ -0.15
MSH5-214ENST00000468602 C1QTNF8P60827 252 aa14.12□□□□□ -0.15
MSH5-214ENST00000468602 ATP8B2P98198 1209 aa14.12□□□□□ -0.15
MSH5-214ENST00000468602 POLA2Q14181 598 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms